RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 KNTC1P50748 2209 aa0.99□□□□□ -2.25
LSM6P2-201ENST00000552208 MYOM2P54296 1465 aa0.99□□□□□ -2.25
LSM6P2-201ENST00000552208 TRBV7-1A0A0A6YYK4 115 aa0.98□□□□□ -2.25
LSM6P2-201ENST00000552208 APOC4-APOC2K7ER74 178 aa0.98□□□□□ -2.25
LSM6P2-201ENST00000552208 APOC2P02655 101 aa0.98□□□□□ -2.25
LSM6P2-201ENST00000552208 CATR1Q13166 79 aa0.98□□□□□ -2.25
LSM6P2-201ENST00000552208 Q96NJ1 140 aa0.98□□□□□ -2.25
LSM6P2-201ENST00000552208 HCG22E2RYF7 251 aa0.97□□□□□ -2.25
LSM6P2-201ENST00000552208 SIX6O95475 246 aa0.97□□□□□ -2.25
LSM6P2-201ENST00000552208 GNG4P50150 75 aa0.97□□□□□ -2.25
LSM6P2-201ENST00000552208 GNG8Q9UK08 70 aa0.97□□□□□ -2.25
LSM6P2-201ENST00000552208 IER3IP1Q9Y5U9 82 aa0.97□□□□□ -2.25
LSM6P2-201ENST00000552208 KDM6BO15054 1643 aa0.97□□□□□ -2.25
LSM6P2-201ENST00000552208 SPEF2Q9C093 1822 aa0.96□□□□□ -2.26
LSM6P2-201ENST00000552208 NRXN2Q9P2S2 1712 aa0.96□□□□□ -2.26
LSM6P2-201ENST00000552208 TRAV13-2A0A0B4J235 113 aa0.96□□□□□ -2.26
LSM6P2-201ENST00000552208 OOSP1A8MZH6 123 aa0.96□□□□□ -2.26
LSM6P2-201ENST00000552208 ZNF137PP52743 207 aa0.96□□□□□ -2.26
LSM6P2-201ENST00000552208 EDDM3BP56851 147 aa0.96□□□□□ -2.26
LSM6P2-201ENST00000552208 FXYD6P3P58550 94 aa0.96□□□□□ -2.26
LSM6P2-201ENST00000552208 TPPP2P59282 170 aa0.96□□□□□ -2.26
LSM6P2-201ENST00000552208 FAM74A4Q5TZK3 123 aa0.96□□□□□ -2.26
LSM6P2-201ENST00000552208 LINC00312Q9Y6C7 94 aa0.96□□□□□ -2.26
LSM6P2-201ENST00000552208 V9GYV3 84 aa0.96□□□□□ -2.26
LSM6P2-201ENST00000552208 KTN1Q86UP2 1357 aaKnown RBP0.96□□□□□ -2.26
LSM6P2-201ENST00000552208 PLXNA1Q9UIW2 1896 aa0.95□□□□□ -2.26
LSM6P2-201ENST00000552208 PXDNQ92626 1479 aa0.95□□□□□ -2.26
LSM6P2-201ENST00000552208 WHAMMP3Q1A5X7 153 aa0.95□□□□□ -2.26
LSM6P2-201ENST00000552208 C6orf52Q5T4I8 152 aa0.95□□□□□ -2.26
LSM6P2-201ENST00000552208 PPP3R2Q96LZ3 170 aa0.95□□□□□ -2.26
LSM6P2-201ENST00000552208 PKD1L2Q7Z442 2459 aa0.95□□□□□ -2.26
LSM6P2-201ENST00000552208 ABCA1O95477 2261 aa0.95□□□□□ -2.26
LSM6P2-201ENST00000552208 MYH7P12883 1935 aa0.95□□□□□ -2.26
LSM6P2-201ENST00000552208 CUL7Q14999 1698 aa0.94□□□□□ -2.26
LSM6P2-201ENST00000552208 RIMS1Q86UR5 1692 aaKnown RBP0.94□□□□□ -2.26
LSM6P2-201ENST00000552208 PHIPQ8WWQ0 1821 aa0.94□□□□□ -2.26
LSM6P2-201ENST00000552208 PIGBOS1A0A0B4J2F0 54 aa0.94□□□□□ -2.26
LSM6P2-201ENST00000552208 SNAPC5O75971 98 aa0.94□□□□□ -2.26
LSM6P2-201ENST00000552208 MRPL54Q6P161 138 aaKnown RBP0.94□□□□□ -2.26
LSM6P2-201ENST00000552208 CPSF1Q10570 1443 aaKnown RBP0.94□□□□□ -2.26
LSM6P2-201ENST00000552208 ZNF462Q96JM2 2506 aa0.94□□□□□ -2.26
LSM6P2-201ENST00000552208 RBBP6Q7Z6E9 1792 aaKnown RBP0.93□□□□□ -2.26
LSM6P2-201ENST00000552208 S100PP25815 95 aa0.93□□□□□ -2.26
LSM6P2-201ENST00000552208 PPP3R1P63098 170 aa0.93□□□□□ -2.26
LSM6P2-201ENST00000552208 MRPS10P82664 201 aaKnown RBP0.93□□□□□ -2.26
LSM6P2-201ENST00000552208 C9orf153Q5TBE3 101 aa0.93□□□□□ -2.26
LSM6P2-201ENST00000552208 C5orf38Q86SI9 138 aa0.93□□□□□ -2.26
LSM6P2-201ENST00000552208 C8orf59Q8N0T1 100 aaPredicted RBP0.93□□□□□ -2.26
LSM6P2-201ENST00000552208 SPANXDQ9BXN6 97 aa0.93□□□□□ -2.26
LSM6P2-201ENST00000552208 CACNA1AO00555 2505 aa0.93□□□□□ -2.26
LSM6P2-201ENST00000552208 PZPP20742 1482 aa0.92□□□□□ -2.26
LSM6P2-201ENST00000552208 MAP2P11137 1827 aaKnown RBP0.92□□□□□ -2.26
LSM6P2-201ENST00000552208 S100A1P23297 94 aa0.92□□□□□ -2.26
LSM6P2-201ENST00000552208 WFDC6Q9BQY6 131 aa0.92□□□□□ -2.26
LSM6P2-201ENST00000552208 LRRC37A3O60309 1634 aa0.92□□□□□ -2.26
LSM6P2-201ENST00000552208 CDK13Q14004 1512 aaKnown RBP0.91□□□□□ -2.26
LSM6P2-201ENST00000552208 MED13LQ71F56 2210 aa0.91□□□□□ -2.26
LSM6P2-201ENST00000552208 GVQW2A0A096LPI5 108 aaPredicted RBP0.91□□□□□ -2.26
LSM6P2-201ENST00000552208 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.91□□□□□ -2.26
LSM6P2-201ENST00000552208 C10orf95Q9H7T3 257 aa0.91□□□□□ -2.26
LSM6P2-201ENST00000552208 MYH9P35579 1960 aaKnown RBP0.9□□□□□ -2.26
LSM6P2-201ENST00000552208 COMMD6Q7Z4G1 85 aa0.9□□□□□ -2.27
LSM6P2-201ENST00000552208 C14orf144Q96I85 54 aa0.9□□□□□ -2.27
LSM6P2-201ENST00000552208 FAM103A1Q9BTL3 118 aaKnown RBP0.9□□□□□ -2.27
LSM6P2-201ENST00000552208 BPESC1Q9GZL8 116 aa0.9□□□□□ -2.27
LSM6P2-201ENST00000552208 ANK2Q01484 3957 aa0.9□□□□□ -2.27
LSM6P2-201ENST00000552208 FRAS1Q86XX4 4008 aa0.9□□□□□ -2.27
LSM6P2-201ENST00000552208 PPIP5K1Q6PFW1 1433 aa0.89□□□□□ -2.27
LSM6P2-201ENST00000552208 SSC5DA1L4H1 1573 aa0.89□□□□□ -2.27
LSM6P2-201ENST00000552208 TRGV1A0A0A0MS02 117 aa0.89□□□□□ -2.27
LSM6P2-201ENST00000552208 AQP10Q96PS8 301 aa0.89□□□□□ -2.27
LSM6P2-201ENST00000552208 JMJD1CQ15652 2540 aa0.89□□□□□ -2.27
LSM6P2-201ENST00000552208 ARAP2Q8WZ64 1704 aa0.89□□□□□ -2.27
LSM6P2-201ENST00000552208 FBN2P35556 2912 aa0.88□□□□□ -2.27
LSM6P2-201ENST00000552208 TANC1Q9C0D5 1861 aa0.88□□□□□ -2.27
LSM6P2-201ENST00000552208 ROBO1Q9Y6N7 1651 aa0.88□□□□□ -2.27
LSM6P2-201ENST00000552208 MEGF8Q7Z7M0 2845 aa0.88□□□□□ -2.27
LSM6P2-201ENST00000552208 SSSCA1O60232 199 aa0.88□□□□□ -2.27
LSM6P2-201ENST00000552208 CCL18P55774 89 aa0.88□□□□□ -2.27
LSM6P2-201ENST00000552208 C10orf128Q5T292 105 aa0.88□□□□□ -2.27
LSM6P2-201ENST00000552208 TTC9CQ8N5M4 171 aa0.88□□□□□ -2.27
LSM6P2-201ENST00000552208 SMIM11BQ8TCY0 68 aa0.88□□□□□ -2.27
LSM6P2-201ENST00000552208 CYP4F30PQ9H0H9 118 aa0.88□□□□□ -2.27
LSM6P2-201ENST00000552208 LINC00474Q9P2X8 69 aa0.88□□□□□ -2.27
LSM6P2-201ENST00000552208 NWD2Q9ULI1 1742 aa0.88□□□□□ -2.27
LSM6P2-201ENST00000552208 SHROOM2Q13796 1616 aa0.88□□□□□ -2.27
LSM6P2-201ENST00000552208 SIPA1L3O60292 1781 aaPredicted RBP0.88□□□□□ -2.27
LSM6P2-201ENST00000552208 C20orf202A1L168 122 aa0.87□□□□□ -2.27
LSM6P2-201ENST00000552208 F2Z2F3 143 aa0.87□□□□□ -2.27
LSM6P2-201ENST00000552208 ACYP2P14621 99 aa0.87□□□□□ -2.27
LSM6P2-201ENST00000552208 Q5VV11 94 aa0.87□□□□□ -2.27
LSM6P2-201ENST00000552208 VMO1Q7Z5L0 202 aa0.87□□□□□ -2.27
LSM6P2-201ENST00000552208 C12orf57Q99622 126 aa0.87□□□□□ -2.27
LSM6P2-201ENST00000552208 DPH3P1Q9H4G8 78 aa0.87□□□□□ -2.27
LSM6P2-201ENST00000552208 MAPKBP1O60336 1514 aa0.87□□□□□ -2.27
LSM6P2-201ENST00000552208 ZMYM4Q5VZL5 1548 aa0.87□□□□□ -2.27
LSM6P2-201ENST00000552208 C10orf71Q711Q0 1435 aa0.87□□□□□ -2.27
LSM6P2-201ENST00000552208 NRKQ7Z2Y5 1582 aa0.87□□□□□ -2.27
LSM6P2-201ENST00000552208 F5P12259 2224 aa0.87□□□□□ -2.27
LSM6P2-201ENST00000552208 UBE2L5PA0A1B0GUS4 154 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 182.3 ms