RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 LAGE3Q14657 143 aa12.56□□□□□ -0.4
HDAC4-217ENST00000553145 GTSF1Q8WW33 167 aa12.56□□□□□ -0.4
HDAC4-217ENST00000553145 SUMO4Q6EEV6 95 aa12.55□□□□□ -0.4
HDAC4-217ENST00000553145 TEX261Q6UWH6 196 aa12.55□□□□□ -0.4
HDAC4-217ENST00000553145 FAM231DQ6ZW35 169 aa12.55□□□□□ -0.4
HDAC4-217ENST00000553145 SMIM7Q9BQ49 75 aa12.55□□□□□ -0.4
HDAC4-217ENST00000553145 CNFNQ9BYD5 112 aa12.55□□□□□ -0.4
HDAC4-217ENST00000553145 LRCOL1A6NCL2 159 aa12.54□□□□□ -0.4
HDAC4-217ENST00000553145 M0QY20 66 aa12.54□□□□□ -0.4
HDAC4-217ENST00000553145 EREGO14944 169 aa12.54□□□□□ -0.4
HDAC4-217ENST00000553145 GATCO43716 136 aaKnown RBP12.54□□□□□ -0.4
HDAC4-217ENST00000553145 TRGC1P0CF51 173 aa12.54□□□□□ -0.4
HDAC4-217ENST00000553145 WDR73Q6P4I2 378 aa12.54□□□□□ -0.4
HDAC4-217ENST00000553145 TRBV6-8A0A0A6YYG3 113 aa12.53□□□□□ -0.4
HDAC4-217ENST00000553145 ZNF727A8MUV8 499 aa12.53□□□□□ -0.4
HDAC4-217ENST00000553145 PSCAO43653 123 aa12.53□□□□□ -0.4
HDAC4-217ENST00000553145 LINC01551Q86U37 167 aa12.53□□□□□ -0.4
HDAC4-217ENST00000553145 DNAJC30Q96LL9 226 aa12.53□□□□□ -0.4
HDAC4-217ENST00000553145 DPH3P1Q9H4G8 78 aa12.53□□□□□ -0.4
HDAC4-217ENST00000553145 C9JQL5 133 aa12.52□□□□□ -0.41
HDAC4-217ENST00000553145 TWIST1Q15672 202 aa12.52□□□□□ -0.41
HDAC4-217ENST00000553145 NTM-AS1Q6ZSK4 140 aa12.52□□□□□ -0.41
HDAC4-217ENST00000553145 URGCP-MRPS24S4R325 110 aa12.52□□□□□ -0.41
HDAC4-217ENST00000553145 APOBP04114 4563 aaKnown RBP12.52□□□□□ -0.41
HDAC4-217ENST00000553145 HSPG2P98160 4391 aa12.51□□□□□ -0.41
HDAC4-217ENST00000553145 SRSF3P84103 164 aaKnown RBP12.51□□□□□ -0.41
HDAC4-217ENST00000553145 PGPEP1Q9NXJ5 209 aa12.51□□□□□ -0.41
HDAC4-217ENST00000553145 H7C1H1 209 aa12.5□□□□□ -0.41
HDAC4-217ENST00000553145 CDK2AP2O75956 126 aa12.5□□□□□ -0.41
HDAC4-217ENST00000553145 CHCHD7Q9BUK0 85 aa12.5□□□□□ -0.41
HDAC4-217ENST00000553145 KRTAP17-1Q9BYP8 105 aa12.5□□□□□ -0.41
HDAC4-217ENST00000553145 KLK12Q9UKR0 248 aa12.5□□□□□ -0.41
HDAC4-217ENST00000553145 A0A087WX48 190 aa12.49□□□□□ -0.41
HDAC4-217ENST00000553145 TRAV8-3A0A0A6YYJ7 113 aa12.49□□□□□ -0.41
HDAC4-217ENST00000553145 A8MWL6 223 aa12.49□□□□□ -0.41
HDAC4-217ENST00000553145 CT83Q5H943 113 aa12.49□□□□□ -0.41
HDAC4-217ENST00000553145 CDPF1Q6NVV7 123 aa12.49□□□□□ -0.41
HDAC4-217ENST00000553145 RASL11AQ6T310 242 aa12.49□□□□□ -0.41
HDAC4-217ENST00000553145 PGLYRP4Q96LB8 373 aa12.49□□□□□ -0.41
HDAC4-217ENST00000553145 FOXA3P55318 350 aaPredicted RBP12.48□□□□□ -0.41
HDAC4-217ENST00000553145 WFDC2Q14508 124 aa12.48□□□□□ -0.41
HDAC4-217ENST00000553145 MPV17L2Q567V2 206 aa12.48□□□□□ -0.41
HDAC4-217ENST00000553145 TMEM262E9PQX1 116 aa12.47□□□□□ -0.41
HDAC4-217ENST00000553145 MAPKAPK5-AS1Q8N8E1 139 aa12.47□□□□□ -0.41
HDAC4-217ENST00000553145 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.47□□□□□ -0.41
HDAC4-217ENST00000553145 CHCHD5Q9BSY4 110 aa12.47□□□□□ -0.41
HDAC4-217ENST00000553145 TM2D2Q9BX73 214 aa12.47□□□□□ -0.41
HDAC4-217ENST00000553145 TRAV26-2A0A0B4J265 109 aa12.46□□□□□ -0.41
HDAC4-217ENST00000553145 TMEM97Q5BJF2 176 aa12.46□□□□□ -0.41
HDAC4-217ENST00000553145 Q8N814 137 aa12.46□□□□□ -0.41
HDAC4-217ENST00000553145 GATD1Q8NB37 220 aa12.46□□□□□ -0.41
HDAC4-217ENST00000553145 UBE2WQ96B02 151 aa12.46□□□□□ -0.41
HDAC4-217ENST00000553145 NIT2Q9NQR4 276 aa12.46□□□□□ -0.41
HDAC4-217ENST00000553145 OSTCQ9NRP0 149 aa12.46□□□□□ -0.41
HDAC4-217ENST00000553145 RPL23P62829 140 aaKnown RBP12.45□□□□□ -0.42
HDAC4-217ENST00000553145 TMEM241Q24JQ0 296 aa12.45□□□□□ -0.42
HDAC4-217ENST00000553145 KCNIP4Q6PIL6 250 aa12.45□□□□□ -0.42
HDAC4-217ENST00000553145 TSKUQ8WUA8 353 aa12.45□□□□□ -0.42
HDAC4-217ENST00000553145 ISOC2Q96AB3 205 aa12.45□□□□□ -0.42
HDAC4-217ENST00000553145 V9GYV3 84 aa12.45□□□□□ -0.42
HDAC4-217ENST00000553145 PCLOQ9Y6V0 5065 aa12.44□□□□□ -0.42
HDAC4-217ENST00000553145 TRBV25-1A0A075B6N4 114 aa12.44□□□□□ -0.42
HDAC4-217ENST00000553145 KRTAP10-1P60331 282 aa12.44□□□□□ -0.42
HDAC4-217ENST00000553145 ELOBQ15370 118 aa12.44□□□□□ -0.42
HDAC4-217ENST00000553145 IQCJQ1A5X6 159 aa12.44□□□□□ -0.42
HDAC4-217ENST00000553145 FAM74A3Q4VXF1 159 aa12.44□□□□□ -0.42
HDAC4-217ENST00000553145 C15orf54Q8N8G6 183 aa12.44□□□□□ -0.42
HDAC4-217ENST00000553145 Q8N976 141 aa12.44□□□□□ -0.42
HDAC4-217ENST00000553145 DEFB104AQ8WTQ1 72 aa12.44□□□□□ -0.42
HDAC4-217ENST00000553145 IGKV2D-24A0A075B6R9 120 aa12.43□□□□□ -0.42
HDAC4-217ENST00000553145 HIGD1CA8MV81 97 aa12.43□□□□□ -0.42
HDAC4-217ENST00000553145 LECT2O14960 151 aa12.43□□□□□ -0.42
HDAC4-217ENST00000553145 GAGE6Q13070 117 aa12.43□□□□□ -0.42
HDAC4-217ENST00000553145 PEA15Q15121 130 aa12.43□□□□□ -0.42
HDAC4-217ENST00000553145 ATRAIDQ6UW56 229 aa12.43□□□□□ -0.42
HDAC4-217ENST00000553145 ENHOQ6UWT2 76 aa12.43□□□□□ -0.42
HDAC4-217ENST00000553145 GFRA4Q9GZZ7 299 aa12.43□□□□□ -0.42
HDAC4-217ENST00000553145 IGHV1-24A0A0C4DH33 117 aa12.42□□□□□ -0.42
HDAC4-217ENST00000553145 ADIRFQ15847 76 aa12.42□□□□□ -0.42
HDAC4-217ENST00000553145 RMI2Q96E14 147 aa12.42□□□□□ -0.42
HDAC4-217ENST00000553145 RPL39LQ96EH5 51 aaKnown RBP12.42□□□□□ -0.42
HDAC4-217ENST00000553145 KRTAP4-5Q9BYR2 181 aa12.42□□□□□ -0.42
HDAC4-217ENST00000553145 NAT8Q9UHE5 227 aa12.42□□□□□ -0.42
HDAC4-217ENST00000553145 IGLV5-52A0A0A0MRZ9 124 aa12.41□□□□□ -0.42
HDAC4-217ENST00000553145 ANGP03950 147 aaKnown RBP12.41□□□□□ -0.42
HDAC4-217ENST00000553145 RBX1P62877 108 aa12.41□□□□□ -0.42
HDAC4-217ENST00000553145 SMIM15Q7Z3B0 74 aa12.41□□□□□ -0.42
HDAC4-217ENST00000553145 BAALCQ8WXS3 180 aa12.41□□□□□ -0.42
HDAC4-217ENST00000553145 COX11Q9Y6N1 276 aa12.41□□□□□ -0.42
HDAC4-217ENST00000553145 FAM231BA6NCW3 169 aa12.4□□□□□ -0.42
HDAC4-217ENST00000553145 GCSHP23434 173 aa12.4□□□□□ -0.42
HDAC4-217ENST00000553145 PKIAP61925 76 aa12.4□□□□□ -0.42
HDAC4-217ENST00000553145 NTN5Q8WTR8 489 aaPredicted RBP12.4□□□□□ -0.42
HDAC4-217ENST00000553145 FRZBQ92765 325 aa12.4□□□□□ -0.42
HDAC4-217ENST00000553145 BORCS7Q96B45 105 aa12.4□□□□□ -0.42
HDAC4-217ENST00000553145 SMDT1Q9H4I9 107 aa12.4□□□□□ -0.42
HDAC4-217ENST00000553145 A0A1B0GUT8 65 aa12.39□□□□□ -0.43
HDAC4-217ENST00000553145 CRPP02741 224 aa12.39□□□□□ -0.43
HDAC4-217ENST00000553145 Q0VG73 95 aa12.39□□□□□ -0.43
HDAC4-217ENST00000553145 ABCA13Q86UQ4 5058 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms