RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 RRN3P1Q2M238 152 aa9.99□□□□□ -0.81
PPME1-208ENST00000543525 ZNF702PQ9H963 129 aa9.99□□□□□ -0.81
PPME1-208ENST00000543525 AKAP9Q99996 3911 aa9.99□□□□□ -0.81
PPME1-208ENST00000543525 FSHBP01225 129 aa9.98□□□□□ -0.81
PPME1-208ENST00000543525 ZNF256Q9Y2P7 627 aaPredicted RBP9.98□□□□□ -0.81
PPME1-208ENST00000543525 NSUN5P1Q3KNT7 163 aa9.97□□□□□ -0.81
PPME1-208ENST00000543525 DUX5Q96PT3 197 aa9.97□□□□□ -0.81
PPME1-208ENST00000543525 F8W1H4 67 aa9.97□□□□□ -0.81
PPME1-208ENST00000543525 SRSF9Q13242 221 aaKnown RBP eCLIP9.97□□□□□ -0.81
PPME1-208ENST00000543525 TCTEX1D4Q5JR98 221 aa9.97□□□□□ -0.81
PPME1-208ENST00000543525 MORN3Q6PF18 240 aaPredicted RBP9.97□□□□□ -0.81
PPME1-208ENST00000543525 AMTNQ6UX39 209 aa9.97□□□□□ -0.81
PPME1-208ENST00000543525 MAPK1IP1LQ8NDC0 245 aa9.97□□□□□ -0.81
PPME1-208ENST00000543525 DEFB104AQ8WTQ1 72 aa9.97□□□□□ -0.81
PPME1-208ENST00000543525 PLEKHB2Q96CS7 222 aa9.97□□□□□ -0.81
PPME1-208ENST00000543525 ZNF876PQ49A33 203 aa9.96□□□□□ -0.81
PPME1-208ENST00000543525 CELSR1Q9NYQ6 3014 aa9.96□□□□□ -0.81
PPME1-208ENST00000543525 DNHD1Q96M86 4753 aa9.96□□□□□ -0.81
PPME1-208ENST00000543525 I3L3M4 83 aa9.95□□□□□ -0.82
PPME1-208ENST00000543525 EMP1P54849 157 aa9.95□□□□□ -0.82
PPME1-208ENST00000543525 RPL24P83731 157 aaKnown RBP9.95□□□□□ -0.82
PPME1-208ENST00000543525 COTL1Q14019 142 aa9.95□□□□□ -0.82
PPME1-208ENST00000543525 TMEM170BQ5T4T1 132 aa9.95□□□□□ -0.82
PPME1-208ENST00000543525 IGHV4-31P0DP07 118 aa9.95□□□□□ -0.82
PPME1-208ENST00000543525 KLHL30-AS1Q8NEE0 82 aa9.95□□□□□ -0.82
PPME1-208ENST00000543525 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.94□□□□□ -0.823e-7■■■□□ 17.4
PPME1-208ENST00000543525 FBN3Q75N90 2809 aa9.94□□□□□ -0.82
PPME1-208ENST00000543525 NFE4Q86UQ8 179 aa9.94□□□□□ -0.82
PPME1-208ENST00000543525 ZNRF2Q8NHG8 242 aa9.94□□□□□ -0.82
PPME1-208ENST00000543525 BEX4Q9NWD9 120 aaPredicted RBP9.94□□□□□ -0.82
PPME1-208ENST00000543525 TRAV2A0A0B4J234 112 aa9.93□□□□□ -0.82
PPME1-208ENST00000543525 A0A0J9YY99 117 aa9.93□□□□□ -0.82
PPME1-208ENST00000543525 KNCNA6PVL3 124 aa9.93□□□□□ -0.82
PPME1-208ENST00000543525 C20orf203Q8NBC4 194 aa9.93□□□□□ -0.82
PPME1-208ENST00000543525 EDA2RQ9HAV5 297 aa9.93□□□□□ -0.82
PPME1-208ENST00000543525 SPANXB1Q9NS25 103 aaPredicted RBP9.93□□□□□ -0.82
PPME1-208ENST00000543525 LGALS3P17931 250 aaKnown RBP9.92□□□□□ -0.82
PPME1-208ENST00000543525 UBE2D1P51668 147 aa9.92□□□□□ -0.82
PPME1-208ENST00000543525 SLURP1P55000 103 aa9.92□□□□□ -0.82
PPME1-208ENST00000543525 DEFB131AP59861 70 aa9.92□□□□□ -0.82
PPME1-208ENST00000543525 GAGE13Q4V321 117 aa9.92□□□□□ -0.82
PPME1-208ENST00000543525 MRPL16Q9NX20 251 aaKnown RBP9.92□□□□□ -0.82
PPME1-208ENST00000543525 PGPEP1Q9NXJ5 209 aa9.92□□□□□ -0.82
PPME1-208ENST00000543525 AGRNO00468 2067 aa9.92□□□□□ -0.82
PPME1-208ENST00000543525 TEX48A0A1B0GUV7 120 aa9.92□□□□□ -0.82
PPME1-208ENST00000543525 A8MTW9 85 aa9.92□□□□□ -0.82
PPME1-208ENST00000543525 H3BMG7 143 aa9.92□□□□□ -0.82
PPME1-208ENST00000543525 P0DMU3 169 aa9.92□□□□□ -0.82
PPME1-208ENST00000543525 FAM231AP0DMU4 169 aa9.92□□□□□ -0.82
PPME1-208ENST00000543525 FAM231CP0DMU5 169 aa9.92□□□□□ -0.82
PPME1-208ENST00000543525 PEMTQ9UBM1 199 aa9.92□□□□□ -0.82
PPME1-208ENST00000543525 J3QQQ9 107 aa9.91□□□□□ -0.82
PPME1-208ENST00000543525 LEPROTO15243 131 aa9.91□□□□□ -0.82
PPME1-208ENST00000543525 WFDC2Q14508 124 aa9.91□□□□□ -0.82
PPME1-208ENST00000543525 Q8N2B8 174 aa9.91□□□□□ -0.82
PPME1-208ENST00000543525 MTORP42345 2549 aa9.9□□□□□ -0.82
PPME1-208ENST00000543525 CSMD2Q7Z408 3487 aa9.9□□□□□ -0.82
PPME1-208ENST00000543525 H3BMM0 161 aa9.9□□□□□ -0.82
PPME1-208ENST00000543525 RBMY1A1P0DJD3 496 aaKnown RBP9.9□□□□□ -0.82
PPME1-208ENST00000543525 RBMY1CP0DJD4 496 aa9.9□□□□□ -0.82
PPME1-208ENST00000543525 TSPEAR-AS2P59090 65 aa9.9□□□□□ -0.82
PPME1-208ENST00000543525 RBMY1FQ15415 496 aaKnown RBP9.9□□□□□ -0.82
PPME1-208ENST00000543525 Q5PR19 223 aa9.9□□□□□ -0.82
PPME1-208ENST00000543525 SLC25A29Q8N8R3 303 aa9.9□□□□□ -0.82
PPME1-208ENST00000543525 VCX2Q9H322 139 aa9.9□□□□□ -0.82
PPME1-208ENST00000543525 SVEP1Q4LDE5 3571 aa9.9□□□□□ -0.83
PPME1-208ENST00000543525 TMEM223A0PJW6 202 aa9.9□□□□□ -0.83
PPME1-208ENST00000543525 A8MWV9 139 aa9.9□□□□□ -0.83
PPME1-208ENST00000543525 J3QR89 54 aa9.9□□□□□ -0.83
PPME1-208ENST00000543525 LYRM7Q5U5X0 104 aa9.9□□□□□ -0.83
PPME1-208ENST00000543525 DUX3Q96PT4 197 aa9.9□□□□□ -0.83
PPME1-208ENST00000543525 OPRPNQ99935 248 aaPredicted RBP9.9□□□□□ -0.83
PPME1-208ENST00000543525 HTN1P15515 57 aa9.89□□□□□ -0.83
PPME1-208ENST00000543525 ZNF415Q09FC8 603 aa9.89□□□□□ -0.83
PPME1-208ENST00000543525 DEFB136Q30KP8 78 aa9.89□□□□□ -0.83
PPME1-208ENST00000543525 PIK3CD-AS1Q5SR53 167 aa9.89□□□□□ -0.83
PPME1-208ENST00000543525 C18orf65Q6ZTR6 163 aa9.89□□□□□ -0.83
PPME1-208ENST00000543525 SPG11Q96JI7 2443 aa9.88□□□□□ -0.83
PPME1-208ENST00000543525 IGLV4-3A0A075B6K6 122 aa9.88□□□□□ -0.83
PPME1-208ENST00000543525 M0R2P5 195 aa9.88□□□□□ -0.83
PPME1-208ENST00000543525 IGHV3-30P01768 117 aa9.88□□□□□ -0.83
PPME1-208ENST00000543525 IGHV3-30-5P0DP03 117 aa9.88□□□□□ -0.83
PPME1-208ENST00000543525 LRRC75A-AS1Q8N1F1 130 aa9.88□□□□□ -0.83
PPME1-208ENST00000543525 C4orf3Q8WVX3 66 aa9.88□□□□□ -0.83
PPME1-208ENST00000543525 DLX4Q92988 240 aaPredicted RBP9.88□□□□□ -0.83
PPME1-208ENST00000543525 PTH2Q96A98 100 aa9.88□□□□□ -0.83
PPME1-208ENST00000543525 SPAG8Q99932 426 aaPredicted RBP9.88□□□□□ -0.83
PPME1-208ENST00000543525 PYGO1Q9Y3Y4 419 aa9.88□□□□□ -0.83
PPME1-208ENST00000543525 APOMO95445 188 aa9.88□□□□□ -0.83
PPME1-208ENST00000543525 TSPAN13O95857 204 aa9.88□□□□□ -0.83
PPME1-208ENST00000543525 DEFB113Q30KQ7 82 aa9.88□□□□□ -0.83
PPME1-208ENST00000543525 NDUFA11Q86Y39 141 aa9.88□□□□□ -0.83
PPME1-208ENST00000543525 DYNLRB2Q8TF09 96 aa9.88□□□□□ -0.83
PPME1-208ENST00000543525 AMELXQ99217 191 aa9.88□□□□□ -0.83
PPME1-208ENST00000543525 PRO0461Q9UI25 63 aa9.88□□□□□ -0.83
PPME1-208ENST00000543525 TNFRSF18Q9Y5U5 241 aa9.88□□□□□ -0.83
PPME1-208ENST00000543525 RHODO00212 210 aa9.87□□□□□ -0.83
PPME1-208ENST00000543525 ZNF22P17026 224 aaPredicted RBP9.87□□□□□ -0.83
PPME1-208ENST00000543525 CRYBA4P53673 196 aa9.87□□□□□ -0.83
PPME1-208ENST00000543525 CSPG4Q6UVK1 2322 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms