RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 HIST1H2BHQ93079 126 aa7.56□□□□□ -1.2
LEMD3-202ENST00000539442 ZNF479Q96JC4 524 aa7.56□□□□□ -1.2
LEMD3-202ENST00000539442 HIST1H2BNQ99877 126 aa7.56□□□□□ -1.2
LEMD3-202ENST00000539442 HIST1H2BMQ99879 126 aa7.56□□□□□ -1.2
LEMD3-202ENST00000539442 CELA1Q9UNI1 258 aa7.56□□□□□ -1.2
LEMD3-202ENST00000539442 NBEAL2Q6ZNJ1 2754 aa7.55□□□□□ -1.2
LEMD3-202ENST00000539442 IGHV3-73A0A0B4J1V6 119 aa7.55□□□□□ -1.2
LEMD3-202ENST00000539442 TRAV26-2A0A0B4J265 109 aa7.55□□□□□ -1.2
LEMD3-202ENST00000539442 A0A0J9YWU9 116 aa7.55□□□□□ -1.2
LEMD3-202ENST00000539442 M0QY20 66 aa7.55□□□□□ -1.2
LEMD3-202ENST00000539442 NCR2O95944 276 aa7.55□□□□□ -1.2
LEMD3-202ENST00000539442 OR10J3Q5JRS4 329 aa7.55□□□□□ -1.2
LEMD3-202ENST00000539442 TRGV4A0A0C4DH28 118 aa7.54□□□□□ -1.2
LEMD3-202ENST00000539442 TRBV6-5A0A0K0K1A5 114 aa7.54□□□□□ -1.2
LEMD3-202ENST00000539442 TRBV6-4A0A1B0GX49 114 aa7.54□□□□□ -1.2
LEMD3-202ENST00000539442 SMKR1H3BMG3 65 aa7.54□□□□□ -1.2
LEMD3-202ENST00000539442 TNFRSF6BO95407 300 aa7.54□□□□□ -1.2
LEMD3-202ENST00000539442 NPYP01303 97 aa7.54□□□□□ -1.2
LEMD3-202ENST00000539442 ATP5G1P05496 136 aa7.54□□□□□ -1.2
LEMD3-202ENST00000539442 GATA1P15976 413 aaPredicted RBP7.54□□□□□ -1.2
LEMD3-202ENST00000539442 Q0VG73 95 aa7.54□□□□□ -1.2
LEMD3-202ENST00000539442 NRACQ8N912 160 aa7.54□□□□□ -1.2
LEMD3-202ENST00000539442 C18orf32Q8TCD1 76 aa7.54□□□□□ -1.2
LEMD3-202ENST00000539442 TRBV10-1A0A0K0K1A3 114 aa7.53□□□□□ -1.2
LEMD3-202ENST00000539442 PRSS47A8MTI9 375 aa7.53□□□□□ -1.2
LEMD3-202ENST00000539442 K7EQD1 137 aa7.53□□□□□ -1.2
LEMD3-202ENST00000539442 GAS8-AS1O95177 125 aa7.53□□□□□ -1.2
LEMD3-202ENST00000539442 FHL2Q14192 279 aa7.53□□□□□ -1.2
LEMD3-202ENST00000539442 C20orf78Q9BR46 151 aa7.53□□□□□ -1.2
LEMD3-202ENST00000539442 MAP1LC3AQ9H492 121 aa7.53□□□□□ -1.2
LEMD3-202ENST00000539442 NIT2Q9NQR4 276 aa7.53□□□□□ -1.2
LEMD3-202ENST00000539442 SUMO2P61956 95 aaKnown RBP7.52□□□□□ -1.21
LEMD3-202ENST00000539442 RPL32P62910 135 aaKnown RBP7.52□□□□□ -1.21
LEMD3-202ENST00000539442 RHOHQ15669 191 aa7.52□□□□□ -1.21
LEMD3-202ENST00000539442 C12orf74Q32Q52 190 aa7.52□□□□□ -1.21
LEMD3-202ENST00000539442 COA6Q5JTJ3 125 aaKnown RBP7.52□□□□□ -1.21
LEMD3-202ENST00000539442 Q6ZSN1 163 aa7.52□□□□□ -1.21
LEMD3-202ENST00000539442 C11orf45Q8TAV5 145 aa7.52□□□□□ -1.21
LEMD3-202ENST00000539442 RPL39LQ96EH5 51 aaKnown RBP7.52□□□□□ -1.21
LEMD3-202ENST00000539442 DNAJC30Q96LL9 226 aa7.52□□□□□ -1.21
LEMD3-202ENST00000539442 TMA7Q9Y2S6 64 aaKnown RBP7.52□□□□□ -1.21
LEMD3-202ENST00000539442 S100A6P06703 90 aa7.51□□□□□ -1.21
LEMD3-202ENST00000539442 IQCJQ1A5X6 159 aa7.51□□□□□ -1.21
LEMD3-202ENST00000539442 BAGE3Q86Y29 109 aa7.51□□□□□ -1.21
LEMD3-202ENST00000539442 SLC25A29Q8N8R3 303 aa7.51□□□□□ -1.21
LEMD3-202ENST00000539442 PRADC1Q9BSG0 188 aa7.51□□□□□ -1.21
LEMD3-202ENST00000539442 SMIM2Q9BVW6 85 aa7.51□□□□□ -1.21
LEMD3-202ENST00000539442 KRTAP9-8Q9BYQ0 159 aa7.51□□□□□ -1.21
LEMD3-202ENST00000539442 ST20Q9HBF5 79 aa7.51□□□□□ -1.21
LEMD3-202ENST00000539442 NXT2Q9NPJ8 142 aaKnown RBP7.51□□□□□ -1.21
LEMD3-202ENST00000539442 PRO0255Q9UI72 69 aa7.51□□□□□ -1.21
LEMD3-202ENST00000539442 HHLA3Q9XRX5 114 aa7.51□□□□□ -1.21
LEMD3-202ENST00000539442 NACAE9PAV3 2078 aa7.51□□□□□ -1.21
LEMD3-202ENST00000539442 PMCHP20382 165 aa7.5□□□□□ -1.21
LEMD3-202ENST00000539442 HOXA5P20719 270 aa7.5□□□□□ -1.21
LEMD3-202ENST00000539442 CRYBA4P53673 196 aa7.5□□□□□ -1.21
LEMD3-202ENST00000539442 NDUFA6P56556 154 aa7.5□□□□□ -1.21
LEMD3-202ENST00000539442 RPL36AP83881 106 aaKnown RBP7.5□□□□□ -1.21
LEMD3-202ENST00000539442 NEXN-AS1Q8NBZ9 246 aa7.5□□□□□ -1.21
LEMD3-202ENST00000539442 PRSS3P2Q8NHM4 247 aa7.5□□□□□ -1.21
LEMD3-202ENST00000539442 RPL36ALQ969Q0 106 aaKnown RBP7.5□□□□□ -1.21
LEMD3-202ENST00000539442 TNFRSF18Q9Y5U5 241 aa7.5□□□□□ -1.21
LEMD3-202ENST00000539442 TRBV7-3A0A075B6L6 115 aa7.49□□□□□ -1.21
LEMD3-202ENST00000539442 TRBV27A0A0K0K1C4 114 aa7.49□□□□□ -1.21
LEMD3-202ENST00000539442 SDHAF1A6NFY7 115 aa7.49□□□□□ -1.21
LEMD3-202ENST00000539442 F5H768 121 aa7.49□□□□□ -1.21
LEMD3-202ENST00000539442 K7EMI3 77 aa7.49□□□□□ -1.21
LEMD3-202ENST00000539442 P0DMU3 169 aa7.49□□□□□ -1.21
LEMD3-202ENST00000539442 FAM231AP0DMU4 169 aa7.49□□□□□ -1.21
LEMD3-202ENST00000539442 FAM231CP0DMU5 169 aa7.49□□□□□ -1.21
LEMD3-202ENST00000539442 POLR2KP53803 58 aaKnown RBP7.49□□□□□ -1.21
LEMD3-202ENST00000539442 Q6ZTC4 211 aa7.49□□□□□ -1.21
LEMD3-202ENST00000539442 FA2HQ7L5A8 372 aa7.49□□□□□ -1.21
LEMD3-202ENST00000539442 Q8N8P6 123 aa7.49□□□□□ -1.21
LEMD3-202ENST00000539442 CHCHD1Q96BP2 118 aaKnown RBP7.49□□□□□ -1.21
LEMD3-202ENST00000539442 TMEM70Q9BUB7 260 aa7.49□□□□□ -1.21
LEMD3-202ENST00000539442 MEGF8Q7Z7M0 2845 aa7.49□□□□□ -1.21
LEMD3-202ENST00000539442 HUWE1Q7Z6Z7 4374 aaKnown RBP7.49□□□□□ -1.21
LEMD3-202ENST00000539442 DNAH9Q9NYC9 4486 aa7.48□□□□□ -1.21
LEMD3-202ENST00000539442 TENM3Q9P273 2699 aa7.48□□□□□ -1.21
LEMD3-202ENST00000539442 IGLV2-18A0A075B6J9 118 aa7.48□□□□□ -1.21
LEMD3-202ENST00000539442 LOC389332A0A1B0GUA5 103 aa7.48□□□□□ -1.21
LEMD3-202ENST00000539442 LINC01546A6NGU7 62 aa7.48□□□□□ -1.21
LEMD3-202ENST00000539442 VCYO14598 125 aa7.48□□□□□ -1.21
LEMD3-202ENST00000539442 TCAPO15273 167 aa7.48□□□□□ -1.21
LEMD3-202ENST00000539442 SERF1AO75920 110 aa7.48□□□□□ -1.21
LEMD3-202ENST00000539442 LINC00614P0C842 121 aa7.48□□□□□ -1.21
LEMD3-202ENST00000539442 ESDP10768 282 aa7.48□□□□□ -1.21
LEMD3-202ENST00000539442 IFI27P40305 119 aaPredicted RBP7.48□□□□□ -1.21
LEMD3-202ENST00000539442 NANOS2P60321 138 aaKnown RBP7.48□□□□□ -1.21
LEMD3-202ENST00000539442 NIT1Q86X76 327 aa7.48□□□□□ -1.21
LEMD3-202ENST00000539442 KIR2DL4Q99706 377 aa7.48□□□□□ -1.21
LEMD3-202ENST00000539442 AP5S1Q9NUS5 200 aa7.48□□□□□ -1.21
LEMD3-202ENST00000539442 TRAV10A0A0B4J240 114 aa7.47□□□□□ -1.21
LEMD3-202ENST00000539442 H3BNG1 76 aa7.47□□□□□ -1.21
LEMD3-202ENST00000539442 LINC00694P0DN24 101 aa7.47□□□□□ -1.21
LEMD3-202ENST00000539442 HTN3P15516 51 aa7.47□□□□□ -1.21
LEMD3-202ENST00000539442 LINC00310P59036 64 aa7.47□□□□□ -1.21
LEMD3-202ENST00000539442 UBE2D3P61077 147 aa7.47□□□□□ -1.21
LEMD3-202ENST00000539442 UBE2D2P62837 147 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 467.8 ms