RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 NDUFB6O95139 128 aa0.41□□□□□ -2.34
LEMD3-206ENST00000545026 F8P00451 2351 aa0.41□□□□□ -2.34
LEMD3-206ENST00000545026 MDN1Q9NU22 5596 aa0.4□□□□□ -2.35
LEMD3-206ENST00000545026 TRGV1A0A0A0MS02 117 aa0.4□□□□□ -2.35
LEMD3-206ENST00000545026 CBLN1P23435 193 aa0.4□□□□□ -2.35
LEMD3-206ENST00000545026 BICRAQ9NZM4 1560 aa0.4□□□□□ -2.35
LEMD3-206ENST00000545026 IGF2RP11717 2491 aa0.39□□□□□ -2.35
LEMD3-206ENST00000545026 SNCGO76070 127 aa0.39□□□□□ -2.35
LEMD3-206ENST00000545026 NMBP08949 121 aa0.39□□□□□ -2.35
LEMD3-206ENST00000545026 Q6ZRX8 168 aa0.39□□□□□ -2.35
LEMD3-206ENST00000545026 SPTSSBQ8NFR3 76 aa0.39□□□□□ -2.35
LEMD3-206ENST00000545026 DPH3Q96FX2 82 aa0.39□□□□□ -2.35
LEMD3-206ENST00000545026 UNC13BO14795 1591 aa0.39□□□□□ -2.35
LEMD3-206ENST00000545026 GRIN2AQ12879 1464 aa0.38□□□□□ -2.35
LEMD3-206ENST00000545026 TMEM14DPA8MWL7 114 aa0.38□□□□□ -2.35
LEMD3-206ENST00000545026 S100A7L2Q5SY68 101 aa0.38□□□□□ -2.35
LEMD3-206ENST00000545026 CCDC167Q9P0B6 97 aa0.38□□□□□ -2.35
LEMD3-206ENST00000545026 ARPC4P59998 168 aa0.36□□□□□ -2.35
LEMD3-206ENST00000545026 INSL4Q14641 139 aa0.36□□□□□ -2.35
LEMD3-206ENST00000545026 ZNF818PQ6ZRF7 136 aa0.36□□□□□ -2.35
LEMD3-206ENST00000545026 S100A12P80511 92 aa0.35□□□□□ -2.35
LEMD3-206ENST00000545026 COX6A2Q02221 97 aa0.35□□□□□ -2.35
LEMD3-206ENST00000545026 WFDC6Q9BQY6 131 aa0.35□□□□□ -2.35
LEMD3-206ENST00000545026 SCP2D1Q9UJQ7 156 aa0.35□□□□□ -2.35
LEMD3-206ENST00000545026 DOCK11Q5JSL3 2073 aa0.34□□□□□ -2.35
LEMD3-206ENST00000545026 APOC4-APOC2K7ER74 178 aa0.34□□□□□ -2.36
LEMD3-206ENST00000545026 PARP14Q460N5 1801 aa0.34□□□□□ -2.36
LEMD3-206ENST00000545026 TRBV10-3A0A0K0K1G6 114 aa0.33□□□□□ -2.36
LEMD3-206ENST00000545026 NDUFA2O43678 99 aa0.33□□□□□ -2.36
LEMD3-206ENST00000545026 ZNF518AQ6AHZ1 1483 aa0.33□□□□□ -2.36
LEMD3-206ENST00000545026 ARFGEF1Q9Y6D6 1849 aa0.32□□□□□ -2.36
LEMD3-206ENST00000545026 IGSF10Q6WRI0 2623 aa0.32□□□□□ -2.36
LEMD3-206ENST00000545026 GCHFRP30047 84 aa0.32□□□□□ -2.36
LEMD3-206ENST00000545026 CCL8P80075 99 aa0.32□□□□□ -2.36
LEMD3-206ENST00000545026 CCDC58Q4VC31 144 aa0.32□□□□□ -2.36
LEMD3-206ENST00000545026 GOLGA3Q08378 1498 aa0.32□□□□□ -2.36
LEMD3-206ENST00000545026 OTOGQ6ZRI0 2925 aa0.31□□□□□ -2.36
LEMD3-206ENST00000545026 FAM92AA1XBS5 289 aa0.31□□□□□ -2.36
LEMD3-206ENST00000545026 HIST1H1DP16402 221 aaKnown RBP0.31□□□□□ -2.36
LEMD3-206ENST00000545026 SEC11CQ9BY50 192 aa0.31□□□□□ -2.36
LEMD3-206ENST00000545026 LINC00312Q9Y6C7 94 aa0.31□□□□□ -2.36
LEMD3-206ENST00000545026 CELSR2Q9HCU4 2923 aa0.31□□□□□ -2.36
LEMD3-206ENST00000545026 IFT140Q96RY7 1462 aa0.3□□□□□ -2.36
LEMD3-206ENST00000545026 SIPA1L3O60292 1781 aaPredicted RBP0.3□□□□□ -2.36
LEMD3-206ENST00000545026 Q5BKY6 102 aa0.3□□□□□ -2.36
LEMD3-206ENST00000545026 PDCD10Q9BUL8 212 aa0.3□□□□□ -2.36
LEMD3-206ENST00000545026 CASKIN1Q8WXD9 1431 aa0.3□□□□□ -2.36
LEMD3-206ENST00000545026 TRAV1-2A0A0B4J238 106 aa0.29□□□□□ -2.36
LEMD3-206ENST00000545026 ZMYM4Q5VZL5 1548 aa0.28□□□□□ -2.36
LEMD3-206ENST00000545026 NCOR2Q9Y618 2525 aa0.28□□□□□ -2.36
LEMD3-206ENST00000545026 G3V318 75 aa0.28□□□□□ -2.36
LEMD3-206ENST00000545026 SELENOWP63302 87 aa0.28□□□□□ -2.36
LEMD3-206ENST00000545026 ARL11Q969Q4 196 aa0.28□□□□□ -2.36
LEMD3-206ENST00000545026 LINC00470Q9BZP3 86 aa0.28□□□□□ -2.36
LEMD3-206ENST00000545026 FAM107BQ9H098 131 aa0.28□□□□□ -2.36
LEMD3-206ENST00000545026 UNC79Q9P2D8 2635 aa0.26□□□□□ -2.37
LEMD3-206ENST00000545026 HMGN1P05114 100 aa0.26□□□□□ -2.37
LEMD3-206ENST00000545026 AGPAT4-IT1Q9H0P7 198 aa0.26□□□□□ -2.37
LEMD3-206ENST00000545026 LRRC37A3O60309 1634 aa0.26□□□□□ -2.37
LEMD3-206ENST00000545026 ASXL3Q9C0F0 2248 aa0.26□□□□□ -2.37
LEMD3-206ENST00000545026 LRP1Q07954 4544 aaKnown RBP0.26□□□□□ -2.37
LEMD3-206ENST00000545026 SPINK1P00995 79 aa0.25□□□□□ -2.37
LEMD3-206ENST00000545026 Q5VV11 94 aa0.25□□□□□ -2.37
LEMD3-206ENST00000545026 LSM10Q969L4 123 aaKnown RBP0.25□□□□□ -2.37
LEMD3-206ENST00000545026 SPEF2Q9C093 1822 aa0.24□□□□□ -2.37
LEMD3-206ENST00000545026 GNG7O60262 68 aa0.24□□□□□ -2.37
LEMD3-206ENST00000545026 SIX6O95475 246 aa0.24□□□□□ -2.37
LEMD3-206ENST00000545026 COPS9Q8WXC6 57 aa0.24□□□□□ -2.37
LEMD3-206ENST00000545026 SNRNP25Q9BV90 132 aaKnown RBP0.24□□□□□ -2.37
LEMD3-206ENST00000545026 CFTRP13569 1480 aa0.23□□□□□ -2.37
LEMD3-206ENST00000545026 CHD9Q3L8U1 2897 aa0.23□□□□□ -2.37
LEMD3-206ENST00000545026 HCG22E2RYF7 251 aa0.23□□□□□ -2.37
LEMD3-206ENST00000545026 BAGE3Q86Y29 109 aa0.23□□□□□ -2.37
LEMD3-206ENST00000545026 SSPOA2VEC9 5147 aa0.22□□□□□ -2.37
LEMD3-206ENST00000545026 FAM25AB3EWG3 89 aa0.22□□□□□ -2.37
LEMD3-206ENST00000545026 FAM25CB3EWG5 89 aa0.22□□□□□ -2.37
LEMD3-206ENST00000545026 FAM25GB3EWG6 89 aa0.22□□□□□ -2.37
LEMD3-206ENST00000545026 RBM3P98179 157 aaKnown RBP0.22□□□□□ -2.37
LEMD3-206ENST00000545026 UBE2DNLQ8IWF7 75 aa0.22□□□□□ -2.37
LEMD3-206ENST00000545026 TSC22D3Q99576 134 aa0.22□□□□□ -2.37
LEMD3-206ENST00000545026 ANKRD17O75179 2603 aaKnown RBP0.22□□□□□ -2.37
LEMD3-206ENST00000545026 PXDNQ92626 1479 aa0.22□□□□□ -2.37
LEMD3-206ENST00000545026 HRNRQ86YZ3 2850 aaPredicted RBP0.21□□□□□ -2.38
LEMD3-206ENST00000545026 TRAV13-2A0A0B4J235 113 aa0.21□□□□□ -2.38
LEMD3-206ENST00000545026 SPAARA0A1B0GVQ0 90 aa0.21□□□□□ -2.38
LEMD3-206ENST00000545026 Q8N8P6 123 aa0.21□□□□□ -2.38
LEMD3-206ENST00000545026 RERGLQ9H628 205 aa0.21□□□□□ -2.38
LEMD3-206ENST00000545026 SERP1Q9Y6X1 66 aa0.21□□□□□ -2.38
LEMD3-206ENST00000545026 K7EP13 123 aa0.2□□□□□ -2.38
LEMD3-206ENST00000545026 Q6AWC8 147 aa0.2□□□□□ -2.38
LEMD3-206ENST00000545026 SSBP3-AS1Q7Z2R9 100 aa0.2□□□□□ -2.38
LEMD3-206ENST00000545026 FAM213BQ8TBF2 198 aa0.2□□□□□ -2.38
LEMD3-206ENST00000545026 DMBT1Q9UGM3 2413 aaPredicted RBP0.2□□□□□ -2.38
LEMD3-206ENST00000545026 ZNF815PA8K554 130 aa0.19□□□□□ -2.38
LEMD3-206ENST00000545026 SMIM6P0DI80 62 aa0.19□□□□□ -2.38
LEMD3-206ENST00000545026 CCL18P55774 89 aa0.19□□□□□ -2.38
LEMD3-206ENST00000545026 MEIG1Q5JSS6 88 aa0.19□□□□□ -2.38
LEMD3-206ENST00000545026 C12orf73Q69YU5 71 aa0.19□□□□□ -2.38
LEMD3-206ENST00000545026 PHLPP1O60346 1717 aa0.18□□□□□ -2.38
LEMD3-206ENST00000545026 IFT172Q9UG01 1749 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms