RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 HSPB8Q9UJY1 196 aa3.14□□□□□ -1.91
SNHG1-208ENST00000538266 KLF12Q9Y4X4 402 aa3.14□□□□□ -1.91
SNHG1-208ENST00000538266 VWFP04275 2813 aa3.14□□□□□ -1.91
SNHG1-208ENST00000538266 ANK3Q12955 4377 aaKnown RBP3.13□□□□□ -1.91
SNHG1-208ENST00000538266 IGHV3OR16-12A0A075B7B8 117 aa3.13□□□□□ -1.91
SNHG1-208ENST00000538266 TRBV6-1A0A0K0K1D8 114 aa3.13□□□□□ -1.91
SNHG1-208ENST00000538266 FBLL1A6NHQ2 334 aaKnown RBP3.13□□□□□ -1.91
SNHG1-208ENST00000538266 PRAC2D3DTV9 90 aa3.13□□□□□ -1.91
SNHG1-208ENST00000538266 VCYO14598 125 aa3.13□□□□□ -1.91
SNHG1-208ENST00000538266 LEPROTL1O95214 131 aa3.13□□□□□ -1.91
SNHG1-208ENST00000538266 INSP01308 110 aa3.13□□□□□ -1.91
SNHG1-208ENST00000538266 LTAP01374 205 aa3.13□□□□□ -1.91
SNHG1-208ENST00000538266 PPBPP02775 128 aa3.13□□□□□ -1.91
SNHG1-208ENST00000538266 TCRAP04437 139 aa3.13□□□□□ -1.91
SNHG1-208ENST00000538266 CAMPP49913 170 aa3.13□□□□□ -1.91
SNHG1-208ENST00000538266 ZNF138P52744 262 aa3.13□□□□□ -1.91
SNHG1-208ENST00000538266 FXYD7P58549 80 aa3.13□□□□□ -1.91
SNHG1-208ENST00000538266 SEC61BP60468 96 aaKnown RBP3.13□□□□□ -1.91
SNHG1-208ENST00000538266 GNG5P63218 68 aa3.13□□□□□ -1.91
SNHG1-208ENST00000538266 ERCC8Q13216 396 aa3.13□□□□□ -1.91
SNHG1-208ENST00000538266 MAJINQ3KP22 176 aa3.13□□□□□ -1.91
SNHG1-208ENST00000538266 Q6AWC8 147 aa3.13□□□□□ -1.91
SNHG1-208ENST00000538266 SPATA12Q7Z6I5 190 aa3.13□□□□□ -1.91
SNHG1-208ENST00000538266 Q8TAT8 98 aa3.13□□□□□ -1.91
SNHG1-208ENST00000538266 RNASE8Q8TDE3 154 aaKnown RBP3.13□□□□□ -1.91
SNHG1-208ENST00000538266 LINC00477Q96M19 166 aa3.13□□□□□ -1.91
SNHG1-208ENST00000538266 LINC00479Q96M42 142 aa3.13□□□□□ -1.91
SNHG1-208ENST00000538266 ODF3Q96PU9 254 aa3.13□□□□□ -1.91
SNHG1-208ENST00000538266 ASCL2Q99929 193 aa3.13□□□□□ -1.91
SNHG1-208ENST00000538266 VGLL1Q99990 258 aa3.13□□□□□ -1.91
SNHG1-208ENST00000538266 MAP1LC3CQ9BXW4 147 aa3.13□□□□□ -1.91
SNHG1-208ENST00000538266 EPDR1Q9UM22 224 aa3.13□□□□□ -1.91
SNHG1-208ENST00000538266 TP53TG1Q9Y2A0 90 aa3.13□□□□□ -1.91
SNHG1-208ENST00000538266 TRAV12-2A0A075B6T6 113 aa3.12□□□□□ -1.91
SNHG1-208ENST00000538266 TRAV8-1A0A0A6YYK1 113 aa3.12□□□□□ -1.91
SNHG1-208ENST00000538266 TRBV7-9A0A0J9YWB2 115 aa3.12□□□□□ -1.91
SNHG1-208ENST00000538266 C19orf71A6NCJ1 209 aa3.12□□□□□ -1.91
SNHG1-208ENST00000538266 A8MTW9 85 aa3.12□□□□□ -1.91
SNHG1-208ENST00000538266 TAX1BP3O14907 124 aa3.12□□□□□ -1.91
SNHG1-208ENST00000538266 CT45A10P0DMU9 189 aa3.12□□□□□ -1.91
SNHG1-208ENST00000538266 HTN1P15515 57 aa3.12□□□□□ -1.91
SNHG1-208ENST00000538266 RNASE4P34096 147 aaKnown RBP3.12□□□□□ -1.91
SNHG1-208ENST00000538266 SEC11AP67812 179 aa3.12□□□□□ -1.91
SNHG1-208ENST00000538266 RPL36AP83881 106 aaKnown RBP3.12□□□□□ -1.91
SNHG1-208ENST00000538266 RIGQ13278 110 aa3.12□□□□□ -1.91
SNHG1-208ENST00000538266 MPV17L2Q567V2 206 aa3.12□□□□□ -1.91
SNHG1-208ENST00000538266 BVES-AS1Q5T3Y7 98 aa3.12□□□□□ -1.91
SNHG1-208ENST00000538266 AMTNQ6UX39 209 aa3.12□□□□□ -1.91
SNHG1-208ENST00000538266 LINC00322Q6ZN03 302 aaPredicted RBP3.12□□□□□ -1.91
SNHG1-208ENST00000538266 FA2HQ7L5A8 372 aa3.12□□□□□ -1.91
SNHG1-208ENST00000538266 PRNTQ86SH4 94 aa3.12□□□□□ -1.91
SNHG1-208ENST00000538266 TMEM75Q8N9X5 138 aa3.12□□□□□ -1.91
SNHG1-208ENST00000538266 GATD1Q8NB37 220 aa3.12□□□□□ -1.91
SNHG1-208ENST00000538266 OR11H2Q8NH07 326 aa3.12□□□□□ -1.91
SNHG1-208ENST00000538266 PGLYRP4Q96LB8 373 aa3.12□□□□□ -1.91
SNHG1-208ENST00000538266 TM2D3Q9BRN9 247 aa3.12□□□□□ -1.91
SNHG1-208ENST00000538266 AGPAT4-IT1Q9H0P7 198 aa3.12□□□□□ -1.91
SNHG1-208ENST00000538266 RETNQ9HD89 108 aa3.12□□□□□ -1.91
SNHG1-208ENST00000538266 SCRT2Q9NQ03 307 aa3.12□□□□□ -1.91
SNHG1-208ENST00000538266 LENEPQ9Y5L5 61 aa3.12□□□□□ -1.91
SNHG1-208ENST00000538266 NOTCH1P46531 2555 aa3.12□□□□□ -1.91
SNHG1-208ENST00000538266 TRAV12-3A0A0B4J271 114 aa3.11□□□□□ -1.91
SNHG1-208ENST00000538266 MUC21A0A0G2JKD1 596 aa3.11□□□□□ -1.91
SNHG1-208ENST00000538266 MUC21A0A140T8X8 626 aa3.11□□□□□ -1.91
SNHG1-208ENST00000538266 A0A1B0GUT8 65 aa3.11□□□□□ -1.91
SNHG1-208ENST00000538266 C7orf71A4D174 169 aa3.11□□□□□ -1.91
SNHG1-208ENST00000538266 A6NDN8 102 aa3.11□□□□□ -1.91
SNHG1-208ENST00000538266 KLLNB2CW77 178 aa3.11□□□□□ -1.91
SNHG1-208ENST00000538266 K7ERU9 68 aa3.11□□□□□ -1.91
SNHG1-208ENST00000538266 GIG44P09565 113 aaPredicted RBP3.11□□□□□ -1.91
SNHG1-208ENST00000538266 COX8AP10176 69 aa3.11□□□□□ -1.91
SNHG1-208ENST00000538266 FOXA3P55318 350 aaPredicted RBP3.11□□□□□ -1.91
SNHG1-208ENST00000538266 MUC21Q5SSG8 566 aa3.11□□□□□ -1.91
SNHG1-208ENST00000538266 LINC01545Q5VT33 79 aa3.11□□□□□ -1.91
SNHG1-208ENST00000538266 Q6ZVH6 145 aa3.11□□□□□ -1.91
SNHG1-208ENST00000538266 ZFAND2AQ8N6M9 145 aa3.11□□□□□ -1.91
SNHG1-208ENST00000538266 OR10AG1Q8NH19 301 aa3.11□□□□□ -1.91
SNHG1-208ENST00000538266 GTSF1Q8WW33 167 aa3.11□□□□□ -1.91
SNHG1-208ENST00000538266 SGK494Q96LW2 274 aa3.11□□□□□ -1.91
SNHG1-208ENST00000538266 AP1S3Q96PC3 154 aa3.11□□□□□ -1.91
SNHG1-208ENST00000538266 LINC01587Q99440 93 aa3.11□□□□□ -1.91
SNHG1-208ENST00000538266 VPS25Q9BRG1 176 aa3.11□□□□□ -1.91
SNHG1-208ENST00000538266 OVOL2Q9BRP0 275 aa3.11□□□□□ -1.91
SNHG1-208ENST00000538266 KRTAP9-8Q9BYQ0 159 aa3.11□□□□□ -1.91
SNHG1-208ENST00000538266 CST9LQ9H4G1 147 aa3.11□□□□□ -1.91
SNHG1-208ENST00000538266 PSG8Q9UQ74 426 aa3.11□□□□□ -1.91
SNHG1-208ENST00000538266 U3KQK5 164 aa3.11□□□□□ -1.91
SNHG1-208ENST00000538266 AGRNO00468 2067 aa3.11□□□□□ -1.91
SNHG1-208ENST00000538266 PKD1L1Q8TDX9 2849 aa3.11□□□□□ -1.91
SNHG1-208ENST00000538266 A0A1B0GUV1 79 aa3.1□□□□□ -1.91
SNHG1-208ENST00000538266 TMEM189A5PLL7 270 aa3.1□□□□□ -1.91
SNHG1-208ENST00000538266 SMIM9A6NGZ8 99 aa3.1□□□□□ -1.91
SNHG1-208ENST00000538266 KRTAP29-1A8MX34 341 aaPredicted RBP3.1□□□□□ -1.91
SNHG1-208ENST00000538266 IGLV2-11P01706 119 aa3.1□□□□□ -1.91
SNHG1-208ENST00000538266 MIFP14174 115 aa3.1□□□□□ -1.91
SNHG1-208ENST00000538266 HSD52Q0P140 79 aa3.1□□□□□ -1.91
SNHG1-208ENST00000538266 RRN3P1Q2M238 152 aa3.1□□□□□ -1.91
SNHG1-208ENST00000538266 OCIAD2Q56VL3 154 aa3.1□□□□□ -1.91
SNHG1-208ENST00000538266 FAM159AQ6UWV7 190 aa3.1□□□□□ -1.91
SNHG1-208ENST00000538266 LINC00173Q6ZV60 143 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms