RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 PRYO14603 147 aa4.38□□□□□ -1.71
PRPF40B-214ENST00000551320 CXorf1O96002 111 aa4.38□□□□□ -1.71
PRPF40B-214ENST00000551320 ANGP03950 147 aaKnown RBP4.38□□□□□ -1.71
PRPF40B-214ENST00000551320 FHITP49789 147 aa4.38□□□□□ -1.71
PRPF40B-214ENST00000551320 UBE2D3P61077 147 aa4.38□□□□□ -1.71
PRPF40B-214ENST00000551320 UBE2D2P62837 147 aa4.38□□□□□ -1.71
PRPF40B-214ENST00000551320 ZFP2Q6ZN57 461 aa4.38□□□□□ -1.71
PRPF40B-214ENST00000551320 NTM-AS1Q6ZSK4 140 aa4.38□□□□□ -1.71
PRPF40B-214ENST00000551320 NEXN-AS1Q8NBZ9 246 aa4.38□□□□□ -1.71
PRPF40B-214ENST00000551320 OR11H4Q8NGC9 324 aa4.38□□□□□ -1.71
PRPF40B-214ENST00000551320 OR10AG1Q8NH19 301 aa4.38□□□□□ -1.71
PRPF40B-214ENST00000551320 SFRP2Q96HF1 295 aa4.38□□□□□ -1.71
PRPF40B-214ENST00000551320 PHLDA3Q9Y5J5 127 aa4.38□□□□□ -1.71
PRPF40B-214ENST00000551320 FAM74A7A6NL05 159 aa4.37□□□□□ -1.71
PRPF40B-214ENST00000551320 SMLR1H3BR10 107 aa4.37□□□□□ -1.71
PRPF40B-214ENST00000551320 PTTG1O95997 202 aa4.37□□□□□ -1.71
PRPF40B-214ENST00000551320 OXTP01178 125 aa4.37□□□□□ -1.71
PRPF40B-214ENST00000551320 SAPCD1Q5SSQ6 148 aa4.37□□□□□ -1.71
PRPF40B-214ENST00000551320 ATRAIDQ6UW56 229 aa4.37□□□□□ -1.71
PRPF40B-214ENST00000551320 LINC00269Q8N2A0 174 aa4.37□□□□□ -1.71
PRPF40B-214ENST00000551320 PTH2Q96A98 100 aa4.37□□□□□ -1.71
PRPF40B-214ENST00000551320 CHCHD5Q9BSY4 110 aa4.37□□□□□ -1.71
PRPF40B-214ENST00000551320 ACTR3CQ9C0K3 210 aaPredicted RBP4.37□□□□□ -1.71
PRPF40B-214ENST00000551320 GFRA4Q9GZZ7 299 aa4.37□□□□□ -1.71
PRPF40B-214ENST00000551320 IL36BQ9NZH7 164 aa4.37□□□□□ -1.71
PRPF40B-214ENST00000551320 A0A087WWC5 75 aa4.36□□□□□ -1.71
PRPF40B-214ENST00000551320 FXYD6-FXYD2A0A087WZ82 144 aa4.36□□□□□ -1.71
PRPF40B-214ENST00000551320 PET100P0DJ07 73 aa4.36□□□□□ -1.71
PRPF40B-214ENST00000551320 GZMBP10144 247 aa4.36□□□□□ -1.71
PRPF40B-214ENST00000551320 TPT1P13693 172 aaKnown RBP4.36□□□□□ -1.71
PRPF40B-214ENST00000551320 ZNF56Q15929 161 aa4.36□□□□□ -1.71
PRPF40B-214ENST00000551320 CST9LP1Q5W188 147 aa4.36□□□□□ -1.71
PRPF40B-214ENST00000551320 DGAT2L7PQ6IED9 249 aa4.36□□□□□ -1.71
PRPF40B-214ENST00000551320 KRTAP26-1Q6PEX3 210 aa4.36□□□□□ -1.71
PRPF40B-214ENST00000551320 INO80EQ8NBZ0 244 aaPredicted RBP4.36□□□□□ -1.71
PRPF40B-214ENST00000551320 S100ZQ8WXG8 99 aa4.36□□□□□ -1.71
PRPF40B-214ENST00000551320 RMI2Q96E14 147 aa4.36□□□□□ -1.71
PRPF40B-214ENST00000551320 TMEM167BQ9NRX6 74 aa4.36□□□□□ -1.71
PRPF40B-214ENST00000551320 COX11Q9Y6N1 276 aa4.36□□□□□ -1.71
PRPF40B-214ENST00000551320 TRBV7-3A0A075B6L6 115 aa4.35□□□□□ -1.71
PRPF40B-214ENST00000551320 TRBV6-8A0A0A6YYG3 113 aa4.35□□□□□ -1.71
PRPF40B-214ENST00000551320 SERTM2A0A1B0GWG4 89 aa4.35□□□□□ -1.71
PRPF40B-214ENST00000551320 CIDEAO60543 219 aa4.35□□□□□ -1.71
PRPF40B-214ENST00000551320 CRPP02741 224 aa4.35□□□□□ -1.71
PRPF40B-214ENST00000551320 RBX1P62877 108 aa4.35□□□□□ -1.71
PRPF40B-214ENST00000551320 RPL36AP83881 106 aaKnown RBP4.35□□□□□ -1.71
PRPF40B-214ENST00000551320 FAM162BQ5T6X4 162 aa4.35□□□□□ -1.71
PRPF40B-214ENST00000551320 PRR27Q6MZM9 219 aa4.35□□□□□ -1.71
PRPF40B-214ENST00000551320 SDIM1Q6ZPB5 146 aa4.35□□□□□ -1.71
PRPF40B-214ENST00000551320 ARL6IP6Q8N6S5 226 aa4.35□□□□□ -1.71
PRPF40B-214ENST00000551320 RPL36ALQ969Q0 106 aaKnown RBP4.35□□□□□ -1.71
PRPF40B-214ENST00000551320 DPH3Q96FX2 82 aa4.35□□□□□ -1.71
PRPF40B-214ENST00000551320 AQP10Q96PS8 301 aa4.35□□□□□ -1.71
PRPF40B-214ENST00000551320 PSMG3Q9BT73 122 aaPredicted RBP4.35□□□□□ -1.71
PRPF40B-214ENST00000551320 ZNF471Q9BX82 626 aaPredicted RBP4.35□□□□□ -1.71
PRPF40B-214ENST00000551320 IGLV4-60A0A075B6I1 120 aa4.34□□□□□ -1.71
PRPF40B-214ENST00000551320 IGKV3OR2-268A0A0C4DH90 116 aa4.34□□□□□ -1.71
PRPF40B-214ENST00000551320 A0A1W2PRE2 83 aa4.34□□□□□ -1.71
PRPF40B-214ENST00000551320 MAP1LC3B2A6NCE7 125 aa4.34□□□□□ -1.71
PRPF40B-214ENST00000551320 PAGE4O60829 102 aa4.34□□□□□ -1.71
PRPF40B-214ENST00000551320 UBE2G1P62253 170 aa4.34□□□□□ -1.71
PRPF40B-214ENST00000551320 ZNF674Q2M3X9 581 aa4.34□□□□□ -1.71
PRPF40B-214ENST00000551320 KCNIP4Q6PIL6 250 aa4.34□□□□□ -1.71
PRPF40B-214ENST00000551320 LYPD6BQ8NI32 183 aa4.34□□□□□ -1.71
PRPF40B-214ENST00000551320 DERL1Q9BUN8 251 aa4.34□□□□□ -1.71
PRPF40B-214ENST00000551320 TPPP3Q9BW30 176 aa4.34□□□□□ -1.71
PRPF40B-214ENST00000551320 MAP1LC3BQ9GZQ8 125 aa4.34□□□□□ -1.71
PRPF40B-214ENST00000551320 NDUFA13Q9P0J0 144 aa4.34□□□□□ -1.71
PRPF40B-214ENST00000551320 TNFSF18Q9UNG2 199 aa4.34□□□□□ -1.71
PRPF40B-214ENST00000551320 A0A087WYN8 130 aa4.33□□□□□ -1.72
PRPF40B-214ENST00000551320 CTXND1A0A1B0GTU2 59 aa4.33□□□□□ -1.72
PRPF40B-214ENST00000551320 hDV102S1A0JD36 115 aa4.33□□□□□ -1.72
PRPF40B-214ENST00000551320 G3V3Q6 166 aa4.33□□□□□ -1.72
PRPF40B-214ENST00000551320 RHODO00212 210 aa4.33□□□□□ -1.72
PRPF40B-214ENST00000551320 PHOX2AO14813 284 aa4.33□□□□□ -1.72
PRPF40B-214ENST00000551320 LTAP01374 205 aa4.33□□□□□ -1.72
PRPF40B-214ENST00000551320 MGPP08493 103 aa4.33□□□□□ -1.72
PRPF40B-214ENST00000551320 AKR1C3P42330 323 aa4.33□□□□□ -1.72
PRPF40B-214ENST00000551320 PCP4P48539 62 aa4.33□□□□□ -1.72
PRPF40B-214ENST00000551320 SERF2P84101 59 aa4.33□□□□□ -1.72
PRPF40B-214ENST00000551320 ZFP82Q8N141 532 aa4.33□□□□□ -1.72
PRPF40B-214ENST00000551320 C9orf163Q8N9P6 203 aa4.33□□□□□ -1.72
PRPF40B-214ENST00000551320 LINC00526Q96FQ7 95 aa4.33□□□□□ -1.72
PRPF40B-214ENST00000551320 MED28Q9H204 178 aa4.33□□□□□ -1.72
PRPF40B-214ENST00000551320 CYTL1Q9NRR1 136 aa4.33□□□□□ -1.72
PRPF40B-214ENST00000551320 LPAP08519 4548 aa4.32□□□□□ -1.72
PRPF40B-214ENST00000551320 IGKV2-24A0A0C4DH68 120 aa4.32□□□□□ -1.72
PRPF40B-214ENST00000551320 MBP02144 154 aa4.32□□□□□ -1.72
PRPF40B-214ENST00000551320 NKX2-5P52952 324 aaPredicted RBP4.32□□□□□ -1.72
PRPF40B-214ENST00000551320 Q0VG73 95 aa4.32□□□□□ -1.72
PRPF40B-214ENST00000551320 ELOBQ15370 118 aa4.32□□□□□ -1.72
PRPF40B-214ENST00000551320 HIGD2BQ4VC39 106 aa4.32□□□□□ -1.72
PRPF40B-214ENST00000551320 DNLZQ5SXM8 178 aa4.32□□□□□ -1.72
PRPF40B-214ENST00000551320 AKR1C8PQ5T2L2 129 aa4.32□□□□□ -1.72
PRPF40B-214ENST00000551320 C20orf203Q8NBC4 194 aa4.32□□□□□ -1.72
PRPF40B-214ENST00000551320 OR10G8Q8NGN5 311 aa4.32□□□□□ -1.72
PRPF40B-214ENST00000551320 KIF25-AS1Q9Y6Z4 181 aa4.32□□□□□ -1.72
PRPF40B-214ENST00000551320 TRBV10-1A0A0K0K1A3 114 aa4.31□□□□□ -1.72
PRPF40B-214ENST00000551320 TRBV6-1A0A0K0K1D8 114 aa4.31□□□□□ -1.72
PRPF40B-214ENST00000551320 ARPC5O15511 151 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms