RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 TMSB15BA0A087X1C1 80 aa2.56□□□□□ -2
APAF1-208ENST00000549007 RBFOX3A6NFN3 312 aa2.56□□□□□ -2
APAF1-208ENST00000549007 M0R036 132 aa2.56□□□□□ -2
APAF1-208ENST00000549007 INSP01308 110 aa2.56□□□□□ -2
APAF1-208ENST00000549007 UBE2G1P62253 170 aa2.56□□□□□ -2
APAF1-208ENST00000549007 MEF2BQ02080 365 aaPredicted RBP2.56□□□□□ -2
APAF1-208ENST00000549007 LINC01587Q99440 93 aa2.56□□□□□ -2
APAF1-208ENST00000549007 MANBALQ9NQG1 85 aa2.56□□□□□ -2
APAF1-208ENST00000549007 TRBV20OR9-2A0A075B6H5 130 aa2.56□□□□□ -2
APAF1-208ENST00000549007 A8MTW9 85 aa2.56□□□□□ -2
APAF1-208ENST00000549007 GCGP01275 180 aa2.56□□□□□ -2
APAF1-208ENST00000549007 IFNA1P01562 189 aa2.56□□□□□ -2
APAF1-208ENST00000549007 RPL35P42766 123 aaKnown RBP2.56□□□□□ -2
APAF1-208ENST00000549007 ZC2HC1AQ96GY0 325 aa2.56□□□□□ -2
APAF1-208ENST00000549007 IGF2BP2-AS1Q96M15 143 aa2.56□□□□□ -2
APAF1-208ENST00000549007 LINC00477Q96M19 166 aa2.56□□□□□ -2
APAF1-208ENST00000549007 PYGO2Q9BRQ0 406 aa2.56□□□□□ -2
APAF1-208ENST00000549007 NKX6-2Q9C056 277 aaPredicted RBP2.56□□□□□ -2
APAF1-208ENST00000549007 CELA1Q9UNI1 258 aa2.56□□□□□ -2
APAF1-208ENST00000549007 CARHSP1Q9Y2V2 147 aaKnown RBP2.56□□□□□ -2
APAF1-208ENST00000549007 TIMM8BQ9Y5J9 83 aaPredicted RBP2.56□□□□□ -2
APAF1-208ENST00000549007 TMEM218A2RU14 115 aa2.55□□□□□ -2
APAF1-208ENST00000549007 C7orf71A4D174 169 aa2.55□□□□□ -2
APAF1-208ENST00000549007 APOC3P02656 99 aa2.55□□□□□ -2
APAF1-208ENST00000549007 MGST1P10620 155 aaKnown RBP2.55□□□□□ -2
APAF1-208ENST00000549007 DSCR10P59022 87 aa2.55□□□□□ -2
APAF1-208ENST00000549007 RPL19P84098 196 aaKnown RBP2.55□□□□□ -2
APAF1-208ENST00000549007 CENPWQ5EE01 88 aa2.55□□□□□ -2
APAF1-208ENST00000549007 MORN3Q6PF18 240 aaPredicted RBP2.55□□□□□ -2
APAF1-208ENST00000549007 FAM19A4Q96LR4 140 aa2.55□□□□□ -2
APAF1-208ENST00000549007 VAX2Q9UIW0 290 aa2.55□□□□□ -2
APAF1-208ENST00000549007 U3KQK5 164 aa2.55□□□□□ -2
APAF1-208ENST00000549007 MUC21A0A0G2JKD1 596 aa2.55□□□□□ -2
APAF1-208ENST00000549007 MUC21A0A140T8X8 626 aa2.55□□□□□ -2
APAF1-208ENST00000549007 GRIFINA4D1Z8 144 aa2.55□□□□□ -2
APAF1-208ENST00000549007 KLLNB2CW77 178 aa2.55□□□□□ -2
APAF1-208ENST00000549007 TSPOP30536 169 aa2.55□□□□□ -2
APAF1-208ENST00000549007 CTRLP40313 264 aa2.55□□□□□ -2
APAF1-208ENST00000549007 TMEM183BQ1AE95 376 aa2.55□□□□□ -2
APAF1-208ENST00000549007 BAGE2Q86Y30 109 aa2.55□□□□□ -2
APAF1-208ENST00000549007 TMEM183AQ8IXX5 376 aa2.55□□□□□ -2
APAF1-208ENST00000549007 SVBPQ8N300 66 aa2.55□□□□□ -2
APAF1-208ENST00000549007 C14orf178Q8N769 122 aaPredicted RBP2.55□□□□□ -2
APAF1-208ENST00000549007 HIST1H2BAQ96A08 127 aa2.55□□□□□ -2
APAF1-208ENST00000549007 RBAKDNA6NC62 111 aa2.55□□□□□ -2
APAF1-208ENST00000549007 GNRH2O43555 120 aa2.55□□□□□ -2
APAF1-208ENST00000549007 SNAI2O43623 268 aa2.55□□□□□ -2
APAF1-208ENST00000549007 SRP19P09132 144 aaKnown RBP2.55□□□□□ -2
APAF1-208ENST00000549007 CRIP1P50238 77 aa2.55□□□□□ -2
APAF1-208ENST00000549007 CTAG1AP78358 180 aa2.55□□□□□ -2
APAF1-208ENST00000549007 RNF212Q495C1 297 aa2.55□□□□□ -2
APAF1-208ENST00000549007 ZFAND6Q6FIF0 208 aa2.55□□□□□ -2
APAF1-208ENST00000549007 ZNF705AQ6ZN79 300 aaPredicted RBP2.55□□□□□ -2
APAF1-208ENST00000549007 Q8NAQ8 132 aa2.55□□□□□ -2
APAF1-208ENST00000549007 NDFIP1Q9BT67 221 aa2.55□□□□□ -2
APAF1-208ENST00000549007 SH2D1AO60880 128 aa2.54□□□□□ -2
APAF1-208ENST00000549007 ZNF324O75467 553 aaPredicted RBP2.54□□□□□ -2
APAF1-208ENST00000549007 LTAP01374 205 aa2.54□□□□□ -2
APAF1-208ENST00000549007 GZMBP10144 247 aa2.54□□□□□ -2
APAF1-208ENST00000549007 HTN3P15516 51 aa2.54□□□□□ -2
APAF1-208ENST00000549007 CRISP2P16562 243 aa2.54□□□□□ -2
APAF1-208ENST00000549007 RRN3P1Q2M238 152 aa2.54□□□□□ -2
APAF1-208ENST00000549007 ZNF493Q6ZR52 646 aa2.54□□□□□ -2
APAF1-208ENST00000549007 FMC1Q96HJ9 113 aa2.54□□□□□ -2
APAF1-208ENST00000549007 SEC11CQ9BY50 192 aa2.54□□□□□ -2
APAF1-208ENST00000549007 KLF12Q9Y4X4 402 aa2.54□□□□□ -2
APAF1-208ENST00000549007 SMIM26A0A096LP01 95 aa2.54□□□□□ -2
APAF1-208ENST00000549007 PDE6DO43924 150 aa2.54□□□□□ -2
APAF1-208ENST00000549007 IGLV2-8P01709 118 aa2.54□□□□□ -2
APAF1-208ENST00000549007 ORM1P02763 201 aa2.54□□□□□ -2
APAF1-208ENST00000549007 DEFB130BP0DP73 79 aa2.54□□□□□ -2
APAF1-208ENST00000549007 DEFB130AP0DP74 79 aa2.54□□□□□ -2
APAF1-208ENST00000549007 ADCYAP1P18509 176 aa2.54□□□□□ -2
APAF1-208ENST00000549007 GNG4P50150 75 aa2.54□□□□□ -2
APAF1-208ENST00000549007 DAZ2Q13117 558 aaKnown RBP2.54□□□□□ -2
APAF1-208ENST00000549007 SMIM7Q9BQ49 75 aa2.54□□□□□ -2
APAF1-208ENST00000549007 NOP10Q9NPE3 64 aaKnown RBP2.54□□□□□ -2
APAF1-208ENST00000549007 DAZ3Q9NR90 486 aaKnown RBP2.54□□□□□ -2
APAF1-208ENST00000549007 MRPL16Q9NX20 251 aaKnown RBP2.54□□□□□ -2
APAF1-208ENST00000549007 H7BYZ3 331 aa2.54□□□□□ -2
APAF1-208ENST00000549007 S100A12P80511 92 aa2.54□□□□□ -2
APAF1-208ENST00000549007 FAM222AQ5U5X8 452 aa2.54□□□□□ -2
APAF1-208ENST00000549007 ODF3Q96PU9 254 aa2.54□□□□□ -2
APAF1-208ENST00000549007 RNASE7Q9H1E1 156 aaKnown RBP2.54□□□□□ -2
APAF1-208ENST00000549007 TRAV21A0A0B4J279 112 aa2.53□□□□□ -2
APAF1-208ENST00000549007 IGKV3D-20A0A0C4DH25 116 aa2.53□□□□□ -2
APAF1-208ENST00000549007 PLAC8L1A1L4L8 177 aa2.53□□□□□ -2
APAF1-208ENST00000549007 ZNF727A8MUV8 499 aa2.53□□□□□ -2
APAF1-208ENST00000549007 KRTAP4-16G5E9R7 235 aaPredicted RBP2.53□□□□□ -2
APAF1-208ENST00000549007 IGHV3-53P01767 116 aa2.53□□□□□ -2
APAF1-208ENST00000549007 TYMSP04818 313 aa2.53□□□□□ -2
APAF1-208ENST00000549007 PFN1P07737 140 aaKnown RBP2.53□□□□□ -2
APAF1-208ENST00000549007 SFTA3P0C7M3 94 aa2.53□□□□□ -2
APAF1-208ENST00000549007 TAS2R60P59551 318 aa2.53□□□□□ -2
APAF1-208ENST00000549007 CEMP1Q6PRD7 247 aaPredicted RBP2.53□□□□□ -2
APAF1-208ENST00000549007 Q6ZTI0 123 aa2.53□□□□□ -2
APAF1-208ENST00000549007 STARD9Q9P2P6 4700 aa2.53□□□□□ -2
APAF1-208ENST00000549007 TRGV1A0A0A0MS02 117 aa2.53□□□□□ -2
APAF1-208ENST00000549007 B4DEV8 164 aa2.53□□□□□ -2
APAF1-208ENST00000549007 C9JCJ5 164 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms