RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 CRYGDP07320 174 aa4.74□□□□□ -1.65
CLTCL1-206ENST00000540896 SRIP30626 198 aa4.74□□□□□ -1.65
CLTCL1-206ENST00000540896 DAD1P61803 113 aa4.74□□□□□ -1.65
CLTCL1-206ENST00000540896 ORMDL3Q8N138 153 aa4.74□□□□□ -1.65
CLTCL1-206ENST00000540896 IL17DQ8TAD2 202 aa4.74□□□□□ -1.65
CLTCL1-206ENST00000540896 RNF185Q96GF1 192 aa4.74□□□□□ -1.65
CLTCL1-206ENST00000540896 PRELID3AQ96N28 172 aa4.74□□□□□ -1.65
CLTCL1-206ENST00000540896 TRAV26-2A0A0B4J265 109 aa4.73□□□□□ -1.65
CLTCL1-206ENST00000540896 TRAV4A0A0B4J268 109 aa4.73□□□□□ -1.65
CLTCL1-206ENST00000540896 TRGV4A0A0C4DH28 118 aa4.73□□□□□ -1.65
CLTCL1-206ENST00000540896 TEX48A0A1B0GUV7 120 aa4.73□□□□□ -1.65
CLTCL1-206ENST00000540896 H7C1H1 209 aa4.73□□□□□ -1.65
CLTCL1-206ENST00000540896 S100A6P06703 90 aa4.73□□□□□ -1.65
CLTCL1-206ENST00000540896 NHLRC4P0CG21 123 aaPredicted RBP4.73□□□□□ -1.65
CLTCL1-206ENST00000540896 NDUFA6P56556 154 aa4.73□□□□□ -1.65
CLTCL1-206ENST00000540896 ZFP2Q6ZN57 461 aa4.73□□□□□ -1.65
CLTCL1-206ENST00000540896 BAGE3Q86Y29 109 aa4.73□□□□□ -1.65
CLTCL1-206ENST00000540896 MRAP2Q96G30 205 aa4.73□□□□□ -1.65
CLTCL1-206ENST00000540896 ZNF479Q96JC4 524 aa4.73□□□□□ -1.65
CLTCL1-206ENST00000540896 TM2D3Q9BRN9 247 aa4.73□□□□□ -1.65
CLTCL1-206ENST00000540896 ALKBH7Q9BT30 221 aaPredicted RBP4.73□□□□□ -1.65
CLTCL1-206ENST00000540896 DKK2Q9UBU2 259 aa4.73□□□□□ -1.65
CLTCL1-206ENST00000540896 KIF25-AS1Q9Y6Z4 181 aa4.73□□□□□ -1.65
CLTCL1-206ENST00000540896 A0A0J9YWU9 116 aa4.72□□□□□ -1.65
CLTCL1-206ENST00000540896 LOC389332A0A1B0GUA5 103 aa4.72□□□□□ -1.65
CLTCL1-206ENST00000540896 CIDEAO60543 219 aa4.72□□□□□ -1.65
CLTCL1-206ENST00000540896 HIST1H2BKO60814 126 aa4.72□□□□□ -1.65
CLTCL1-206ENST00000540896 TNFRSF6BO95407 300 aa4.72□□□□□ -1.65
CLTCL1-206ENST00000540896 PPP1R17O96001 155 aa4.72□□□□□ -1.65
CLTCL1-206ENST00000540896 HIST1H2BJP06899 126 aa4.72□□□□□ -1.65
CLTCL1-206ENST00000540896 HTN3P15516 51 aa4.72□□□□□ -1.65
CLTCL1-206ENST00000540896 HIST1H2BOP23527 126 aa4.72□□□□□ -1.65
CLTCL1-206ENST00000540896 HIST1H2BBP33778 126 aa4.72□□□□□ -1.65
CLTCL1-206ENST00000540896 HIST1H2BDP58876 126 aa4.72□□□□□ -1.65
CLTCL1-206ENST00000540896 LINC00315P59091 139 aa4.72□□□□□ -1.65
CLTCL1-206ENST00000540896 HIST1H2BCP62807 126 aa4.72□□□□□ -1.65
CLTCL1-206ENST00000540896 FHL2Q14192 279 aa4.72□□□□□ -1.65
CLTCL1-206ENST00000540896 HIST2H2BEQ16778 126 aa4.72□□□□□ -1.65
CLTCL1-206ENST00000540896 OR10J3Q5JRS4 329 aa4.72□□□□□ -1.65
CLTCL1-206ENST00000540896 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.72□□□□□ -1.65
CLTCL1-206ENST00000540896 SUMO4Q6EEV6 95 aa4.72□□□□□ -1.65
CLTCL1-206ENST00000540896 PRSS3P2Q8NHM4 247 aa4.72□□□□□ -1.65
CLTCL1-206ENST00000540896 HIST1H2BHQ93079 126 aa4.72□□□□□ -1.65
CLTCL1-206ENST00000540896 HIST1H2BNQ99877 126 aa4.72□□□□□ -1.65
CLTCL1-206ENST00000540896 HIST1H2BMQ99879 126 aa4.72□□□□□ -1.65
CLTCL1-206ENST00000540896 U3KQK5 164 aa4.72□□□□□ -1.65
CLTCL1-206ENST00000540896 COL7A1Q02388 2944 aa4.72□□□□□ -1.65
CLTCL1-206ENST00000540896 F5H768 121 aa4.71□□□□□ -1.66
CLTCL1-206ENST00000540896 PHOX2AO14813 284 aa4.71□□□□□ -1.66
CLTCL1-206ENST00000540896 GAS8-AS1O95177 125 aa4.71□□□□□ -1.66
CLTCL1-206ENST00000540896 ATP5G1P05496 136 aa4.71□□□□□ -1.66
CLTCL1-206ENST00000540896 GATA1P15976 413 aaPredicted RBP4.71□□□□□ -1.66
CLTCL1-206ENST00000540896 Q6ZSN1 163 aa4.71□□□□□ -1.66
CLTCL1-206ENST00000540896 POM121L12Q8N7R1 296 aa4.71□□□□□ -1.66
CLTCL1-206ENST00000540896 C11orf45Q8TAV5 145 aa4.71□□□□□ -1.66
CLTCL1-206ENST00000540896 RPL39LQ96EH5 51 aaKnown RBP4.71□□□□□ -1.66
CLTCL1-206ENST00000540896 C11orf68Q9H3H3 251 aaKnown RBP4.71□□□□□ -1.66
CLTCL1-206ENST00000540896 MAP1LC3AQ9H492 121 aa4.71□□□□□ -1.66
CLTCL1-206ENST00000540896 ST20Q9HBF5 79 aa4.71□□□□□ -1.66
CLTCL1-206ENST00000540896 CELA1Q9UNI1 258 aa4.71□□□□□ -1.66
CLTCL1-206ENST00000540896 LAMTOR2Q9Y2Q5 125 aa4.71□□□□□ -1.66
CLTCL1-206ENST00000540896 TNFRSF18Q9Y5U5 241 aa4.71□□□□□ -1.66
CLTCL1-206ENST00000540896 TENM3Q9P273 2699 aa4.71□□□□□ -1.66
CLTCL1-206ENST00000540896 DNAH9Q9NYC9 4486 aa4.7□□□□□ -1.66
CLTCL1-206ENST00000540896 M0QY20 66 aa4.7□□□□□ -1.66
CLTCL1-206ENST00000540896 NPYP01303 97 aa4.7□□□□□ -1.66
CLTCL1-206ENST00000540896 PMCHP20382 165 aa4.7□□□□□ -1.66
CLTCL1-206ENST00000540896 Q0VG73 95 aa4.7□□□□□ -1.66
CLTCL1-206ENST00000540896 IQCJQ1A5X6 159 aa4.7□□□□□ -1.66
CLTCL1-206ENST00000540896 UFSP1Q6NVU6 142 aa4.7□□□□□ -1.66
CLTCL1-206ENST00000540896 RNASEKQ6P5S7 137 aaKnown RBP4.7□□□□□ -1.66
CLTCL1-206ENST00000540896 FA2HQ7L5A8 372 aa4.7□□□□□ -1.66
CLTCL1-206ENST00000540896 LINC00612Q8N6U2 182 aa4.7□□□□□ -1.66
CLTCL1-206ENST00000540896 C18orf32Q8TCD1 76 aa4.7□□□□□ -1.66
CLTCL1-206ENST00000540896 C18orf15Q96N68 181 aa4.7□□□□□ -1.66
CLTCL1-206ENST00000540896 C20orf78Q9BR46 151 aa4.7□□□□□ -1.66
CLTCL1-206ENST00000540896 PRADC1Q9BSG0 188 aa4.7□□□□□ -1.66
CLTCL1-206ENST00000540896 NIT2Q9NQR4 276 aa4.7□□□□□ -1.66
CLTCL1-206ENST00000540896 HHLA3Q9XRX5 114 aa4.7□□□□□ -1.66
CLTCL1-206ENST00000540896 MUC4Q99102 2169 aa4.7□□□□□ -1.66
CLTCL1-206ENST00000540896 TRBV6-4A0A1B0GX49 114 aa4.69□□□□□ -1.66
CLTCL1-206ENST00000540896 K7EQD1 137 aa4.69□□□□□ -1.66
CLTCL1-206ENST00000540896 VCYO14598 125 aa4.69□□□□□ -1.66
CLTCL1-206ENST00000540896 P0DMU3 169 aa4.69□□□□□ -1.66
CLTCL1-206ENST00000540896 FAM231AP0DMU4 169 aa4.69□□□□□ -1.66
CLTCL1-206ENST00000540896 FAM231CP0DMU5 169 aa4.69□□□□□ -1.66
CLTCL1-206ENST00000540896 S100A2P29034 98 aa4.69□□□□□ -1.66
CLTCL1-206ENST00000540896 IFI27P40305 119 aaPredicted RBP4.69□□□□□ -1.66
CLTCL1-206ENST00000540896 NANOS2P60321 138 aaKnown RBP4.69□□□□□ -1.66
CLTCL1-206ENST00000540896 SUMO2P61956 95 aaKnown RBP4.69□□□□□ -1.66
CLTCL1-206ENST00000540896 SNRPEP62304 92 aaKnown RBP4.69□□□□□ -1.66
CLTCL1-206ENST00000540896 RPL36AP83881 106 aaKnown RBP4.69□□□□□ -1.66
CLTCL1-206ENST00000540896 RHOHQ15669 191 aa4.69□□□□□ -1.66
CLTCL1-206ENST00000540896 C12orf74Q32Q52 190 aa4.69□□□□□ -1.66
CLTCL1-206ENST00000540896 NIT1Q86X76 327 aa4.69□□□□□ -1.66
CLTCL1-206ENST00000540896 SLC25A29Q8N8R3 303 aa4.69□□□□□ -1.66
CLTCL1-206ENST00000540896 NRACQ8N912 160 aa4.69□□□□□ -1.66
CLTCL1-206ENST00000540896 RPL36ALQ969Q0 106 aaKnown RBP4.69□□□□□ -1.66
CLTCL1-206ENST00000540896 DNAJC30Q96LL9 226 aa4.69□□□□□ -1.66
CLTCL1-206ENST00000540896 STAB2Q8WWQ8 2551 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms