RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 IGKV1OR2-108A0A075B7D4 117 aa2.43□□□□□ -2.02
SNHG1-217ENST00000541578 TRGV10A0A0A0MS01 117 aa2.43□□□□□ -2.02
SNHG1-217ENST00000541578 TRAV5A0A0B4J249 113 aa2.43□□□□□ -2.02
SNHG1-217ENST00000541578 LOC102725191A0A1B0GVB3 256 aa2.43□□□□□ -2.02
SNHG1-217ENST00000541578 C4orf51C9J302 202 aa2.43□□□□□ -2.02
SNHG1-217ENST00000541578 H3BRM9 83 aa2.43□□□□□ -2.02
SNHG1-217ENST00000541578 CCDC179H3BU77 68 aa2.43□□□□□ -2.02
SNHG1-217ENST00000541578 GEMIN2O14893 280 aaKnown RBP2.43□□□□□ -2.02
SNHG1-217ENST00000541578 NDUFC2O95298 119 aa2.43□□□□□ -2.02
SNHG1-217ENST00000541578 IGHMP01871 453 aa2.43□□□□□ -2.02
SNHG1-217ENST00000541578 LINC00694P0DN24 101 aa2.43□□□□□ -2.02
SNHG1-217ENST00000541578 IFITM1P13164 125 aa2.43□□□□□ -2.02
SNHG1-217ENST00000541578 KRTAP10-1P60331 282 aa2.43□□□□□ -2.02
SNHG1-217ENST00000541578 Q0VG73 95 aa2.43□□□□□ -2.02
SNHG1-217ENST00000541578 MOBPQ13875 183 aa2.43□□□□□ -2.02
SNHG1-217ENST00000541578 LY6EQ16553 131 aa2.43□□□□□ -2.02
SNHG1-217ENST00000541578 Q6AWC8 147 aa2.43□□□□□ -2.02
SNHG1-217ENST00000541578 TMEM91Q6ZNR0 172 aa2.43□□□□□ -2.02
SNHG1-217ENST00000541578 Q6ZUT4 128 aa2.43□□□□□ -2.02
SNHG1-217ENST00000541578 C1orf64Q8NEQ6 169 aa2.43□□□□□ -2.02
SNHG1-217ENST00000541578 OR11H6Q8NGC7 330 aa2.43□□□□□ -2.02
SNHG1-217ENST00000541578 OR4C16Q8NGL9 310 aa2.43□□□□□ -2.02
SNHG1-217ENST00000541578 VSTM2AQ8TAG5 236 aa2.43□□□□□ -2.02
SNHG1-217ENST00000541578 STAG3L4Q8TBR4 150 aa2.43□□□□□ -2.02
SNHG1-217ENST00000541578 B9D2Q9BPU9 175 aa2.43□□□□□ -2.02
SNHG1-217ENST00000541578 GNB1LQ9BYB4 327 aa2.43□□□□□ -2.02
SNHG1-217ENST00000541578 BPESC1Q9GZL8 116 aa2.43□□□□□ -2.02
SNHG1-217ENST00000541578 CHST6Q9GZX3 395 aa2.43□□□□□ -2.02
SNHG1-217ENST00000541578 OR5V1Q9UGF6 321 aa2.43□□□□□ -2.02
SNHG1-217ENST00000541578 RABAC1Q9UI14 185 aa2.43□□□□□ -2.02
SNHG1-217ENST00000541578 AK3Q9UIJ7 227 aa2.43□□□□□ -2.02
SNHG1-217ENST00000541578 MED31Q9Y3C7 131 aa2.43□□□□□ -2.02
SNHG1-217ENST00000541578 LINC00312Q9Y6C7 94 aa2.43□□□□□ -2.02
SNHG1-217ENST00000541578 CLPSL1A2RUU4 121 aa2.42□□□□□ -2.02
SNHG1-217ENST00000541578 A8MT66 165 aa2.42□□□□□ -2.02
SNHG1-217ENST00000541578 GGTLC3B5MD39 225 aa2.42□□□□□ -2.02
SNHG1-217ENST00000541578 C3orf84H3BNL1 204 aa2.42□□□□□ -2.02
SNHG1-217ENST00000541578 GABARAPH6UMI1 98 aa2.42□□□□□ -2.02
SNHG1-217ENST00000541578 UBE2L6O14933 153 aa2.42□□□□□ -2.02
SNHG1-217ENST00000541578 FSTL3O95633 263 aa2.42□□□□□ -2.02
SNHG1-217ENST00000541578 NCR2O95944 276 aa2.42□□□□□ -2.02
SNHG1-217ENST00000541578 CD7P09564 240 aa2.42□□□□□ -2.02
SNHG1-217ENST00000541578 CGB3P0DN86 165 aa2.42□□□□□ -2.02
SNHG1-217ENST00000541578 CGB7P0DN87 165 aa2.42□□□□□ -2.02
SNHG1-217ENST00000541578 CTLA4P16410 223 aa2.42□□□□□ -2.02
SNHG1-217ENST00000541578 REG1BP48304 166 aa2.42□□□□□ -2.02
SNHG1-217ENST00000541578 BVES-AS1Q5T3Y7 98 aa2.42□□□□□ -2.02
SNHG1-217ENST00000541578 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
SNHG1-217ENST00000541578 LCE1BQ5T7P3 118 aa2.42□□□□□ -2.02
SNHG1-217ENST00000541578 TMEM136Q6ZRR5 245 aa2.42□□□□□ -2.02
SNHG1-217ENST00000541578 OR10P1Q8NGE3 313 aa2.42□□□□□ -2.02
SNHG1-217ENST00000541578 TVP23CQ96ET8 276 aa2.42□□□□□ -2.02
SNHG1-217ENST00000541578 ADAT3Q96EY9 351 aaPredicted RBP2.42□□□□□ -2.02
SNHG1-217ENST00000541578 PMCHL2Q9BQD1 86 aa2.42□□□□□ -2.02
SNHG1-217ENST00000541578 PBOV1Q9GZY1 135 aa2.42□□□□□ -2.02
SNHG1-217ENST00000541578 TMEM191AQ9H0A3 160 aa2.42□□□□□ -2.02
SNHG1-217ENST00000541578 MPC1Q9Y5U8 109 aa2.42□□□□□ -2.02
SNHG1-217ENST00000541578 TENM3Q9P273 2699 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 COL7A1Q02388 2944 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 TRBV6-7A0A0A0MS04 114 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 TMED7-TICAM2A0A0A6YYA0 188 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 IGKV1-12A0A0C4DH73 117 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 TRDV1A0A1B0GX56 115 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 ARRDC5A6NEK1 342 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 C17orf112F2Z3M2 114 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 GNGT2O14610 69 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 MRPL33O75394 65 aaKnown RBP2.41□□□□□ -2.02
SNHG1-217ENST00000541578 LYZL6O75951 148 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 DPM2O94777 84 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 IGKV1D-12P01611 117 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 GYPAP02724 150 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 LGALS1P09382 135 aaKnown RBP2.41□□□□□ -2.02
SNHG1-217ENST00000541578 IGLC6P0CF74 106 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 FABP2P12104 132 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 SLC25A6P12236 298 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 CPMP14384 443 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 RBM11P57052 281 aaKnown RBP2.41□□□□□ -2.02
SNHG1-217ENST00000541578 IL15RAQ13261 267 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 HES1Q14469 280 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 ZNF141Q15928 474 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 LCN15Q6UWW0 184 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 AMTNQ6UX39 209 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 DPPA3Q6W0C5 159 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 C10orf111Q8N326 155 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 LINC00471Q8N535 108 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 OR5D14Q8NGL3 314 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 OR10AG1Q8NH19 301 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 CMTM2Q8TAZ6 248 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 GNPNAT1Q96EK6 184 aaPredicted RBP2.41□□□□□ -2.02
SNHG1-217ENST00000541578 S100A16Q96FQ6 103 aaKnown RBP2.41□□□□□ -2.02
SNHG1-217ENST00000541578 SLC25A44Q96H78 314 aaPredicted RBP2.41□□□□□ -2.02
SNHG1-217ENST00000541578 TMEM222Q9H0R3 208 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 RNASE7Q9H1E1 156 aaKnown RBP2.41□□□□□ -2.02
SNHG1-217ENST00000541578 DYNLRB1Q9NP97 96 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 LAMTOR3Q9UHA4 124 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 PKIGQ9Y2B9 76 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 SPCS1Q9Y6A9 102 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 CMYA5Q8N3K9 4069 aa2.41□□□□□ -2.02
SNHG1-217ENST00000541578 ARHGAP32A7KAX9 2087 aa2.4□□□□□ -2.02
SNHG1-217ENST00000541578 IGLV3-32A0A0A0MS00 114 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms