RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 NIT2Q9NQR4 276 aa9.79□□□□□ -0.84
SCARB1-209ENST00000545305 TRBV6-5A0A0K0K1A5 114 aa9.78□□□□□ -0.84
SCARB1-209ENST00000545305 K7EQD1 137 aa9.78□□□□□ -0.84
SCARB1-209ENST00000545305 CHCHD1Q96BP2 118 aaKnown RBP9.78□□□□□ -0.84
SCARB1-209ENST00000545305 SMIM2Q9BVW6 85 aa9.78□□□□□ -0.84
SCARB1-209ENST00000545305 NBEAL2Q6ZNJ1 2754 aa9.77□□□□□ -0.84
SCARB1-209ENST00000545305 A0A0J9YWU9 116 aa9.77□□□□□ -0.85
SCARB1-209ENST00000545305 C5orf52A6NGY3 159 aa9.77□□□□□ -0.85
SCARB1-209ENST00000545305 ATP5G1P05496 136 aa9.77□□□□□ -0.85
SCARB1-209ENST00000545305 S100A2P29034 98 aa9.77□□□□□ -0.85
SCARB1-209ENST00000545305 IFI27P40305 119 aaPredicted RBP9.77□□□□□ -0.85
SCARB1-209ENST00000545305 Q6ZSN1 163 aa9.77□□□□□ -0.85
SCARB1-209ENST00000545305 NIT1Q86X76 327 aa9.77□□□□□ -0.85
SCARB1-209ENST00000545305 Q8N8P6 123 aa9.77□□□□□ -0.85
SCARB1-209ENST00000545305 DNAJC30Q96LL9 226 aa9.77□□□□□ -0.85
SCARB1-209ENST00000545305 TNFRSF18Q9Y5U5 241 aa9.77□□□□□ -0.85
SCARB1-209ENST00000545305 TRBV10-1A0A0K0K1A3 114 aa9.76□□□□□ -0.85
SCARB1-209ENST00000545305 TRBV6-4A0A1B0GX49 114 aa9.76□□□□□ -0.85
SCARB1-209ENST00000545305 PRSS47A8MTI9 375 aa9.76□□□□□ -0.85
SCARB1-209ENST00000545305 HSBP1O75506 76 aa9.76□□□□□ -0.85
SCARB1-209ENST00000545305 LINC00614P0C842 121 aa9.76□□□□□ -0.85
SCARB1-209ENST00000545305 HOXA5P20719 270 aa9.76□□□□□ -0.85
SCARB1-209ENST00000545305 RPL32P62910 135 aaKnown RBP9.76□□□□□ -0.85
SCARB1-209ENST00000545305 DEFA6Q01524 100 aa9.76□□□□□ -0.85
SCARB1-209ENST00000545305 FHL2Q14192 279 aa9.76□□□□□ -0.85
SCARB1-209ENST00000545305 RHOHQ15669 191 aa9.76□□□□□ -0.85
SCARB1-209ENST00000545305 PRADC1Q9BSG0 188 aa9.76□□□□□ -0.85
SCARB1-209ENST00000545305 AP5S1Q9NUS5 200 aa9.76□□□□□ -0.85
SCARB1-209ENST00000545305 SDHAF1A6NFY7 115 aa9.75□□□□□ -0.85
SCARB1-209ENST00000545305 P0DMU3 169 aa9.75□□□□□ -0.85
SCARB1-209ENST00000545305 FAM231AP0DMU4 169 aa9.75□□□□□ -0.85
SCARB1-209ENST00000545305 FAM231CP0DMU5 169 aa9.75□□□□□ -0.85
SCARB1-209ENST00000545305 ESDP10768 282 aa9.75□□□□□ -0.85
SCARB1-209ENST00000545305 LINC00310P59036 64 aa9.75□□□□□ -0.85
SCARB1-209ENST00000545305 RPL36AP83881 106 aaKnown RBP9.75□□□□□ -0.85
SCARB1-209ENST00000545305 PDZD11Q5EBL8 140 aa9.75□□□□□ -0.85
SCARB1-209ENST00000545305 SLC25A29Q8N8R3 303 aa9.75□□□□□ -0.85
SCARB1-209ENST00000545305 NEXN-AS1Q8NBZ9 246 aa9.75□□□□□ -0.85
SCARB1-209ENST00000545305 RPL36ALQ969Q0 106 aaKnown RBP9.75□□□□□ -0.85
SCARB1-209ENST00000545305 TMEM70Q9BUB7 260 aa9.75□□□□□ -0.85
SCARB1-209ENST00000545305 VCYO14598 125 aa9.74□□□□□ -0.85
SCARB1-209ENST00000545305 HTN3P15516 51 aa9.74□□□□□ -0.85
SCARB1-209ENST00000545305 HIST3H2BBQ8N257 126 aa9.74□□□□□ -0.85
SCARB1-209ENST00000545305 URB1-AS1Q96HZ7 61 aa9.74□□□□□ -0.85
SCARB1-209ENST00000545305 KIR2DL4Q99706 377 aa9.74□□□□□ -0.85
SCARB1-209ENST00000545305 PRO0255Q9UI72 69 aa9.74□□□□□ -0.85
SCARB1-209ENST00000545305 HHLA3Q9XRX5 114 aa9.74□□□□□ -0.85
SCARB1-209ENST00000545305 TCAPO15273 167 aa9.73□□□□□ -0.85
SCARB1-209ENST00000545305 NHLRC4P0CG21 123 aaPredicted RBP9.73□□□□□ -0.85
SCARB1-209ENST00000545305 AMTP48728 403 aa9.73□□□□□ -0.85
SCARB1-209ENST00000545305 POLR2KP53803 58 aaKnown RBP9.73□□□□□ -0.85
SCARB1-209ENST00000545305 C11orf45Q8TAV5 145 aa9.73□□□□□ -0.85
SCARB1-209ENST00000545305 TMEM18Q96B42 140 aa9.73□□□□□ -0.85
SCARB1-209ENST00000545305 IGLV2-18A0A075B6J9 118 aa9.72□□□□□ -0.85
SCARB1-209ENST00000545305 TRBV7-3A0A075B6L6 115 aa9.72□□□□□ -0.85
SCARB1-209ENST00000545305 TRBV27A0A0K0K1C4 114 aa9.72□□□□□ -0.85
SCARB1-209ENST00000545305 F5H768 121 aa9.72□□□□□ -0.85
SCARB1-209ENST00000545305 K7EMI3 77 aa9.72□□□□□ -0.85
SCARB1-209ENST00000545305 NUPR1O60356 82 aa9.72□□□□□ -0.85
SCARB1-209ENST00000545305 FCER1GP30273 86 aa9.72□□□□□ -0.85
SCARB1-209ENST00000545305 C12orf74Q32Q52 190 aa9.72□□□□□ -0.85
SCARB1-209ENST00000545305 ZNRF2Q8NHG8 242 aa9.72□□□□□ -0.85
SCARB1-209ENST00000545305 GAGE12JA6NER3 117 aa9.71□□□□□ -0.86
SCARB1-209ENST00000545305 LINC01546A6NGU7 62 aa9.71□□□□□ -0.86
SCARB1-209ENST00000545305 I3L3M4 83 aa9.71□□□□□ -0.86
SCARB1-209ENST00000545305 PAX4O43316 350 aa9.71□□□□□ -0.86
SCARB1-209ENST00000545305 CRYBA4P53673 196 aa9.71□□□□□ -0.86
SCARB1-209ENST00000545305 GAGE1Q13065 139 aa9.71□□□□□ -0.86
SCARB1-209ENST00000545305 GAGE4Q13068 117 aa9.71□□□□□ -0.86
SCARB1-209ENST00000545305 GAGE5Q13069 117 aa9.71□□□□□ -0.86
SCARB1-209ENST00000545305 LAGE3Q14657 143 aa9.71□□□□□ -0.86
SCARB1-209ENST00000545305 GAGE13Q4V321 117 aa9.71□□□□□ -0.86
SCARB1-209ENST00000545305 ORMDL2Q53FV1 153 aa9.71□□□□□ -0.86
SCARB1-209ENST00000545305 NEGR1Q7Z3B1 354 aa9.71□□□□□ -0.86
SCARB1-209ENST00000545305 IGHV1-24A0A0C4DH33 117 aa9.7□□□□□ -0.86
SCARB1-209ENST00000545305 FABP4P15090 132 aa9.7□□□□□ -0.86
SCARB1-209ENST00000545305 FAM19A2Q8N3H0 131 aa9.7□□□□□ -0.86
SCARB1-209ENST00000545305 NUDT3O95989 172 aa9.69□□□□□ -0.86
SCARB1-209ENST00000545305 HBDP02042 147 aa9.69□□□□□ -0.86
SCARB1-209ENST00000545305 GYPEP15421 78 aa9.69□□□□□ -0.86
SCARB1-209ENST00000545305 G0S2P27469 103 aa9.69□□□□□ -0.86
SCARB1-209ENST00000545305 NANOS2P60321 138 aaKnown RBP9.69□□□□□ -0.86
SCARB1-209ENST00000545305 UBE2D3P61077 147 aa9.69□□□□□ -0.86
SCARB1-209ENST00000545305 UBE2D2P62837 147 aa9.69□□□□□ -0.86
SCARB1-209ENST00000545305 COTL1Q14019 142 aa9.69□□□□□ -0.86
SCARB1-209ENST00000545305 PMCHL1Q16048 86 aa9.69□□□□□ -0.86
SCARB1-209ENST00000545305 Q6ZTC4 211 aa9.69□□□□□ -0.86
SCARB1-209ENST00000545305 FBN3Q75N90 2809 aa9.69□□□□□ -0.86
SCARB1-209ENST00000545305 DAZ4Q86SG3 579 aaKnown RBP9.69□□□□□ -0.86
SCARB1-209ENST00000545305 PHLDA1Q8WV24 401 aaPredicted RBP9.69□□□□□ -0.86
SCARB1-209ENST00000545305 PACRGQ96M98 296 aaPredicted RBP9.69□□□□□ -0.86
SCARB1-209ENST00000545305 HIST1H2BLQ99880 126 aa9.69□□□□□ -0.86
SCARB1-209ENST00000545305 DAZ3Q9NR90 486 aaKnown RBP9.69□□□□□ -0.86
SCARB1-209ENST00000545305 Q9UF83 564 aa9.69□□□□□ -0.86
SCARB1-209ENST00000545305 TRAV26-1A0A087WT03 109 aa9.68□□□□□ -0.86
SCARB1-209ENST00000545305 A0A0J9YY99 117 aa9.68□□□□□ -0.86
SCARB1-209ENST00000545305 LOC100131303A0A0U1RQF7 123 aa9.68□□□□□ -0.86
SCARB1-209ENST00000545305 IGHV3-38A0A0C4DH36 116 aa9.67□□□□□ -0.86
SCARB1-209ENST00000545305 TSHBP01222 138 aa9.67□□□□□ -0.86
SCARB1-209ENST00000545305 BTF3P20290 206 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms