RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 ZNF345Q14585 488 aa2.56□□□□□ -2
USP44-208ENST00000552440 KPRPQ5T749 579 aaPredicted RBP2.56□□□□□ -2
USP44-208ENST00000552440 ARPINQ7Z6K5 226 aa2.56□□□□□ -2
USP44-208ENST00000552440 DMDP11532 3685 aa2.55□□□□□ -2
USP44-208ENST00000552440 FASNP49327 2511 aaKnown RBP2.55□□□□□ -2
USP44-208ENST00000552440 IGLV10-54A0A075B6I4 117 aa2.55□□□□□ -2
USP44-208ENST00000552440 E7EUB6 86 aa2.55□□□□□ -2
USP44-208ENST00000552440 CYB5AP00167 134 aa2.55□□□□□ -2
USP44-208ENST00000552440 SSR2P43308 183 aa2.55□□□□□ -2
USP44-208ENST00000552440 SPANXN1Q5VSR9 72 aa2.55□□□□□ -2
USP44-208ENST00000552440 ALKAL2Q6UX46 152 aa2.55□□□□□ -2
USP44-208ENST00000552440 PMCHL2Q9BQD1 86 aa2.55□□□□□ -2
USP44-208ENST00000552440 REG4Q9BYZ8 158 aa2.55□□□□□ -2
USP44-208ENST00000552440 THADAQ6YHU6 1953 aa2.55□□□□□ -2
USP44-208ENST00000552440 CHD7Q9P2D1 2997 aa2.55□□□□□ -2
USP44-208ENST00000552440 TPRP12270 2363 aaKnown RBP2.55□□□□□ -2
USP44-208ENST00000552440 GPR179Q6PRD1 2367 aa2.55□□□□□ -2
USP44-208ENST00000552440 COL27A1Q8IZC6 1860 aaPredicted RBP2.55□□□□□ -2
USP44-208ENST00000552440 ZNF292O60281 2723 aa2.54□□□□□ -2
USP44-208ENST00000552440 A0A087WSZ3 146 aa2.54□□□□□ -2
USP44-208ENST00000552440 A0A0J9YX75 114 aa2.54□□□□□ -2
USP44-208ENST00000552440 ADCYAP1P18509 176 aa2.54□□□□□ -2
USP44-208ENST00000552440 RBM3P98179 157 aaKnown RBP2.54□□□□□ -2
USP44-208ENST00000552440 CASC2Q6XLA1 102 aa2.54□□□□□ -2
USP44-208ENST00000552440 C15orf53Q8NAA6 179 aa2.54□□□□□ -2
USP44-208ENST00000552440 OR8B3Q8NGG8 313 aa2.54□□□□□ -2
USP44-208ENST00000552440 NDUFA12Q9UI09 145 aa2.54□□□□□ -2
USP44-208ENST00000552440 PARP14Q460N5 1801 aa2.54□□□□□ -2
USP44-208ENST00000552440 ASPMQ8IZT6 3477 aa2.54□□□□□ -2
USP44-208ENST00000552440 ACACBO00763 2458 aa2.54□□□□□ -2
USP44-208ENST00000552440 PIGBOS1A0A0B4J2F0 54 aa2.54□□□□□ -2
USP44-208ENST00000552440 IBA57-AS1B1ANH7 110 aa2.54□□□□□ -2
USP44-208ENST00000552440 MIFP14174 115 aa2.54□□□□□ -2
USP44-208ENST00000552440 DSCR10P59022 87 aa2.54□□□□□ -2
USP44-208ENST00000552440 S100A7L2Q5SY68 101 aa2.54□□□□□ -2
USP44-208ENST00000552440 COMMD6Q7Z4G1 85 aa2.54□□□□□ -2
USP44-208ENST00000552440 TMEM141Q96I45 108 aa2.54□□□□□ -2
USP44-208ENST00000552440 UQCR10Q9UDW1 63 aa2.54□□□□□ -2
USP44-208ENST00000552440 LRRC37AA6NMS7 1700 aa2.54□□□□□ -2
USP44-208ENST00000552440 DDX60LQ5H9U9 1706 aaKnown RBP2.54□□□□□ -2
USP44-208ENST00000552440 FLNBO75369 2602 aaKnown RBP2.53□□□□□ -2
USP44-208ENST00000552440 TNRC6AQ8NDV7 1962 aaKnown RBP2.53□□□□□ -2
USP44-208ENST00000552440 RIF1Q5UIP0 2472 aaKnown RBP2.53□□□□□ -2
USP44-208ENST00000552440 PSME4Q14997 1843 aa2.53□□□□□ -2
USP44-208ENST00000552440 MALRD1Q5VYJ5 2156 aa2.53□□□□□ -2
USP44-208ENST00000552440 NCOR2Q9Y618 2525 aa2.53□□□□□ -2
USP44-208ENST00000552440 IGLC7A0M8Q6 106 aa2.53□□□□□ -2
USP44-208ENST00000552440 SFT2D2O95562 160 aa2.53□□□□□ -2
USP44-208ENST00000552440 IGKCP01834 107 aa2.53□□□□□ -2
USP44-208ENST00000552440 CCKP06307 115 aa2.53□□□□□ -2
USP44-208ENST00000552440 CBLN1P23435 193 aa2.53□□□□□ -2
USP44-208ENST00000552440 LINC00483Q53H64 154 aa2.53□□□□□ -2
USP44-208ENST00000552440 LCE3CQ5T5A8 94 aa2.53□□□□□ -2
USP44-208ENST00000552440 TMEM136Q6ZRR5 245 aa2.53□□□□□ -2
USP44-208ENST00000552440 HMGN2P46Q86SG4 172 aa2.53□□□□□ -2
USP44-208ENST00000552440 TMEM254Q8TBM7 123 aa2.53□□□□□ -2
USP44-208ENST00000552440 TSLPQ969D9 159 aa2.53□□□□□ -2
USP44-208ENST00000552440 RPS10P5Q9NQ39 176 aa2.53□□□□□ -2
USP44-208ENST00000552440 KLK12Q9UKR0 248 aa2.53□□□□□ -2
USP44-208ENST00000552440 DOCK9Q9BZ29 2069 aa2.53□□□□□ -2
USP44-208ENST00000552440 ASH1LQ9NR48 2969 aaKnown RBP2.53□□□□□ -2
USP44-208ENST00000552440 TRIOO75962 3097 aa2.53□□□□□ -2.01
USP44-208ENST00000552440 DDX60Q8IY21 1712 aaKnown RBP2.53□□□□□ -2.01
USP44-208ENST00000552440 LAMB2P55268 1798 aa2.52□□□□□ -2.01
USP44-208ENST00000552440 IGLV2-18A0A075B6J9 118 aa2.52□□□□□ -2.01
USP44-208ENST00000552440 TRAV2A0A0B4J234 112 aa2.52□□□□□ -2.01
USP44-208ENST00000552440 hADV29S1A0JD25 119 aa2.52□□□□□ -2.01
USP44-208ENST00000552440 HMSDA8MTL9 139 aa2.52□□□□□ -2.01
USP44-208ENST00000552440 APOC3P02656 99 aa2.52□□□□□ -2.01
USP44-208ENST00000552440 NDPQ00604 133 aa2.52□□□□□ -2.01
USP44-208ENST00000552440 Q1T7F1 81 aa2.52□□□□□ -2.01
USP44-208ENST00000552440 Q5BKY6 102 aa2.52□□□□□ -2.01
USP44-208ENST00000552440 S100A16Q96FQ6 103 aaKnown RBP2.52□□□□□ -2.01
USP44-208ENST00000552440 C20orf78Q9BR46 151 aa2.52□□□□□ -2.01
USP44-208ENST00000552440 KIF25-AS1Q9Y6Z4 181 aa2.52□□□□□ -2.01
USP44-208ENST00000552440 MAST4O15021 2626 aa2.52□□□□□ -2.01
USP44-208ENST00000552440 DMXL1Q9Y485 3027 aa2.52□□□□□ -2.01
USP44-208ENST00000552440 MYLKQ15746 1914 aa2.52□□□□□ -2.01
USP44-208ENST00000552440 CACNA1HO95180 2353 aa2.52□□□□□ -2.01
USP44-208ENST00000552440 CHD3Q12873 2000 aaKnown RBP2.52□□□□□ -2.01
USP44-208ENST00000552440 CCDC88CQ9P219 2028 aa2.52□□□□□ -2.01
USP44-208ENST00000552440 IGKV1D-17A0A075B6S4 117 aa2.52□□□□□ -2.01
USP44-208ENST00000552440 TRBV7-7A0A0K0K1E9 115 aa2.52□□□□□ -2.01
USP44-208ENST00000552440 IL9P15248 144 aa2.52□□□□□ -2.01
USP44-208ENST00000552440 RHOHQ15669 191 aa2.52□□□□□ -2.01
USP44-208ENST00000552440 SPINT4Q6UDR6 99 aa2.52□□□□□ -2.01
USP44-208ENST00000552440 HIGD2AQ9BW72 106 aa2.52□□□□□ -2.01
USP44-208ENST00000552440 SCRT1Q9BWW7 348 aa2.52□□□□□ -2.01
USP44-208ENST00000552440 SMCO4Q9NRQ5 59 aa2.52□□□□□ -2.01
USP44-208ENST00000552440 ANKRD36CQ5JPF3 1778 aa2.51□□□□□ -2.01
USP44-208ENST00000552440 VPS13AQ96RL7 3174 aa2.51□□□□□ -2.01
USP44-208ENST00000552440 LTBP2Q14767 1821 aa2.51□□□□□ -2.01
USP44-208ENST00000552440 FAM186AA6NE01 2351 aa2.51□□□□□ -2.01
USP44-208ENST00000552440 FAM208BQ5VWN6 2430 aa2.51□□□□□ -2.01
USP44-208ENST00000552440 LRRC37A2A6NM11 1700 aa2.51□□□□□ -2.01
USP44-208ENST00000552440 CPAMD8Q8IZJ3 1885 aa2.51□□□□□ -2.01
USP44-208ENST00000552440 IGKV3D-11A0A0A0MRZ8 115 aa2.51□□□□□ -2.01
USP44-208ENST00000552440 ATOX1O00244 68 aa2.51□□□□□ -2.01
USP44-208ENST00000552440 PSCAO43653 123 aa2.51□□□□□ -2.01
USP44-208ENST00000552440 UBE2G1P62253 170 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms