RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 DIRAS2Q96HU8 199 aa1.78□□□□□ -2.12
CHD4-209ENST00000542717 FAM167A-AS1Q96KT0 104 aa1.78□□□□□ -2.12
CHD4-209ENST00000542717 TREM1Q9NP99 234 aa1.78□□□□□ -2.12
CHD4-209ENST00000542717 UQCC1Q9NVA1 299 aa1.78□□□□□ -2.12
CHD4-209ENST00000542717 RSL24D1Q9UHA3 163 aaKnown RBP1.78□□□□□ -2.12
CHD4-209ENST00000542717 TRBV10-1A0A0K0K1A3 114 aa1.77□□□□□ -2.13
CHD4-209ENST00000542717 FAM168BA1KXE4 195 aa1.77□□□□□ -2.13
CHD4-209ENST00000542717 F6UZH7 168 aa1.77□□□□□ -2.13
CHD4-209ENST00000542717 L7N2F9 121 aa1.77□□□□□ -2.13
CHD4-209ENST00000542717 M0QXV9 152 aa1.77□□□□□ -2.13
CHD4-209ENST00000542717 CST7O76096 145 aa1.77□□□□□ -2.13
CHD4-209ENST00000542717 MBPP02686 304 aaPredicted RBP1.77□□□□□ -2.13
CHD4-209ENST00000542717 MT2AP02795 61 aa1.77□□□□□ -2.13
CHD4-209ENST00000542717 RNASE3P12724 160 aaKnown RBP1.77□□□□□ -2.13
CHD4-209ENST00000542717 FGF7P21781 194 aa1.77□□□□□ -2.13
CHD4-209ENST00000542717 S100A4P26447 101 aaKnown RBP1.77□□□□□ -2.13
CHD4-209ENST00000542717 S100A11P31949 105 aa1.77□□□□□ -2.13
CHD4-209ENST00000542717 RPL28P46779 137 aaKnown RBP1.77□□□□□ -2.13
CHD4-209ENST00000542717 AP3S2P59780 193 aa1.77□□□□□ -2.13
CHD4-209ENST00000542717 VAMP2P63027 116 aa1.77□□□□□ -2.13
CHD4-209ENST00000542717 UBE2L3P68036 154 aaKnown RBP1.77□□□□□ -2.13
CHD4-209ENST00000542717 CTF1Q16619 201 aa1.77□□□□□ -2.13
CHD4-209ENST00000542717 TMEM97Q5BJF2 176 aa1.77□□□□□ -2.13
CHD4-209ENST00000542717 SPAG11AQ6PDA7 123 aa1.77□□□□□ -2.13
CHD4-209ENST00000542717 GOLT1AQ6ZVE7 132 aa1.77□□□□□ -2.13
CHD4-209ENST00000542717 TOMM5Q8N4H5 51 aa1.77□□□□□ -2.13
CHD4-209ENST00000542717 C20orf203Q8NBC4 194 aa1.77□□□□□ -2.13
CHD4-209ENST00000542717 CMTM2Q8TAZ6 248 aa1.77□□□□□ -2.13
CHD4-209ENST00000542717 DEDD2Q8WXF8 326 aa1.77□□□□□ -2.13
CHD4-209ENST00000542717 HYLS1Q96M11 299 aa1.77□□□□□ -2.13
CHD4-209ENST00000542717 SDHCQ99643 169 aaPredicted RBP1.77□□□□□ -2.13
CHD4-209ENST00000542717 BCL7BQ9BQE9 202 aa1.77□□□□□ -2.13
CHD4-209ENST00000542717 DERL1Q9BUN8 251 aa1.77□□□□□ -2.13
CHD4-209ENST00000542717 NPCDR1Q9BY65 106 aa1.77□□□□□ -2.13
CHD4-209ENST00000542717 KRTAP9-3Q9BYQ3 159 aa1.77□□□□□ -2.13
CHD4-209ENST00000542717 SLIRPQ9GZT3 109 aaKnown RBP1.77□□□□□ -2.13
CHD4-209ENST00000542717 JPT2Q9H910 190 aa1.77□□□□□ -2.13
CHD4-209ENST00000542717 GSKIPQ9P0R6 139 aa1.77□□□□□ -2.13
CHD4-209ENST00000542717 C11orf21Q9P2W6 132 aa1.77□□□□□ -2.13
CHD4-209ENST00000542717 IGLV4-60A0A075B6I1 120 aa1.76□□□□□ -2.13
CHD4-209ENST00000542717 IGKV3D-20A0A0C4DH25 116 aa1.76□□□□□ -2.13
CHD4-209ENST00000542717 IGHV1-58A0A0C4DH39 117 aa1.76□□□□□ -2.13
CHD4-209ENST00000542717 UBE2L6O14933 153 aa1.76□□□□□ -2.13
CHD4-209ENST00000542717 OR7C2O60412 319 aa1.76□□□□□ -2.13
CHD4-209ENST00000542717 TNFRSF6BO95407 300 aa1.76□□□□□ -2.13
CHD4-209ENST00000542717 APOMO95445 188 aa1.76□□□□□ -2.13
CHD4-209ENST00000542717 GCGP01275 180 aa1.76□□□□□ -2.13
CHD4-209ENST00000542717 SULT1A1P50225 295 aa1.76□□□□□ -2.13
CHD4-209ENST00000542717 ZNF80P51504 273 aaPredicted RBP1.76□□□□□ -2.13
CHD4-209ENST00000542717 HBG1P69891 147 aa1.76□□□□□ -2.13
CHD4-209ENST00000542717 HBG2P69892 147 aa1.76□□□□□ -2.13
CHD4-209ENST00000542717 ATP6V1FQ16864 119 aa1.76□□□□□ -2.13
CHD4-209ENST00000542717 RNF151Q2KHN1 245 aa1.76□□□□□ -2.13
CHD4-209ENST00000542717 SPANXN2Q5MJ10 180 aa1.76□□□□□ -2.13
CHD4-209ENST00000542717 FAM74A1Q5RGS3 127 aa1.76□□□□□ -2.13
CHD4-209ENST00000542717 STX12Q86Y82 276 aa1.76□□□□□ -2.13
CHD4-209ENST00000542717 TMEM252Q8N6L7 170 aa1.76□□□□□ -2.13
CHD4-209ENST00000542717 OR10G8Q8NGN5 311 aa1.76□□□□□ -2.13
CHD4-209ENST00000542717 MITD1Q8WV92 249 aa1.76□□□□□ -2.13
CHD4-209ENST00000542717 CHCHD10Q8WYQ3 142 aaPredicted RBP1.76□□□□□ -2.13
CHD4-209ENST00000542717 AQP10Q96PS8 301 aa1.76□□□□□ -2.13
CHD4-209ENST00000542717 CAMK2N2Q96S95 79 aa1.76□□□□□ -2.13
CHD4-209ENST00000542717 NDFIP1Q9BT67 221 aa1.76□□□□□ -2.13
CHD4-209ENST00000542717 NMES1Q9C002 83 aa1.76□□□□□ -2.13
CHD4-209ENST00000542717 CTDSP1Q9GZU7 261 aa1.76□□□□□ -2.13
CHD4-209ENST00000542717 C11orf1Q9H5F2 150 aa1.76□□□□□ -2.13
CHD4-209ENST00000542717 OTORQ9NRC9 128 aa1.76□□□□□ -2.13
CHD4-209ENST00000542717 LYRM2Q9NU23 88 aaPredicted RBP1.76□□□□□ -2.13
CHD4-209ENST00000542717 IL36BQ9NZH7 164 aa1.76□□□□□ -2.13
CHD4-209ENST00000542717 OR5AC2Q9NZP5 309 aa1.76□□□□□ -2.13
CHD4-209ENST00000542717 LSM5Q9Y4Y9 91 aaKnown RBP1.76□□□□□ -2.13
CHD4-209ENST00000542717 IGLV4-69A0A075B6H9 119 aa1.75□□□□□ -2.13
CHD4-209ENST00000542717 IGHV1-24A0A0C4DH33 117 aa1.75□□□□□ -2.13
CHD4-209ENST00000542717 SERTM2A0A1B0GWG4 89 aa1.75□□□□□ -2.13
CHD4-209ENST00000542717 IGSF23A1L1A6 192 aa1.75□□□□□ -2.13
CHD4-209ENST00000542717 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.75□□□□□ -2.13
CHD4-209ENST00000542717 NUPR1O60356 82 aa1.75□□□□□ -2.13
CHD4-209ENST00000542717 ATP6V1G2O95670 118 aa1.75□□□□□ -2.13
CHD4-209ENST00000542717 MT1FP04733 61 aa1.75□□□□□ -2.13
CHD4-209ENST00000542717 PVALBP20472 110 aaPredicted RBP1.75□□□□□ -2.13
CHD4-209ENST00000542717 CAMPP49913 170 aa1.75□□□□□ -2.13
CHD4-209ENST00000542717 TAS2R45P59539 299 aa1.75□□□□□ -2.13
CHD4-209ENST00000542717 MEF2BQ02080 365 aaPredicted RBP1.75□□□□□ -2.13
CHD4-209ENST00000542717 FAM229BQ4G0N7 80 aa1.75□□□□□ -2.13
CHD4-209ENST00000542717 SMUG1Q53HV7 270 aa1.75□□□□□ -2.13
CHD4-209ENST00000542717 PYDC2Q56P42 97 aa1.75□□□□□ -2.13
CHD4-209ENST00000542717 KHDC3LQ587J8 217 aa1.75□□□□□ -2.13
CHD4-209ENST00000542717 NTM-AS1Q6ZSK4 140 aa1.75□□□□□ -2.13
CHD4-209ENST00000542717 NEXN-AS1Q8NBZ9 246 aa1.75□□□□□ -2.13
CHD4-209ENST00000542717 OR11H4Q8NGC9 324 aa1.75□□□□□ -2.13
CHD4-209ENST00000542717 THAP6Q8TBB0 222 aa1.75□□□□□ -2.13
CHD4-209ENST00000542717 SFRP2Q96HF1 295 aa1.75□□□□□ -2.13
CHD4-209ENST00000542717 SGK494Q96LW2 274 aa1.75□□□□□ -2.13
CHD4-209ENST00000542717 MRPS26Q9BYN8 205 aaKnown RBP1.75□□□□□ -2.13
CHD4-209ENST00000542717 KCNIP2Q9NS61 270 aa1.75□□□□□ -2.13
CHD4-209ENST00000542717 MBD2Q9UBB5 411 aa1.75□□□□□ -2.13
CHD4-209ENST00000542717 FLVCR2Q9UPI3 526 aa1.75□□□□□ -2.13
CHD4-209ENST00000542717 TRBV6-1A0A0K0K1D8 114 aa1.74□□□□□ -2.13
CHD4-209ENST00000542717 A0A1B0GUV1 79 aa1.74□□□□□ -2.13
CHD4-209ENST00000542717 C19orf71A6NCJ1 209 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms