RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 AMTNQ6UX39 209 aa9.57□□□□□ -0.88
SHMT2-205ENST00000553474 CRYGDP07320 174 aa9.56□□□□□ -0.88
SHMT2-205ENST00000553474 FABP2P12104 132 aa9.56□□□□□ -0.88
SHMT2-205ENST00000553474 FXYD2P54710 66 aa9.56□□□□□ -0.88
SHMT2-205ENST00000553474 PMVKQ15126 192 aa9.56□□□□□ -0.88
SHMT2-205ENST00000553474 NSUN5P1Q3KNT7 163 aa9.56□□□□□ -0.88
SHMT2-205ENST00000553474 C4orf3Q8WVX3 66 aa9.56□□□□□ -0.88
SHMT2-205ENST00000553474 CST9LQ9H4G1 147 aa9.56□□□□□ -0.88
SHMT2-205ENST00000553474 TP53TG1Q9Y2A0 90 aa9.56□□□□□ -0.88
SHMT2-205ENST00000553474 INAFM1C9JVW0 142 aa9.55□□□□□ -0.88
SHMT2-205ENST00000553474 M0QY20 66 aa9.55□□□□□ -0.88
SHMT2-205ENST00000553474 HERVK_113P61574 105 aa9.55□□□□□ -0.88
SHMT2-205ENST00000553474 SPINK13Q1W4C9 94 aa9.55□□□□□ -0.88
SHMT2-205ENST00000553474 TTTY13Q9BZ97 58 aa9.55□□□□□ -0.88
SHMT2-205ENST00000553474 A0A087WWL8 130 aa9.55□□□□□ -0.88
SHMT2-205ENST00000553474 PTH2Q96A98 100 aa9.55□□□□□ -0.88
SHMT2-205ENST00000553474 SPXQ9BT56 116 aa9.55□□□□□ -0.88
SHMT2-205ENST00000553474 MDFICQ9P1T7 246 aa9.55□□□□□ -0.88
SHMT2-205ENST00000553474 TRAV12-2A0A075B6T6 113 aa9.54□□□□□ -0.88
SHMT2-205ENST00000553474 K7ERU9 68 aa9.54□□□□□ -0.88
SHMT2-205ENST00000553474 ZNF56Q15929 161 aa9.54□□□□□ -0.88
SHMT2-205ENST00000553474 SAMD5Q5TGI4 173 aa9.54□□□□□ -0.88
SHMT2-205ENST00000553474 MAPKAPK5-AS1Q8N8E1 139 aa9.54□□□□□ -0.88
SHMT2-205ENST00000553474 HIST1H4GQ99525 98 aa9.54□□□□□ -0.88
SHMT2-205ENST00000553474 SPAG8Q99932 426 aaPredicted RBP9.54□□□□□ -0.88
SHMT2-205ENST00000553474 JPT2Q9H910 190 aa9.54□□□□□ -0.88
SHMT2-205ENST00000553474 ZNF876PQ49A33 203 aa9.53□□□□□ -0.88
SHMT2-205ENST00000553474 OCIAD2Q56VL3 154 aa9.53□□□□□ -0.88
SHMT2-205ENST00000553474 PHLDA1Q8WV24 401 aaPredicted RBP9.53□□□□□ -0.88
SHMT2-205ENST00000553474 LINC00467Q9BRT7 94 aa9.53□□□□□ -0.88
SHMT2-205ENST00000553474 SELENOKQ9Y6D0 94 aa9.53□□□□□ -0.88
SHMT2-205ENST00000553474 FN1P02751 2386 aaKnown RBP9.53□□□□□ -0.88
SHMT2-205ENST00000553474 C11orf86A6NJI1 115 aa9.52□□□□□ -0.88
SHMT2-205ENST00000553474 IGKV3-20P01619 116 aa9.52□□□□□ -0.88
SHMT2-205ENST00000553474 SCGB2A2Q13296 93 aa9.52□□□□□ -0.88
SHMT2-205ENST00000553474 FAM74A4Q5TZK3 123 aa9.52□□□□□ -0.88
SHMT2-205ENST00000553474 RAB37Q96AX2 223 aa9.52□□□□□ -0.88
SHMT2-205ENST00000553474 ZNF479Q96JC4 524 aa9.52□□□□□ -0.88
SHMT2-205ENST00000553474 DUX5Q96PT3 197 aa9.52□□□□□ -0.88
SHMT2-205ENST00000553474 PRADC1Q9BSG0 188 aa9.52□□□□□ -0.88
SHMT2-205ENST00000553474 SPCS1Q9Y6A9 102 aa9.52□□□□□ -0.88
SHMT2-205ENST00000553474 AGRNO00468 2067 aa9.52□□□□□ -0.89
SHMT2-205ENST00000553474 MXRA5Q9NR99 2828 aa9.52□□□□□ -0.89
SHMT2-205ENST00000553474 IGLV4-69A0A075B6H9 119 aa9.52□□□□□ -0.89
SHMT2-205ENST00000553474 TRBV7-3A0A075B6L6 115 aa9.52□□□□□ -0.89
SHMT2-205ENST00000553474 A0A1B0GWB2 263 aa9.52□□□□□ -0.89
SHMT2-205ENST00000553474 TSHBP01222 138 aa9.52□□□□□ -0.89
SHMT2-205ENST00000553474 NHP2Q9NX24 153 aaKnown RBP9.52□□□□□ -0.89
SHMT2-205ENST00000553474 H3BMM0 161 aa9.51□□□□□ -0.89
SHMT2-205ENST00000553474 I3L3M4 83 aa9.51□□□□□ -0.89
SHMT2-205ENST00000553474 A8MWV9 139 aa9.5□□□□□ -0.89
SHMT2-205ENST00000553474 CRYBA4P53673 196 aa9.5□□□□□ -0.89
SHMT2-205ENST00000553474 MORN3Q6PF18 240 aaPredicted RBP9.5□□□□□ -0.89
SHMT2-205ENST00000553474 NEGR1Q7Z3B1 354 aa9.5□□□□□ -0.89
SHMT2-205ENST00000553474 NFE4Q86UQ8 179 aa9.5□□□□□ -0.89
SHMT2-205ENST00000553474 ZNF815PA8K554 130 aa9.5□□□□□ -0.89
SHMT2-205ENST00000553474 SLURP1P55000 103 aa9.5□□□□□ -0.89
SHMT2-205ENST00000553474 DEFB131AP59861 70 aa9.5□□□□□ -0.89
SHMT2-205ENST00000553474 C12orf74Q32Q52 190 aa9.5□□□□□ -0.89
SHMT2-205ENST00000553474 TRAV25A0A0B4J276 109 aa9.49□□□□□ -0.89
SHMT2-205ENST00000553474 ZNF415Q09FC8 603 aa9.49□□□□□ -0.89
SHMT2-205ENST00000553474 C20orf203Q8NBC4 194 aa9.49□□□□□ -0.89
SHMT2-205ENST00000553474 PYGO1Q9Y3Y4 419 aa9.49□□□□□ -0.89
SHMT2-205ENST00000553474 M0R2P5 195 aa9.48□□□□□ -0.89
SHMT2-205ENST00000553474 RPL39P62891 51 aaKnown RBP9.48□□□□□ -0.89
SHMT2-205ENST00000553474 SCGB1D4Q6XE38 83 aa9.48□□□□□ -0.89
SHMT2-205ENST00000553474 IGLL5B9A064 214 aa9.47□□□□□ -0.89
SHMT2-205ENST00000553474 RHODO00212 210 aa9.47□□□□□ -0.89
SHMT2-205ENST00000553474 TMEM61Q8N0U2 210 aa9.47□□□□□ -0.89
SHMT2-205ENST00000553474 DYNLRB2Q8TF09 96 aa9.47□□□□□ -0.89
SHMT2-205ENST00000553474 RAX2Q96IS3 184 aa9.47□□□□□ -0.89
SHMT2-205ENST00000553474 SPANXB1Q9NS25 103 aaPredicted RBP9.47□□□□□ -0.89
SHMT2-205ENST00000553474 ANK3Q12955 4377 aaKnown RBP9.47□□□□□ -0.89
SHMT2-205ENST00000553474 SORL1Q92673 2214 aa9.47□□□□□ -0.89
SHMT2-205ENST00000553474 KNCNA6PVL3 124 aa9.46□□□□□ -0.9
SHMT2-205ENST00000553474 CRLF1O75462 422 aa9.46□□□□□ -0.9
SHMT2-205ENST00000553474 RBMY1A1P0DJD3 496 aaKnown RBP9.46□□□□□ -0.9
SHMT2-205ENST00000553474 RBMY1CP0DJD4 496 aa9.46□□□□□ -0.9
SHMT2-205ENST00000553474 RBMY1FQ15415 496 aaKnown RBP9.46□□□□□ -0.9
SHMT2-205ENST00000553474 DEFB136Q30KP8 78 aa9.46□□□□□ -0.9
SHMT2-205ENST00000553474 DEFB114Q30KQ6 69 aa9.46□□□□□ -0.9
SHMT2-205ENST00000553474 CD300EQ496F6 205 aaPredicted RBP9.46□□□□□ -0.9
SHMT2-205ENST00000553474 DUX3Q96PT4 197 aa9.46□□□□□ -0.9
SHMT2-205ENST00000553474 VPS25Q9BRG1 176 aa9.46□□□□□ -0.9
SHMT2-205ENST00000553474 MAP6D1Q9H9H5 199 aa9.46□□□□□ -0.9
SHMT2-205ENST00000553474 K7ERJ3 54 aa9.45□□□□□ -0.9
SHMT2-205ENST00000553474 P0DMU3 169 aa9.45□□□□□ -0.9
SHMT2-205ENST00000553474 FAM231AP0DMU4 169 aa9.45□□□□□ -0.9
SHMT2-205ENST00000553474 FAM231CP0DMU5 169 aa9.45□□□□□ -0.9
SHMT2-205ENST00000553474 KLHL30-AS1Q8NEE0 82 aa9.45□□□□□ -0.9
SHMT2-205ENST00000553474 DNAJC30Q96LL9 226 aa9.45□□□□□ -0.9
SHMT2-205ENST00000553474 NAA38Q9BRA0 125 aaKnown RBP9.45□□□□□ -0.9
SHMT2-205ENST00000553474 F8W1H4 67 aa9.45□□□□□ -0.9
SHMT2-205ENST00000553474 INSP01308 110 aa9.45□□□□□ -0.9
SHMT2-205ENST00000553474 SRSF9Q13242 221 aaKnown RBP eCLIP9.45□□□□□ -0.9
SHMT2-205ENST00000553474 RRN3P1Q2M238 152 aa9.45□□□□□ -0.9
SHMT2-205ENST00000553474 TMEM170BQ5T4T1 132 aa9.45□□□□□ -0.9
SHMT2-205ENST00000553474 C18orf65Q6ZTR6 163 aa9.45□□□□□ -0.9
SHMT2-205ENST00000553474 DLX4Q92988 240 aaPredicted RBP9.45□□□□□ -0.9
SHMT2-205ENST00000553474 RNF151Q2KHN1 245 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms