RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 NBPF19A0A087WUL8 3843 aa10.17□□□□□ -0.78
PRPF40B-209ENST00000548825 LINC01549A6NIU2 74 aa10.17□□□□□ -0.78
PRPF40B-209ENST00000548825 LINC01587Q99440 93 aa10.17□□□□□ -0.78
PRPF40B-209ENST00000548825 SPXQ9BT56 116 aa10.17□□□□□ -0.78
PRPF40B-209ENST00000548825 TEX48A0A1B0GUV7 120 aa10.17□□□□□ -0.78
PRPF40B-209ENST00000548825 SYT8Q8NBV8 401 aa10.17□□□□□ -0.78
PRPF40B-209ENST00000548825 VCYO14598 125 aa10.16□□□□□ -0.78
PRPF40B-209ENST00000548825 PSMB2P49721 201 aa10.16□□□□□ -0.78
PRPF40B-209ENST00000548825 TRAV2A0A0B4J234 112 aa10.16□□□□□ -0.78
PRPF40B-209ENST00000548825 A0A0J9YX75 114 aa10.16□□□□□ -0.78
PRPF40B-209ENST00000548825 NEXN-AS1Q8NBZ9 246 aa10.16□□□□□ -0.78
PRPF40B-209ENST00000548825 RAX2Q96IS3 184 aa10.16□□□□□ -0.78
PRPF40B-209ENST00000548825 ZNF580Q9UK33 172 aa10.16□□□□□ -0.78
PRPF40B-209ENST00000548825 Q1RN00 199 aa10.15□□□□□ -0.78
PRPF40B-209ENST00000548825 C20orf78Q9BR46 151 aa10.15□□□□□ -0.78
PRPF40B-209ENST00000548825 SIVA1O15304 175 aa10.15□□□□□ -0.78
PRPF40B-209ENST00000548825 LGALS1P09382 135 aaKnown RBP10.15□□□□□ -0.78
PRPF40B-209ENST00000548825 TMEM61Q8N0U2 210 aa10.15□□□□□ -0.78
PRPF40B-209ENST00000548825 VPREB3Q9UKI3 123 aa10.15□□□□□ -0.78
PRPF40B-209ENST00000548825 ZNF469Q96JG9 3925 aaPredicted RBP10.15□□□□□ -0.78
PRPF40B-209ENST00000548825 IGLL5B9A064 214 aa10.15□□□□□ -0.79
PRPF40B-209ENST00000548825 LGALS3P17931 250 aaKnown RBP10.15□□□□□ -0.79
PRPF40B-209ENST00000548825 HERVK_113P61574 105 aa10.15□□□□□ -0.79
PRPF40B-209ENST00000548825 ZMAT4Q9H898 229 aa10.15□□□□□ -0.79
PRPF40B-209ENST00000548825 SETXQ7Z333 2677 aaKnown RBP10.15□□□□□ -0.79
PRPF40B-209ENST00000548825 A0A0J9YXV3 536 aa10.14□□□□□ -0.79
PRPF40B-209ENST00000548825 A0A1B0GWB2 263 aa10.14□□□□□ -0.79
PRPF40B-209ENST00000548825 KLLNB2CW77 178 aa10.13□□□□□ -0.79
PRPF40B-209ENST00000548825 GTSF1LQ9H1H1 148 aa10.13□□□□□ -0.79
PRPF40B-209ENST00000548825 FLNBO75369 2602 aaKnown RBP10.13□□□□□ -0.79
PRPF40B-209ENST00000548825 IGHV4-4A0A075B6R2 117 aa10.13□□□□□ -0.79
PRPF40B-209ENST00000548825 IGKV3OR2-268A0A0C4DH90 116 aa10.13□□□□□ -0.79
PRPF40B-209ENST00000548825 VCX2Q9H322 139 aa10.13□□□□□ -0.79
PRPF40B-209ENST00000548825 H3BUA1 57 aa10.13□□□□□ -0.79
PRPF40B-209ENST00000548825 PMVKQ15126 192 aa10.13□□□□□ -0.79
PRPF40B-209ENST00000548825 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.12□□□□□ -0.79
PRPF40B-209ENST00000548825 IGKV2-29A2NJV5 120 aaPredicted RBP10.12□□□□□ -0.79
PRPF40B-209ENST00000548825 A8MZ25 164 aa10.12□□□□□ -0.79
PRPF40B-209ENST00000548825 CD28P10747 220 aa10.12□□□□□ -0.79
PRPF40B-209ENST00000548825 CFHR3Q02985 330 aa10.12□□□□□ -0.79
PRPF40B-209ENST00000548825 TNFRSF18Q9Y5U5 241 aa10.12□□□□□ -0.79
PRPF40B-209ENST00000548825 TSHBP01222 138 aa10.12□□□□□ -0.79
PRPF40B-209ENST00000548825 K7EQG2 157 aa10.12□□□□□ -0.79
PRPF40B-209ENST00000548825 DLX4Q92988 240 aaPredicted RBP10.11□□□□□ -0.79
PRPF40B-209ENST00000548825 ZNF625Q96I27 306 aaPredicted RBP10.11□□□□□ -0.79
PRPF40B-209ENST00000548825 CRYGDP07320 174 aa10.11□□□□□ -0.79
PRPF40B-209ENST00000548825 RBMY1A1P0DJD3 496 aaKnown RBP10.11□□□□□ -0.79
PRPF40B-209ENST00000548825 RBMY1CP0DJD4 496 aa10.11□□□□□ -0.79
PRPF40B-209ENST00000548825 TSPEAR-AS2P59090 65 aa10.11□□□□□ -0.79
PRPF40B-209ENST00000548825 LINC00315P59091 139 aa10.11□□□□□ -0.79
PRPF40B-209ENST00000548825 RBMY1FQ15415 496 aaKnown RBP10.11□□□□□ -0.79
PRPF40B-209ENST00000548825 ZNRF2Q8NHG8 242 aa10.11□□□□□ -0.79
PRPF40B-209ENST00000548825 PTH2Q96A98 100 aa10.11□□□□□ -0.79
PRPF40B-209ENST00000548825 SMAGPQ0VAQ4 97 aa10.1□□□□□ -0.79
PRPF40B-209ENST00000548825 UFSP1Q6NVU6 142 aa10.1□□□□□ -0.79
PRPF40B-209ENST00000548825 SPAG8Q99932 426 aaPredicted RBP10.1□□□□□ -0.79
PRPF40B-209ENST00000548825 TRAV8-3A0A0A6YYJ7 113 aa10.1□□□□□ -0.79
PRPF40B-209ENST00000548825 PPP1R17O96001 155 aa10.1□□□□□ -0.79
PRPF40B-209ENST00000548825 DGAT2L7PQ6IED9 249 aa10.1□□□□□ -0.79
PRPF40B-209ENST00000548825 ATRQ13535 2644 aa10.1□□□□□ -0.79
PRPF40B-209ENST00000548825 INSL3P51460 131 aa10.1□□□□□ -0.79
PRPF40B-209ENST00000548825 CRIP2P52943 208 aaPredicted RBP10.1□□□□□ -0.79
PRPF40B-209ENST00000548825 OR5A1Q8NGJ0 315 aa10.1□□□□□ -0.79
PRPF40B-209ENST00000548825 UBR5O95071 2799 aaPredicted RBP10.09□□□□□ -0.79
PRPF40B-209ENST00000548825 IGHV4-31P0DP07 118 aa10.09□□□□□ -0.79
PRPF40B-209ENST00000548825 ZNF702PQ9H963 129 aa10.09□□□□□ -0.79
PRPF40B-209ENST00000548825 KIF25-AS1Q9Y6Z4 181 aa10.09□□□□□ -0.79
PRPF40B-209ENST00000548825 K7EMT4 169 aa10.09□□□□□ -0.79
PRPF40B-209ENST00000548825 M0QY20 66 aa10.09□□□□□ -0.79
PRPF40B-209ENST00000548825 GAGE13Q4V321 117 aa10.09□□□□□ -0.79
PRPF40B-209ENST00000548825 WFDC11Q8NEX6 87 aa10.09□□□□□ -0.79
PRPF40B-209ENST00000548825 HIGD1BQ9P298 99 aa10.09□□□□□ -0.79
PRPF40B-209ENST00000548825 E9PLD3 99 aa10.08□□□□□ -0.8
PRPF40B-209ENST00000548825 POLR2KP53803 58 aaKnown RBP10.08□□□□□ -0.8
PRPF40B-209ENST00000548825 J3QQQ9 107 aa10.08□□□□□ -0.8
PRPF40B-209ENST00000548825 DAND5Q8N907 189 aa10.08□□□□□ -0.8
PRPF40B-209ENST00000548825 TRGV1A0A0A0MS02 117 aa10.07□□□□□ -0.8
PRPF40B-209ENST00000548825 TRAV12-1A0A0B4J245 112 aa10.07□□□□□ -0.8
PRPF40B-209ENST00000548825 GATA3P23771 443 aa10.07□□□□□ -0.8
PRPF40B-209ENST00000548825 TM2D2Q9BX73 214 aa10.07□□□□□ -0.8
PRPF40B-209ENST00000548825 RRN3P1Q2M238 152 aa10.07□□□□□ -0.8
PRPF40B-209ENST00000548825 IGLV4-69A0A075B6H9 119 aa10.07□□□□□ -0.8
PRPF40B-209ENST00000548825 RPL35AP18077 110 aaKnown RBP10.07□□□□□ -0.8
PRPF40B-209ENST00000548825 MORN3Q6PF18 240 aaPredicted RBP10.07□□□□□ -0.8
PRPF40B-209ENST00000548825 FOXI2Q6ZQN5 318 aa10.07□□□□□ -0.8
PRPF40B-209ENST00000548825 TRPT1Q86TN4 253 aaKnown RBP10.07□□□□□ -0.8
PRPF40B-209ENST00000548825 FAM19A4Q96LR4 140 aa10.07□□□□□ -0.8
PRPF40B-209ENST00000548825 TSSC4Q9Y5U2 329 aaPredicted RBP10.07□□□□□ -0.8
PRPF40B-209ENST00000548825 DSCR9P59020 149 aa10.06□□□□□ -0.8
PRPF40B-209ENST00000548825 WFDC10AQ9H1F0 79 aa10.06□□□□□ -0.8
PRPF40B-209ENST00000548825 IGIPA6NJ69 53 aa10.06□□□□□ -0.8
PRPF40B-209ENST00000548825 Q6ZSN1 163 aa10.06□□□□□ -0.8
PRPF40B-209ENST00000548825 A6NJY4 79 aa10.05□□□□□ -0.8
PRPF40B-209ENST00000548825 LINC01619G3V211 115 aa10.05□□□□□ -0.8
PRPF40B-209ENST00000548825 SPINK8P0C7L1 97 aa10.05□□□□□ -0.8
PRPF40B-209ENST00000548825 ATP6V0BQ99437 205 aa10.05□□□□□ -0.8
PRPF40B-209ENST00000548825 TRGV11A0A075B6L2 103 aa10.05□□□□□ -0.8
PRPF40B-209ENST00000548825 TRBV7-3A0A075B6L6 115 aa10.05□□□□□ -0.8
PRPF40B-209ENST00000548825 LINC01546A6NGU7 62 aa10.05□□□□□ -0.8
PRPF40B-209ENST00000548825 I3L3M4 83 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms