RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 FSHBP01225 129 aa17.27■□□□□ 0.36
FOXA1-202ENST00000545425 ZNF688P0C7X2 276 aa17.27■□□□□ 0.36
FOXA1-202ENST00000545425 C11orf86A6NJI1 115 aa17.26■□□□□ 0.35
FOXA1-202ENST00000545425 NAA38Q9BRA0 125 aaKnown RBP17.26■□□□□ 0.35
FOXA1-202ENST00000545425 FN1P02751 2386 aaKnown RBP17.26■□□□□ 0.35
FOXA1-202ENST00000545425 SPRY2O43597 315 aa17.26■□□□□ 0.35
FOXA1-202ENST00000545425 RRN3P1Q2M238 152 aa17.26■□□□□ 0.35
FOXA1-202ENST00000545425 ZNF815PA8K554 130 aa17.25■□□□□ 0.35
FOXA1-202ENST00000545425 INAFM1C9JVW0 142 aa17.25■□□□□ 0.35
FOXA1-202ENST00000545425 CRYGDP07320 174 aa17.25■□□□□ 0.35
FOXA1-202ENST00000545425 TMEM95Q3KNT9 176 aa17.25■□□□□ 0.35
FOXA1-202ENST00000545425 PIK3CD-AS1Q5SR53 167 aa17.25■□□□□ 0.35
FOXA1-202ENST00000545425 Q6YL49 198 aa17.25■□□□□ 0.35
FOXA1-202ENST00000545425 YAE1D1Q9NRH1 226 aa17.24■□□□□ 0.35
FOXA1-202ENST00000545425 IGLV4-69A0A075B6H9 119 aa17.24■□□□□ 0.35
FOXA1-202ENST00000545425 A8MTW9 85 aa17.24■□□□□ 0.35
FOXA1-202ENST00000545425 K7ERJ3 54 aa17.24■□□□□ 0.35
FOXA1-202ENST00000545425 M0QY20 66 aa17.24■□□□□ 0.35
FOXA1-202ENST00000545425 MUC4Q99102 2169 aa17.23■□□□□ 0.35
FOXA1-202ENST00000545425 TSHBP01222 138 aa17.23■□□□□ 0.35
FOXA1-202ENST00000545425 ZNF876PQ49A33 203 aa17.23■□□□□ 0.35
FOXA1-202ENST00000545425 Q8N1Y9 231 aa17.22■□□□□ 0.35
FOXA1-202ENST00000545425 SPANXB1Q9NS25 103 aaPredicted RBP17.22■□□□□ 0.35
FOXA1-202ENST00000545425 A0A087WWL8 130 aa17.21■□□□□ 0.35
FOXA1-202ENST00000545425 HOXA3O43365 443 aaPredicted RBP17.21■□□□□ 0.35
FOXA1-202ENST00000545425 EDN2P20800 178 aa17.21■□□□□ 0.35
FOXA1-202ENST00000545425 NFE4Q86UQ8 179 aa17.21■□□□□ 0.35
FOXA1-202ENST00000545425 PTH2Q96A98 100 aa17.21■□□□□ 0.35
FOXA1-202ENST00000545425 CRLF1O75462 422 aa17.21■□□□□ 0.35
FOXA1-202ENST00000545425 TGFAP01135 160 aa17.21■□□□□ 0.35
FOXA1-202ENST00000545425 IGHV4-31P0DP07 118 aa17.21■□□□□ 0.35
FOXA1-202ENST00000545425 COTL1Q14019 142 aa17.21■□□□□ 0.35
FOXA1-202ENST00000545425 SCGB1D4Q6XE38 83 aa17.21■□□□□ 0.35
FOXA1-202ENST00000545425 ZNF702PQ9H963 129 aa17.21■□□□□ 0.35
FOXA1-202ENST00000545425 CR1P17927 2039 aa17.2■□□□□ 0.34
FOXA1-202ENST00000545425 SYNJ2BPP57105 145 aa17.2■□□□□ 0.34
FOXA1-202ENST00000545425 ZNF56Q15929 161 aa17.2■□□□□ 0.34
FOXA1-202ENST00000545425 LYRM7Q5U5X0 104 aa17.2■□□□□ 0.34
FOXA1-202ENST00000545425 HOXD3P31249 432 aaPredicted RBP17.19■□□□□ 0.34
FOXA1-202ENST00000545425 CRYBA4P53673 196 aa17.19■□□□□ 0.34
FOXA1-202ENST00000545425 AMTNQ6UX39 209 aa17.19■□□□□ 0.34
FOXA1-202ENST00000545425 JPT2Q9H910 190 aa17.19■□□□□ 0.34
FOXA1-202ENST00000545425 I3L3M4 83 aa17.19■□□□□ 0.34
FOXA1-202ENST00000545425 J3QR89 54 aa17.19■□□□□ 0.34
FOXA1-202ENST00000545425 MDFICQ9P1T7 246 aa17.19■□□□□ 0.34
FOXA1-202ENST00000545425 Q8N2B8 174 aa17.18■□□□□ 0.34
FOXA1-202ENST00000545425 SONP18583 2426 aaKnown RBP17.18■□□□□ 0.34
FOXA1-202ENST00000545425 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.18■□□□□ 0.342e-10■□□□□ 8.7
FOXA1-202ENST00000545425 SAP30O75446 220 aa17.17■□□□□ 0.34
FOXA1-202ENST00000545425 UBE2D1P51668 147 aa17.17■□□□□ 0.34
FOXA1-202ENST00000545425 JMJD1CQ15652 2540 aa17.17■□□□□ 0.34
FOXA1-202ENST00000545425 SRSF9Q13242 221 aaKnown RBP eCLIP17.16■□□□□ 0.34
FOXA1-202ENST00000545425 SPINK13Q1W4C9 94 aa17.16■□□□□ 0.34
FOXA1-202ENST00000545425 FAM74A4Q5TZK3 123 aa17.16■□□□□ 0.34
FOXA1-202ENST00000545425 PEMTQ9UBM1 199 aa17.16■□□□□ 0.34
FOXA1-202ENST00000545425 CD300EQ496F6 205 aaPredicted RBP17.15■□□□□ 0.34
FOXA1-202ENST00000545425 C20orf203Q8NBC4 194 aa17.15■□□□□ 0.34
FOXA1-202ENST00000545425 TRAV12-2A0A075B6T6 113 aa17.14■□□□□ 0.34
FOXA1-202ENST00000545425 MORN3Q6PF18 240 aaPredicted RBP17.14■□□□□ 0.34
FOXA1-202ENST00000545425 C10orf99Q6UWK7 81 aa17.14■□□□□ 0.34
FOXA1-202ENST00000545425 SPAG8Q99932 426 aaPredicted RBP17.14■□□□□ 0.34
FOXA1-202ENST00000545425 LINC00467Q9BRT7 94 aa17.14■□□□□ 0.34
FOXA1-202ENST00000545425 PYGO1Q9Y3Y4 419 aa17.14■□□□□ 0.34
FOXA1-202ENST00000545425 A0A0J9YY99 117 aa17.14■□□□□ 0.33
FOXA1-202ENST00000545425 RPL39P62891 51 aaKnown RBP17.13■□□□□ 0.33
FOXA1-202ENST00000545425 TCTEX1D4Q5JR98 221 aa17.13■□□□□ 0.33
FOXA1-202ENST00000545425 A8MWV9 139 aa17.12■□□□□ 0.33
FOXA1-202ENST00000545425 LEPROTO15243 131 aa17.12■□□□□ 0.33
FOXA1-202ENST00000545425 TEX29Q8N6K0 151 aa17.12■□□□□ 0.33
FOXA1-202ENST00000545425 SLC25A29Q8N8R3 303 aa17.12■□□□□ 0.33
FOXA1-202ENST00000545425 WFDC12Q8WWY7 111 aa17.12■□□□□ 0.33
FOXA1-202ENST00000545425 IGKV3-20P01619 116 aa17.11■□□□□ 0.33
FOXA1-202ENST00000545425 GAGE13Q4V321 117 aa17.11■□□□□ 0.33
FOXA1-202ENST00000545425 TMEM170BQ5T4T1 132 aa17.11■□□□□ 0.33
FOXA1-202ENST00000545425 LGALS3P17931 250 aaKnown RBP17.1■□□□□ 0.33
FOXA1-202ENST00000545425 PLEKHB2Q96CS7 222 aa17.1■□□□□ 0.33
FOXA1-202ENST00000545425 J3QQQ9 107 aa17.1■□□□□ 0.33
FOXA1-202ENST00000545425 PRIMA1Q86XR5 153 aa17.1■□□□□ 0.33
FOXA1-202ENST00000545425 DUX5Q96PT3 197 aa17.1■□□□□ 0.33
FOXA1-202ENST00000545425 SELENOKQ9Y6D0 94 aa17.1■□□□□ 0.33
FOXA1-202ENST00000545425 RPL24P83731 157 aaKnown RBP17.09■□□□□ 0.33
FOXA1-202ENST00000545425 C21orf62-AS1Q17RA5 79 aa17.09■□□□□ 0.33
FOXA1-202ENST00000545425 CLUHP3Q96NS8 147 aa17.09■□□□□ 0.33
FOXA1-202ENST00000545425 MRPL16Q9NX20 251 aaKnown RBP17.09■□□□□ 0.33
FOXA1-202ENST00000545425 PGPEP1Q9NXJ5 209 aa17.09■□□□□ 0.33
FOXA1-202ENST00000545425 TMEM223A0PJW6 202 aa17.08■□□□□ 0.33
FOXA1-202ENST00000545425 ZNF415Q09FC8 603 aa17.08■□□□□ 0.33
FOXA1-202ENST00000545425 TMEM86BQ8N661 226 aa17.08■□□□□ 0.33
FOXA1-202ENST00000545425 ZNRF2Q8NHG8 242 aa17.08■□□□□ 0.33
FOXA1-202ENST00000545425 C4orf3Q8WVX3 66 aa17.08■□□□□ 0.33
FOXA1-202ENST00000545425 DLX4Q92988 240 aaPredicted RBP17.08■□□□□ 0.33
FOXA1-202ENST00000545425 AGRNO00468 2067 aa17.08■□□□□ 0.32
FOXA1-202ENST00000545425 H3BMM0 161 aa17.07■□□□□ 0.32
FOXA1-202ENST00000545425 M0R2P5 195 aa17.07■□□□□ 0.32
FOXA1-202ENST00000545425 RHODO00212 210 aa17.07■□□□□ 0.32
FOXA1-202ENST00000545425 P0DMU3 169 aa17.07■□□□□ 0.32
FOXA1-202ENST00000545425 FAM231AP0DMU4 169 aa17.07■□□□□ 0.32
FOXA1-202ENST00000545425 FAM231CP0DMU5 169 aa17.07■□□□□ 0.32
FOXA1-202ENST00000545425 VCX2Q9H322 139 aa17.07■□□□□ 0.32
FOXA1-202ENST00000545425 KLHL30-AS1Q8NEE0 82 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms