RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 SRIP30626 198 aa11.08□□□□□ -0.64
SSH1-208ENST00000548522 TMEM78Q5T7P6 136 aa11.08□□□□□ -0.64
SSH1-208ENST00000548522 Q6AWC8 147 aa11.08□□□□□ -0.64
SSH1-208ENST00000548522 DAZAP1Q96EP5 407 aaKnown RBP11.08□□□□□ -0.64
SSH1-208ENST00000548522 TRAV9-2A0A087WT02 112 aa11.07□□□□□ -0.64
SSH1-208ENST00000548522 TRGV4A0A0C4DH28 118 aa11.07□□□□□ -0.64
SSH1-208ENST00000548522 S100A2P29034 98 aa11.07□□□□□ -0.64
SSH1-208ENST00000548522 ZNF415Q09FC8 603 aa11.07□□□□□ -0.64
SSH1-208ENST00000548522 SLAQ13239 276 aa11.07□□□□□ -0.64
SSH1-208ENST00000548522 Q6ZSN1 163 aa11.07□□□□□ -0.64
SSH1-208ENST00000548522 HMCN2Q8NDA2 5059 aa11.07□□□□□ -0.64
SSH1-208ENST00000548522 LOC100131303A0A0U1RQF7 123 aa11.06□□□□□ -0.64
SSH1-208ENST00000548522 XKRY2A2RUG3 117 aa11.06□□□□□ -0.64
SSH1-208ENST00000548522 CRYGDP07320 174 aa11.06□□□□□ -0.64
SSH1-208ENST00000548522 EVI2AP22794 236 aa11.06□□□□□ -0.64
SSH1-208ENST00000548522 Q0VG73 95 aa11.06□□□□□ -0.64
SSH1-208ENST00000548522 TMEM136Q6ZRR5 245 aa11.06□□□□□ -0.64
SSH1-208ENST00000548522 NHLRC2Q8NBF2 726 aa11.06□□□□□ -0.64
SSH1-208ENST00000548522 PACRGQ96M98 296 aaPredicted RBP11.06□□□□□ -0.64
SSH1-208ENST00000548522 MRPL18Q9H0U6 180 aaKnown RBP11.06□□□□□ -0.64
SSH1-208ENST00000548522 RPH3ALQ9UNE2 315 aa11.06□□□□□ -0.64
SSH1-208ENST00000548522 IGLV5-52A0A0A0MRZ9 124 aa11.05□□□□□ -0.64
SSH1-208ENST00000548522 A0A1B0GW15 77 aa11.05□□□□□ -0.64
SSH1-208ENST00000548522 A0A1B0GXF2 115 aa11.05□□□□□ -0.64
SSH1-208ENST00000548522 LRCOL1A6NCL2 159 aa11.05□□□□□ -0.64
SSH1-208ENST00000548522 ESDP10768 282 aa11.05□□□□□ -0.64
SSH1-208ENST00000548522 ZNF138P52744 262 aa11.05□□□□□ -0.64
SSH1-208ENST00000548522 PRNTQ86SH4 94 aa11.05□□□□□ -0.64
SSH1-208ENST00000548522 NUP35Q8NFH5 326 aa11.05□□□□□ -0.64
SSH1-208ENST00000548522 IFITM10A6NMD0 228 aa11.04□□□□□ -0.64
SSH1-208ENST00000548522 FAM229AH3BQW9 127 aa11.04□□□□□ -0.64
SSH1-208ENST00000548522 PRR27Q6MZM9 219 aa11.04□□□□□ -0.64
SSH1-208ENST00000548522 GATD1Q8NB37 220 aa11.04□□□□□ -0.64
SSH1-208ENST00000548522 FAM30AQ9NZY2 134 aa11.04□□□□□ -0.64
SSH1-208ENST00000548522 LENEPQ9Y5L5 61 aa11.04□□□□□ -0.64
SSH1-208ENST00000548522 LRP1Q07954 4544 aaKnown RBP11.04□□□□□ -0.64
SSH1-208ENST00000548522 TRAV8-1A0A0A6YYK1 113 aa11.03□□□□□ -0.64
SSH1-208ENST00000548522 HIGD1CA8MV81 97 aa11.03□□□□□ -0.64
SSH1-208ENST00000548522 RPS20P60866 119 aaKnown RBP11.03□□□□□ -0.64
SSH1-208ENST00000548522 OR10J3Q5JRS4 329 aa11.03□□□□□ -0.64
SSH1-208ENST00000548522 DMRTA1Q5VZB9 504 aa11.03□□□□□ -0.64
SSH1-208ENST00000548522 C12orf57Q99622 126 aa11.03□□□□□ -0.64
SSH1-208ENST00000548522 NDFIP1Q9BT67 221 aa11.03□□□□□ -0.64
SSH1-208ENST00000548522 HBBP68871 147 aa11.02□□□□□ -0.65
SSH1-208ENST00000548522 S100A12P80511 92 aa11.02□□□□□ -0.65
SSH1-208ENST00000548522 RASL10AQ92737 203 aa11.02□□□□□ -0.65
SSH1-208ENST00000548522 ZC2HC1AQ96GY0 325 aa11.02□□□□□ -0.65
SSH1-208ENST00000548522 TMEM70Q9BUB7 260 aa11.02□□□□□ -0.65
SSH1-208ENST00000548522 K7EP13 123 aa11.01□□□□□ -0.65
SSH1-208ENST00000548522 FAM162BQ5T6X4 162 aa11.01□□□□□ -0.65
SSH1-208ENST00000548522 TMEM18Q96B42 140 aa11.01□□□□□ -0.65
SSH1-208ENST00000548522 HIST1H2BLQ99880 126 aa11.01□□□□□ -0.65
SSH1-208ENST00000548522 IGHV3-16A0A0C4DH30 117 aa11□□□□□ -0.65
SSH1-208ENST00000548522 TRBV7-9A0A0J9YWB2 115 aa11□□□□□ -0.65
SSH1-208ENST00000548522 J3QL48 77 aa11□□□□□ -0.65
SSH1-208ENST00000548522 PSCAO43653 123 aa11□□□□□ -0.65
SSH1-208ENST00000548522 ORM1P02763 201 aa11□□□□□ -0.65
SSH1-208ENST00000548522 C10orf126Q8N4M7 172 aa11□□□□□ -0.65
SSH1-208ENST00000548522 Q8N814 137 aa11□□□□□ -0.65
SSH1-208ENST00000548522 OR2D3Q8NGH3 330 aa11□□□□□ -0.65
SSH1-208ENST00000548522 SGK494Q96LW2 274 aa11□□□□□ -0.65
SSH1-208ENST00000548522 Q9HAA7 133 aa11□□□□□ -0.65
SSH1-208ENST00000548522 NAGKQ9UJ70 344 aa11□□□□□ -0.65
SSH1-208ENST00000548522 UBR4Q5T4S7 5183 aa11□□□□□ -0.65
SSH1-208ENST00000548522 APCSP02743 223 aa10.99□□□□□ -0.65
SSH1-208ENST00000548522 MRPL54Q6P161 138 aaKnown RBP10.99□□□□□ -0.65
SSH1-208ENST00000548522 NTN5Q8WTR8 489 aaPredicted RBP10.99□□□□□ -0.65
SSH1-208ENST00000548522 GTSF1Q8WW33 167 aa10.99□□□□□ -0.65
SSH1-208ENST00000548522 TRAV4A0A0B4J268 109 aa10.98□□□□□ -0.65
SSH1-208ENST00000548522 IGHV3-38A0A0C4DH36 116 aa10.98□□□□□ -0.65
SSH1-208ENST00000548522 RIGQ13278 110 aa10.98□□□□□ -0.65
SSH1-208ENST00000548522 WFDC2Q14508 124 aa10.98□□□□□ -0.65
SSH1-208ENST00000548522 FAT3Q8TDW7 4589 aa10.98□□□□□ -0.65
SSH1-208ENST00000548522 TRGV11A0A075B6L2 103 aa10.97□□□□□ -0.65
SSH1-208ENST00000548522 GNRH2O43555 120 aa10.97□□□□□ -0.65
SSH1-208ENST00000548522 CRIP1P50238 77 aa10.97□□□□□ -0.65
SSH1-208ENST00000548522 LINC01556Q5JQF7 62 aa10.97□□□□□ -0.65
SSH1-208ENST00000548522 FAM159AQ6UWV7 190 aa10.97□□□□□ -0.65
SSH1-208ENST00000548522 OR4C5Q8NGB2 326 aa10.97□□□□□ -0.65
SSH1-208ENST00000548522 OR10D4PQ8NGN7 298 aa10.97□□□□□ -0.65
SSH1-208ENST00000548522 SPXQ9BT56 116 aa10.97□□□□□ -0.65
SSH1-208ENST00000548522 A0A1B0GUT8 65 aa10.96□□□□□ -0.65
SSH1-208ENST00000548522 IBA57-AS1B1ANH7 110 aa10.96□□□□□ -0.65
SSH1-208ENST00000548522 SH2D1AO60880 128 aa10.96□□□□□ -0.65
SSH1-208ENST00000548522 FABP4P15090 132 aa10.96□□□□□ -0.65
SSH1-208ENST00000548522 Q8N3U1 123 aa10.96□□□□□ -0.65
SSH1-208ENST00000548522 FABP5P3A8MUU1 101 aa10.95□□□□□ -0.66
SSH1-208ENST00000548522 IGHV3-30P01768 117 aa10.95□□□□□ -0.66
SSH1-208ENST00000548522 IGHV3-33P01772 117 aa10.95□□□□□ -0.66
SSH1-208ENST00000548522 IGHV3-30-3P0DP02 117 aa10.95□□□□□ -0.66
SSH1-208ENST00000548522 IGHV3-30-5P0DP03 117 aa10.95□□□□□ -0.66
SSH1-208ENST00000548522 GATA1P15976 413 aaPredicted RBP10.95□□□□□ -0.66
SSH1-208ENST00000548522 JOSD1Q15040 202 aaPredicted RBP10.95□□□□□ -0.66
SSH1-208ENST00000548522 LINC01559Q495D7 138 aa10.95□□□□□ -0.66
SSH1-208ENST00000548522 PYY3Q5JQD4 70 aa10.95□□□□□ -0.66
SSH1-208ENST00000548522 BORCS7Q96B45 105 aa10.95□□□□□ -0.66
SSH1-208ENST00000548522 CNFNQ9BYD5 112 aa10.95□□□□□ -0.66
SSH1-208ENST00000548522 M0R2P5 195 aa10.94□□□□□ -0.66
SSH1-208ENST00000548522 CTRLP40313 264 aa10.94□□□□□ -0.66
SSH1-208ENST00000548522 TIRAPP58753 221 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms