RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 KMT2CQ8NEZ4 4911 aaKnown RBP12.59□□□□□ -0.39
RBFOX1-207ENST00000547338 TRAV12-1A0A0B4J245 112 aa12.58□□□□□ -0.4
RBFOX1-207ENST00000547338 TCAPO15273 167 aa12.58□□□□□ -0.4
RBFOX1-207ENST00000547338 LINC00315P59091 139 aa12.58□□□□□ -0.4
RBFOX1-207ENST00000547338 SPAG8Q99932 426 aaPredicted RBP12.58□□□□□ -0.4
RBFOX1-207ENST00000547338 LINC00467Q9BRT7 94 aa12.58□□□□□ -0.4
RBFOX1-207ENST00000547338 TRAV26-2A0A0B4J265 109 aa12.57□□□□□ -0.4
RBFOX1-207ENST00000547338 TRBV6-5A0A0K0K1A5 114 aa12.57□□□□□ -0.4
RBFOX1-207ENST00000547338 RBMY1BA6NDE4 496 aaKnown RBP12.57□□□□□ -0.4
RBFOX1-207ENST00000547338 RBMY1EA6NEQ0 496 aaKnown RBP12.57□□□□□ -0.4
RBFOX1-207ENST00000547338 NUDT3O95989 172 aa12.57□□□□□ -0.4
RBFOX1-207ENST00000547338 RBMY1DP0C7P1 496 aaKnown RBP12.57□□□□□ -0.4
RBFOX1-207ENST00000547338 ODF1Q14990 250 aa12.57□□□□□ -0.4
RBFOX1-207ENST00000547338 TOMM6Q96B49 74 aa12.57□□□□□ -0.4
RBFOX1-207ENST00000547338 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.57□□□□□ -0.4
RBFOX1-207ENST00000547338 H3BMM0 161 aa12.56□□□□□ -0.4
RBFOX1-207ENST00000547338 VCYO14598 125 aa12.56□□□□□ -0.4
RBFOX1-207ENST00000547338 DPM2O94777 84 aa12.56□□□□□ -0.4
RBFOX1-207ENST00000547338 MGPP08493 103 aa12.56□□□□□ -0.4
RBFOX1-207ENST00000547338 GAGE1Q13065 139 aa12.56□□□□□ -0.4
RBFOX1-207ENST00000547338 OR11H12B2RN74 326 aa12.55□□□□□ -0.4
RBFOX1-207ENST00000547338 IGKCP01834 107 aa12.55□□□□□ -0.4
RBFOX1-207ENST00000547338 FXYD7P58549 80 aa12.55□□□□□ -0.4
RBFOX1-207ENST00000547338 DEFB131AP59861 70 aa12.55□□□□□ -0.4
RBFOX1-207ENST00000547338 BATFQ16520 125 aa12.55□□□□□ -0.4
RBFOX1-207ENST00000547338 BOD1L2Q8IYS8 172 aa12.55□□□□□ -0.4
RBFOX1-207ENST00000547338 EDA2RQ9HAV5 297 aa12.55□□□□□ -0.4
RBFOX1-207ENST00000547338 A0A087WX48 190 aa12.54□□□□□ -0.4
RBFOX1-207ENST00000547338 PLNP26678 52 aa12.54□□□□□ -0.4
RBFOX1-207ENST00000547338 POLR2KP53803 58 aaKnown RBP12.54□□□□□ -0.4
RBFOX1-207ENST00000547338 SPINK13Q1W4C9 94 aa12.54□□□□□ -0.4
RBFOX1-207ENST00000547338 C18orf15Q96N68 181 aa12.54□□□□□ -0.4
RBFOX1-207ENST00000547338 H7C1H1 209 aa12.52□□□□□ -0.4
RBFOX1-207ENST00000547338 STPG4Q8N801 248 aa12.52□□□□□ -0.4
RBFOX1-207ENST00000547338 KIR2DL4Q99706 377 aa12.52□□□□□ -0.4
RBFOX1-207ENST00000547338 RETNQ9HD89 108 aa12.52□□□□□ -0.4
RBFOX1-207ENST00000547338 IGKV3-20P01619 116 aa12.52□□□□□ -0.41
RBFOX1-207ENST00000547338 HINT1P49773 126 aaPredicted RBP12.52□□□□□ -0.41
RBFOX1-207ENST00000547338 ODF3L2Q3SX64 289 aa12.52□□□□□ -0.41
RBFOX1-207ENST00000547338 ANKRD39Q53RE8 183 aa12.52□□□□□ -0.41
RBFOX1-207ENST00000547338 ERASQ7Z444 233 aa12.52□□□□□ -0.41
RBFOX1-207ENST00000547338 SCGB3A1Q96QR1 104 aa12.52□□□□□ -0.41
RBFOX1-207ENST00000547338 CSTL1Q9H114 145 aa12.52□□□□□ -0.41
RBFOX1-207ENST00000547338 DKK2Q9UBU2 259 aa12.52□□□□□ -0.41
RBFOX1-207ENST00000547338 HHLA3Q9XRX5 114 aa12.52□□□□□ -0.41
RBFOX1-207ENST00000547338 CSMD3Q7Z407 3707 aa12.51□□□□□ -0.41
RBFOX1-207ENST00000547338 TRAV12-2A0A075B6T6 113 aa12.51□□□□□ -0.41
RBFOX1-207ENST00000547338 TRBV27A0A0K0K1C4 114 aa12.51□□□□□ -0.41
RBFOX1-207ENST00000547338 FGF6P10767 208 aa12.51□□□□□ -0.41
RBFOX1-207ENST00000547338 SUMO4Q6EEV6 95 aa12.51□□□□□ -0.41
RBFOX1-207ENST00000547338 TRPT1Q86TN4 253 aaKnown RBP12.51□□□□□ -0.41
RBFOX1-207ENST00000547338 ORAOV1Q8WV07 137 aa12.51□□□□□ -0.41
RBFOX1-207ENST00000547338 RPL39LQ96EH5 51 aaKnown RBP12.51□□□□□ -0.41
RBFOX1-207ENST00000547338 MDFICQ9P1T7 246 aa12.51□□□□□ -0.41
RBFOX1-207ENST00000547338 TMEM141Q96I45 108 aa12.5□□□□□ -0.41
RBFOX1-207ENST00000547338 SPATA25Q9BR10 227 aa12.5□□□□□ -0.41
RBFOX1-207ENST00000547338 MAP6D1Q9H9H5 199 aa12.5□□□□□ -0.41
RBFOX1-207ENST00000547338 CYSLTR1Q9Y271 337 aa12.5□□□□□ -0.41
RBFOX1-207ENST00000547338 CBY3A6NI87 242 aa12.49□□□□□ -0.41
RBFOX1-207ENST00000547338 F5H697 171 aa12.49□□□□□ -0.41
RBFOX1-207ENST00000547338 F8VRH5 84 aa12.49□□□□□ -0.41
RBFOX1-207ENST00000547338 CRYGDP07320 174 aa12.49□□□□□ -0.41
RBFOX1-207ENST00000547338 SEC11AP67812 179 aa12.49□□□□□ -0.41
RBFOX1-207ENST00000547338 PAPPA-AS1Q5QFB9 102 aa12.49□□□□□ -0.41
RBFOX1-207ENST00000547338 BVES-AS1Q5T3Y7 98 aa12.49□□□□□ -0.41
RBFOX1-207ENST00000547338 C2orf66Q6UXQ4 117 aa12.49□□□□□ -0.41
RBFOX1-207ENST00000547338 SPXQ9BT56 116 aa12.49□□□□□ -0.41
RBFOX1-207ENST00000547338 HIGD1BQ9P298 99 aa12.49□□□□□ -0.41
RBFOX1-207ENST00000547338 KNCNA6PVL3 124 aa12.48□□□□□ -0.41
RBFOX1-207ENST00000547338 A8MWV9 139 aa12.48□□□□□ -0.41
RBFOX1-207ENST00000547338 ZNF25P17030 456 aaPredicted RBP12.48□□□□□ -0.41
RBFOX1-207ENST00000547338 RHOHQ15669 191 aa12.48□□□□□ -0.41
RBFOX1-207ENST00000547338 MPV17L2Q567V2 206 aa12.48□□□□□ -0.41
RBFOX1-207ENST00000547338 FAM110AQ9BQ89 295 aa12.48□□□□□ -0.41
RBFOX1-207ENST00000547338 M0QY20 66 aa12.47□□□□□ -0.41
RBFOX1-207ENST00000547338 ZNF415Q09FC8 603 aa12.47□□□□□ -0.41
RBFOX1-207ENST00000547338 ZNF876PQ49A33 203 aa12.47□□□□□ -0.41
RBFOX1-207ENST00000547338 NEXN-AS1Q8NBZ9 246 aa12.47□□□□□ -0.41
RBFOX1-207ENST00000547338 DYNC2H1Q8NCM8 4307 aaKnown RBP12.47□□□□□ -0.41
RBFOX1-207ENST00000547338 TMEM97Q5BJF2 176 aa12.47□□□□□ -0.41
RBFOX1-207ENST00000547338 C2orf91Q6ZV80 131 aa12.47□□□□□ -0.41
RBFOX1-207ENST00000547338 TIMM17AQ99595 171 aa12.47□□□□□ -0.41
RBFOX1-207ENST00000547338 SDHAF1A6NFY7 115 aa12.46□□□□□ -0.42
RBFOX1-207ENST00000547338 M0R2P5 195 aa12.46□□□□□ -0.42
RBFOX1-207ENST00000547338 SPRY2O43597 315 aa12.46□□□□□ -0.42
RBFOX1-207ENST00000547338 INSP01308 110 aa12.46□□□□□ -0.42
RBFOX1-207ENST00000547338 HSD52Q0P140 79 aa12.46□□□□□ -0.42
RBFOX1-207ENST00000547338 ZNF124Q15973 351 aa12.46□□□□□ -0.42
RBFOX1-207ENST00000547338 ZFP2Q6ZN57 461 aa12.46□□□□□ -0.42
RBFOX1-207ENST00000547338 TMEM208Q9BTX3 173 aa12.46□□□□□ -0.42
RBFOX1-207ENST00000547338 MRPL35Q9NZE8 188 aaKnown RBP12.46□□□□□ -0.42
RBFOX1-207ENST00000547338 CHTOPQ9Y3Y2 248 aaKnown RBP12.46□□□□□ -0.42
RBFOX1-207ENST00000547338 TENM2Q9NT68 2774 aa12.45□□□□□ -0.42
RBFOX1-207ENST00000547338 A0A087WWL8 130 aa12.45□□□□□ -0.42
RBFOX1-207ENST00000547338 MUC7Q8TAX7 377 aa12.45□□□□□ -0.42
RBFOX1-207ENST00000547338 COX11Q9Y6N1 276 aa12.45□□□□□ -0.42
RBFOX1-207ENST00000547338 STARD9Q9P2P6 4700 aa12.45□□□□□ -0.42
RBFOX1-207ENST00000547338 RYR3Q15413 4870 aa12.45□□□□□ -0.42
RBFOX1-207ENST00000547338 RHODO00212 210 aa12.44□□□□□ -0.42
RBFOX1-207ENST00000547338 ZNF56Q15929 161 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms