RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 CCL18P55774 89 aa9.47□□□□□ -0.89
COL4A6-209ENST00000545689 RNASE8Q8TDE3 154 aaKnown RBP9.46□□□□□ -0.89
COL4A6-209ENST00000545689 DYSFO75923 2080 aa9.46□□□□□ -0.89
COL4A6-209ENST00000545689 SPTBN1Q01082 2364 aaKnown RBP9.46□□□□□ -0.89
COL4A6-209ENST00000545689 SPANXB1Q9NS25 103 aaPredicted RBP9.46□□□□□ -0.89
COL4A6-209ENST00000545689 PRO0255Q9UI72 69 aa9.46□□□□□ -0.89
COL4A6-209ENST00000545689 UBE2BP63146 152 aa9.46□□□□□ -0.9
COL4A6-209ENST00000545689 NFE4Q86UQ8 179 aa9.46□□□□□ -0.9
COL4A6-209ENST00000545689 TM2D2Q9BX73 214 aa9.46□□□□□ -0.9
COL4A6-209ENST00000545689 RPL18AQ02543 176 aaKnown RBP9.45□□□□□ -0.9
COL4A6-209ENST00000545689 PDE6GP18545 87 aa9.45□□□□□ -0.9
COL4A6-209ENST00000545689 DEFB1P60022 68 aa9.45□□□□□ -0.9
COL4A6-209ENST00000545689 SMIM20Q8N5G0 67 aa9.45□□□□□ -0.9
COL4A6-209ENST00000545689 COL6A6A6NMZ7 2263 aa9.45□□□□□ -0.9
COL4A6-209ENST00000545689 MED13Q9UHV7 2174 aa9.45□□□□□ -0.9
COL4A6-209ENST00000545689 AKAP6Q13023 2319 aa9.45□□□□□ -0.9
COL4A6-209ENST00000545689 DNAJC9-AS1A6NH13 148 aa9.45□□□□□ -0.9
COL4A6-209ENST00000545689 Q8N6K4 173 aa9.44□□□□□ -0.9
COL4A6-209ENST00000545689 SMIM9A6NGZ8 99 aa9.44□□□□□ -0.9
COL4A6-209ENST00000545689 TMEM258P61165 79 aa9.44□□□□□ -0.9
COL4A6-209ENST00000545689 NRGNQ92686 78 aa9.44□□□□□ -0.9
COL4A6-209ENST00000545689 CITED2Q99967 270 aaPredicted RBP9.44□□□□□ -0.9
COL4A6-209ENST00000545689 A0A0J9YXY3 114 aa9.44□□□□□ -0.9
COL4A6-209ENST00000545689 LINC01548A6NM66 108 aa9.44□□□□□ -0.9
COL4A6-209ENST00000545689 Q6ZUT4 128 aa9.44□□□□□ -0.9
COL4A6-209ENST00000545689 hADV29S1A0JD25 119 aa9.44□□□□□ -0.9
COL4A6-209ENST00000545689 IGLV2-11P01706 119 aa9.43□□□□□ -0.9
COL4A6-209ENST00000545689 IGHV3-30P01768 117 aa9.43□□□□□ -0.9
COL4A6-209ENST00000545689 IGHV3-33P01772 117 aa9.43□□□□□ -0.9
COL4A6-209ENST00000545689 IGHV3-30-5P0DP03 117 aa9.43□□□□□ -0.9
COL4A6-209ENST00000545689 C22orf34Q6ZV56 151 aa9.43□□□□□ -0.9
COL4A6-209ENST00000545689 C20orf173Q96LM9 149 aa9.43□□□□□ -0.9
COL4A6-209ENST00000545689 TP53TG3Q9ULZ0 132 aa9.43□□□□□ -0.9
COL4A6-209ENST00000545689 SMAD5-AS1Q9Y6J3 95 aa9.43□□□□□ -0.9
COL4A6-209ENST00000545689 IGLV10-54A0A075B6I4 117 aa9.43□□□□□ -0.9
COL4A6-209ENST00000545689 TMEM256-PLSCR3K7ERE1 68 aa9.43□□□□□ -0.9
COL4A6-209ENST00000545689 SPAG11BQ08648 103 aa9.43□□□□□ -0.9
COL4A6-209ENST00000545689 MIR7-3HGQ8N6C7 128 aa9.43□□□□□ -0.9
COL4A6-209ENST00000545689 DAND5Q8N907 189 aa9.43□□□□□ -0.9
COL4A6-209ENST00000545689 CRIP1P50238 77 aa9.43□□□□□ -0.9
COL4A6-209ENST00000545689 TIRAPP58753 221 aa9.43□□□□□ -0.9
COL4A6-209ENST00000545689 DIRC1Q969H9 104 aa9.43□□□□□ -0.9
COL4A6-209ENST00000545689 RNF185Q96GF1 192 aa9.43□□□□□ -0.9
COL4A6-209ENST00000545689 CADP27708 2225 aa9.42□□□□□ -0.9
COL4A6-209ENST00000545689 TMEM223A0PJW6 202 aa9.42□□□□□ -0.9
COL4A6-209ENST00000545689 PRB1P04280 392 aa9.42□□□□□ -0.9
COL4A6-209ENST00000545689 Q9HAA7 133 aa9.42□□□□□ -0.9
COL4A6-209ENST00000545689 DOCK10Q96BY6 2186 aa9.42□□□□□ -0.9
COL4A6-209ENST00000545689 IGHV4-31P0DP07 118 aa9.42□□□□□ -0.9
COL4A6-209ENST00000545689 LECT2O14960 151 aa9.42□□□□□ -0.9
COL4A6-209ENST00000545689 PCNX2A6NKB5 2137 aa9.42□□□□□ -0.9
COL4A6-209ENST00000545689 TRBV6-5A0A0K0K1A5 114 aa9.41□□□□□ -0.9
COL4A6-209ENST00000545689 ZFAND2AQ8N6M9 145 aa9.41□□□□□ -0.9
COL4A6-209ENST00000545689 CLEC2BQ92478 149 aa9.41□□□□□ -0.9
COL4A6-209ENST00000545689 LYRM9A8MSI8 78 aa9.41□□□□□ -0.9
COL4A6-209ENST00000545689 POLEQ07864 2286 aa9.41□□□□□ -0.9
COL4A6-209ENST00000545689 NCOA6Q14686 2063 aaPredicted RBP9.41□□□□□ -0.9
COL4A6-209ENST00000545689 DEFB105AQ8NG35 78 aa9.41□□□□□ -0.9
COL4A6-209ENST00000545689 NCR3O14931 201 aa9.4□□□□□ -0.9
COL4A6-209ENST00000545689 DEFB114Q30KQ6 69 aa9.4□□□□□ -0.9
COL4A6-209ENST00000545689 RIF1Q5UIP0 2472 aaKnown RBP9.4□□□□□ -0.9
COL4A6-209ENST00000545689 TCL1BO95988 128 aa9.4□□□□□ -0.9
COL4A6-209ENST00000545689 PLA2G5P39877 138 aa9.4□□□□□ -0.9
COL4A6-209ENST00000545689 C19orf84I3L1E1 186 aa9.4□□□□□ -0.9
COL4A6-209ENST00000545689 HIST2H2BDQ6DRA6 164 aa9.4□□□□□ -0.9
COL4A6-209ENST00000545689 PYGO1Q9Y3Y4 419 aa9.4□□□□□ -0.9
COL4A6-209ENST00000545689 B5MCH6 92 aa9.4□□□□□ -0.91
COL4A6-209ENST00000545689 PSMB8P28062 276 aa9.39□□□□□ -0.91
COL4A6-209ENST00000545689 WNK2Q9Y3S1 2297 aa9.39□□□□□ -0.91
COL4A6-209ENST00000545689 DEFB135Q30KP9 77 aa9.39□□□□□ -0.91
COL4A6-209ENST00000545689 ZNF22P17026 224 aaPredicted RBP9.39□□□□□ -0.91
COL4A6-209ENST00000545689 ZGRF1Q86YA3 2104 aa9.39□□□□□ -0.91
COL4A6-209ENST00000545689 IGLV4-3A0A075B6K6 122 aa9.39□□□□□ -0.91
COL4A6-209ENST00000545689 FAM236AA0A1B0GUQ0 79 aa9.39□□□□□ -0.91
COL4A6-209ENST00000545689 FAM236BA0A1B0GV22 79 aa9.39□□□□□ -0.91
COL4A6-209ENST00000545689 M0QY20 66 aa9.39□□□□□ -0.91
COL4A6-209ENST00000545689 RBM3P98179 157 aaKnown RBP9.39□□□□□ -0.91
COL4A6-209ENST00000545689 LINC00643Q86TS7 51 aa9.39□□□□□ -0.91
COL4A6-209ENST00000545689 IGHV4-4A0A075B6R2 117 aa9.38□□□□□ -0.91
COL4A6-209ENST00000545689 RS1O15537 224 aa9.38□□□□□ -0.91
COL4A6-209ENST00000545689 NREPQ16612 68 aa9.38□□□□□ -0.91
COL4A6-209ENST00000545689 F8W735 103 aaPredicted RBP9.38□□□□□ -0.91
COL4A6-209ENST00000545689 TECTAO75443 2155 aa9.38□□□□□ -0.91
COL4A6-209ENST00000545689 UFSP1Q6NVU6 142 aa9.38□□□□□ -0.91
COL4A6-209ENST00000545689 TRBV27A0A0K0K1C4 114 aa9.38□□□□□ -0.91
COL4A6-209ENST00000545689 P0DMU3 169 aa9.38□□□□□ -0.91
COL4A6-209ENST00000545689 FAM231AP0DMU4 169 aa9.38□□□□□ -0.91
COL4A6-209ENST00000545689 FAM231CP0DMU5 169 aa9.38□□□□□ -0.91
COL4A6-209ENST00000545689 A0A1B0GX51 115 aa9.38□□□□□ -0.91
COL4A6-209ENST00000545689 SPTBN2O15020 2390 aa9.37□□□□□ -0.91
COL4A6-209ENST00000545689 LINC00467Q9BRT7 94 aa9.37□□□□□ -0.91
COL4A6-209ENST00000545689 ARFGEF3Q5TH69 2177 aa9.37□□□□□ -0.91
COL4A6-209ENST00000545689 TIMM17BO60830 172 aa9.37□□□□□ -0.91
COL4A6-209ENST00000545689 CEMP1Q6PRD7 247 aaPredicted RBP9.37□□□□□ -0.91
COL4A6-209ENST00000545689 Q6ZTI0 123 aa9.37□□□□□ -0.91
COL4A6-209ENST00000545689 CFAP126Q5VTH2 177 aa9.36□□□□□ -0.91
COL4A6-209ENST00000545689 PSMG3-AS1Q96PY0 264 aa9.36□□□□□ -0.91
COL4A6-209ENST00000545689 LRP4O75096 1905 aa9.36□□□□□ -0.91
COL4A6-209ENST00000545689 IGKV3D-7A0A0C4DH55 119 aa9.36□□□□□ -0.91
COL4A6-209ENST00000545689 COX7BP24311 80 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms