RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 NSUN2Q08J23 767 aaKnown RBP eCLIP4.07□□□□□ -1.761e-91■■■■■ 317.4
APAF1-208ENST00000549007 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.43□□□□□ -1.545e-9■■■■■ 167.7
APAF1-208ENST00000549007 SF3B1O75533 1304 aaKnown RBP eCLIP3.8□□□□□ -1.82e-6■■■■■ 98
APAF1-208ENST00000549007 LSM11P83369 360 aaKnown RBP eCLIP5.78□□□□□ -1.481e-8■■■■■ 91.9
APAF1-208ENST00000549007 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.9□□□□□ -1.795e-15■■■■■ 55
APAF1-208ENST00000549007 SF3B4Q15427 424 aaKnown RBP eCLIP3.32□□□□□ -1.884e-12■■■■■ 53.5
APAF1-208ENST00000549007 PCBP2Q15366 365 aaKnown RBP eCLIP4.72□□□□□ -1.658e-10■■■■■ 41.4
APAF1-208ENST00000549007 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.41□□□□□ -1.062e-12■■■■■ 39
APAF1-208ENST00000549007 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.34□□□□□ -1.559e-6■■■■■ 27.7
APAF1-208ENST00000549007 ZRANB2O95218 330 aaKnown RBP eCLIP4.62□□□□□ -1.674e-6■■■■□ 26.2
APAF1-208ENST00000549007 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.27□□□□□ -1.732e-6■■■■□ 25.5
APAF1-208ENST00000549007 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.95□□□□□ -1.942e-6■■■■□ 24
APAF1-208ENST00000549007 QKIQ96PU8 341 aaKnown RBP eCLIP3.59□□□□□ -1.832e-6■■■■□ 23
APAF1-208ENST00000549007 TIA1P31483 386 aaKnown RBP eCLIP3.41□□□□□ -1.869e-6■■■■□ 19.7
APAF1-208ENST00000549007 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.92□□□□□ -1.627e-6■■■■□ 19.6
APAF1-208ENST00000549007 UPF1Q92900 1129 aaKnown RBP eCLIP6.73□□□□□ -1.333e-6■■■■□ 19.5
APAF1-208ENST00000549007 KHSRPQ92945 711 aaKnown RBP eCLIP6.39□□□□□ -1.399e-8■■■□□ 18.1
APAF1-208ENST00000549007 ZNF622Q969S3 477 aaKnown RBP eCLIP4.46□□□□□ -1.73e-6■■□□□ 13.5
APAF1-208ENST00000549007 PCBP1Q15365 356 aaKnown RBP eCLIP4.88□□□□□ -1.639e-6■■□□□ 13.3
APAF1-208ENST00000549007 U2AF2P26368 475 aaKnown RBP eCLIP4.01□□□□□ -1.778e-8■■□□□ 12.3
APAF1-208ENST00000549007 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.74□□□□□ -1.813e-6■□□□□ 10.3
Retrieved 21 of 21 RNA–protein pairs in 6.4 ms