RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 RETNLBQ9BQ08 111 aa6.9□□□□□ -1.3
SNRPF-205ENST00000553192 WDR61Q9GZS3 305 aaKnown RBP6.9□□□□□ -1.3
SNRPF-205ENST00000553192 FABP5P3A8MUU1 101 aa6.89□□□□□ -1.31
SNRPF-205ENST00000553192 M0R036 132 aa6.89□□□□□ -1.31
SNRPF-205ENST00000553192 CRIP1P50238 77 aa6.89□□□□□ -1.31
SNRPF-205ENST00000553192 TAS2R45P59539 299 aa6.89□□□□□ -1.31
SNRPF-205ENST00000553192 GAGE2BQ13066 116 aa6.89□□□□□ -1.31
SNRPF-205ENST00000553192 ZNF56Q15929 161 aa6.89□□□□□ -1.31
SNRPF-205ENST00000553192 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.89□□□□□ -1.31
SNRPF-205ENST00000553192 CARD19Q96LW7 228 aa6.89□□□□□ -1.31
SNRPF-205ENST00000553192 SSBP4Q9BWG4 385 aaPredicted RBP6.89□□□□□ -1.31
SNRPF-205ENST00000553192 KRTAP4-8Q9BYQ9 185 aa6.89□□□□□ -1.31
SNRPF-205ENST00000553192 PKIGQ9Y2B9 76 aa6.89□□□□□ -1.31
SNRPF-205ENST00000553192 TPT1P13693 172 aaKnown RBP6.88□□□□□ -1.31
SNRPF-205ENST00000553192 PVALBP20472 110 aaPredicted RBP6.88□□□□□ -1.31
SNRPF-205ENST00000553192 SULT1A2P50226 295 aa6.88□□□□□ -1.31
SNRPF-205ENST00000553192 IL15RAQ13261 267 aa6.88□□□□□ -1.31
SNRPF-205ENST00000553192 ZFP82Q8N141 532 aa6.88□□□□□ -1.31
SNRPF-205ENST00000553192 DEDD2Q8WXF8 326 aa6.88□□□□□ -1.31
SNRPF-205ENST00000553192 KCNIP2Q9NS61 270 aa6.88□□□□□ -1.31
SNRPF-205ENST00000553192 CARHSP1Q9Y2V2 147 aaKnown RBP6.88□□□□□ -1.31
SNRPF-205ENST00000553192 TRAV6A0A075B6T7 132 aa6.87□□□□□ -1.31
SNRPF-205ENST00000553192 CRYGAP11844 174 aa6.87□□□□□ -1.31
SNRPF-205ENST00000553192 RAB32Q13637 225 aa6.87□□□□□ -1.31
SNRPF-205ENST00000553192 SAPCD1Q5SSQ6 148 aa6.87□□□□□ -1.31
SNRPF-205ENST00000553192 C5orf17Q8NAS9 161 aa6.87□□□□□ -1.31
SNRPF-205ENST00000553192 CHCHD10Q8WYQ3 142 aaPredicted RBP6.87□□□□□ -1.31
SNRPF-205ENST00000553192 RPP21Q9H633 154 aaKnown RBP6.87□□□□□ -1.31
SNRPF-205ENST00000553192 IGKV3OR2-268A0A0C4DH90 116 aa6.86□□□□□ -1.31
SNRPF-205ENST00000553192 FAM25EA8MYX2 175 aa6.86□□□□□ -1.31
SNRPF-205ENST00000553192 FOXI1Q12951 378 aa6.86□□□□□ -1.31
SNRPF-205ENST00000553192 PQLC2Q6ZP29 291 aa6.86□□□□□ -1.31
SNRPF-205ENST00000553192 SDHCQ99643 169 aaPredicted RBP6.86□□□□□ -1.31
SNRPF-205ENST00000553192 SSPOA2VEC9 5147 aa6.85□□□□□ -1.31
SNRPF-205ENST00000553192 A0A087WZ39 114 aa6.85□□□□□ -1.31
SNRPF-205ENST00000553192 K7EQM0 130 aa6.85□□□□□ -1.31
SNRPF-205ENST00000553192 EIF5AP63241 154 aaKnown RBP6.85□□□□□ -1.31
SNRPF-205ENST00000553192 SYCNQ0VAF6 134 aa6.85□□□□□ -1.31
SNRPF-205ENST00000553192 TMEM243Q9BU79 118 aa6.85□□□□□ -1.31
SNRPF-205ENST00000553192 ARL2-SNX15V9GYD0 113 aa6.85□□□□□ -1.31
SNRPF-205ENST00000553192 TMSB15BA0A087X1C1 80 aa6.84□□□□□ -1.31
SNRPF-205ENST00000553192 TRAV34A0A0B4J273 112 aa6.84□□□□□ -1.31
SNRPF-205ENST00000553192 LOC107984640A0A0U1RRK4 108 aa6.84□□□□□ -1.31
SNRPF-205ENST00000553192 C17orf112F2Z3M2 114 aa6.84□□□□□ -1.31
SNRPF-205ENST00000553192 HMGB3O15347 200 aaKnown RBP6.84□□□□□ -1.31
SNRPF-205ENST00000553192 BCL2P10415 239 aa6.84□□□□□ -1.31
SNRPF-205ENST00000553192 LORP23490 312 aaPredicted RBP6.84□□□□□ -1.31
SNRPF-205ENST00000553192 TMBIM6P55061 237 aa6.84□□□□□ -1.31
SNRPF-205ENST00000553192 PYDC2Q56P42 97 aa6.84□□□□□ -1.31
SNRPF-205ENST00000553192 MLST8Q9BVC4 326 aa6.84□□□□□ -1.31
SNRPF-205ENST00000553192 MRPS26Q9BYN8 205 aaKnown RBP6.84□□□□□ -1.31
SNRPF-205ENST00000553192 EPDR1Q9UM22 224 aa6.84□□□□□ -1.31
SNRPF-205ENST00000553192 V9GYH0 126 aa6.84□□□□□ -1.31
SNRPF-205ENST00000553192 IGLV7-46A0A075B6I9 117 aa6.83□□□□□ -1.32
SNRPF-205ENST00000553192 SH2D1AO60880 128 aa6.83□□□□□ -1.32
SNRPF-205ENST00000553192 ZNF471Q9BX82 626 aaPredicted RBP6.83□□□□□ -1.32
SNRPF-205ENST00000553192 A0A087X002 238 aa6.82□□□□□ -1.32
SNRPF-205ENST00000553192 F5H697 171 aa6.82□□□□□ -1.32
SNRPF-205ENST00000553192 RPL12P30050 165 aaKnown RBP6.82□□□□□ -1.32
SNRPF-205ENST00000553192 BTCP35070 178 aa6.82□□□□□ -1.32
SNRPF-205ENST00000553192 SUMO1P63165 101 aaKnown RBP6.82□□□□□ -1.32
SNRPF-205ENST00000553192 MT1HP80294 61 aa6.82□□□□□ -1.32
SNRPF-205ENST00000553192 ZNF674Q2M3X9 581 aa6.82□□□□□ -1.32
SNRPF-205ENST00000553192 OR10AG1Q8NH19 301 aa6.82□□□□□ -1.32
SNRPF-205ENST00000553192 SYNE2Q8WXH0 6885 aaKnown RBP6.82□□□□□ -1.32
SNRPF-205ENST00000553192 IGHV1-58A0A0C4DH39 117 aa6.81□□□□□ -1.32
SNRPF-205ENST00000553192 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.81□□□□□ -1.32
SNRPF-205ENST00000553192 MEF2BQ02080 365 aaPredicted RBP6.81□□□□□ -1.32
SNRPF-205ENST00000553192 KRTAP19-2Q3LHN2 52 aa6.81□□□□□ -1.32
SNRPF-205ENST00000553192 LINC01559Q495D7 138 aa6.81□□□□□ -1.32
SNRPF-205ENST00000553192 ASB16-AS1Q495Z4 193 aa6.81□□□□□ -1.32
SNRPF-205ENST00000553192 H3BMQ9 156 aa6.8□□□□□ -1.32
SNRPF-205ENST00000553192 ARL14EPLP0DKL9 152 aa6.8□□□□□ -1.32
SNRPF-205ENST00000553192 FGF6P10767 208 aa6.8□□□□□ -1.32
SNRPF-205ENST00000553192 RBM38Q9H0Z9 239 aaKnown RBP6.8□□□□□ -1.32
SNRPF-205ENST00000553192 USH2AO75445 5202 aa6.8□□□□□ -1.32
SNRPF-205ENST00000553192 A0A1W2PPV4 95 aa6.79□□□□□ -1.32
SNRPF-205ENST00000553192 M0QY20 66 aa6.79□□□□□ -1.32
SNRPF-205ENST00000553192 KRTAP10-6P60371 365 aaPredicted RBP6.79□□□□□ -1.32
SNRPF-205ENST00000553192 COX8CQ7Z4L0 72 aa6.79□□□□□ -1.32
SNRPF-205ENST00000553192 Q86TA4 180 aa6.79□□□□□ -1.32
SNRPF-205ENST00000553192 NUP35Q8NFH5 326 aa6.79□□□□□ -1.32
SNRPF-205ENST00000553192 MUC21A0A140T8X8 626 aa6.78□□□□□ -1.32
SNRPF-205ENST00000553192 FAM168BA1KXE4 195 aa6.78□□□□□ -1.32
SNRPF-205ENST00000553192 NAP1L6A6NFF2 107 aa6.78□□□□□ -1.32
SNRPF-205ENST00000553192 APOMO95445 188 aa6.78□□□□□ -1.32
SNRPF-205ENST00000553192 CFC1BP0CG36 223 aa6.78□□□□□ -1.32
SNRPF-205ENST00000553192 CAMPP49913 170 aa6.78□□□□□ -1.32
SNRPF-205ENST00000553192 DEFA3P59666 94 aa6.78□□□□□ -1.32
SNRPF-205ENST00000553192 FAM162BQ5T6X4 162 aa6.78□□□□□ -1.32
SNRPF-205ENST00000553192 MACF1Q9UPN3 7388 aaKnown RBP6.78□□□□□ -1.32
SNRPF-205ENST00000553192 IGLV4-69A0A075B6H9 119 aa6.77□□□□□ -1.33
SNRPF-205ENST00000553192 ZNF561-AS1K7EIQ3 104 aa6.77□□□□□ -1.33
SNRPF-205ENST00000553192 UBE2L6O14933 153 aa6.77□□□□□ -1.33
SNRPF-205ENST00000553192 STAG3L2P0CL84 134 aa6.77□□□□□ -1.33
SNRPF-205ENST00000553192 STAG3L3P0CL85 134 aa6.77□□□□□ -1.33
SNRPF-205ENST00000553192 XCL1P47992 114 aa6.77□□□□□ -1.33
SNRPF-205ENST00000553192 NKX2-5P52952 324 aaPredicted RBP6.77□□□□□ -1.33
SNRPF-205ENST00000553192 KRTAP7-1Q8IUC3 87 aa6.77□□□□□ -1.33
SNRPF-205ENST00000553192 TYMSOSQ8TAI1 123 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms