RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 RNF152Q8N8N0 203 aa4.11□□□□□ -1.75
PTPRD-213ENST00000537002 TEX22C9J3V5 150 aa4.11□□□□□ -1.75
PTPRD-213ENST00000537002 CFHR3Q02985 330 aa4.11□□□□□ -1.75
PTPRD-213ENST00000537002 BCE1O60756 84 aa4.11□□□□□ -1.75
PTPRD-213ENST00000537002 CRIP1P50238 77 aa4.11□□□□□ -1.75
PTPRD-213ENST00000537002 VSIG2Q96IQ7 327 aa4.11□□□□□ -1.75
PTPRD-213ENST00000537002 ATP5EP56381 51 aaPredicted RBP4.11□□□□□ -1.75
PTPRD-213ENST00000537002 DEFB1P60022 68 aa4.11□□□□□ -1.75
PTPRD-213ENST00000537002 RAI1Q7Z5J4 1906 aaPredicted RBP4.11□□□□□ -1.75
PTPRD-213ENST00000537002 A0A0G2JNJ9 132 aa4.11□□□□□ -1.75
PTPRD-213ENST00000537002 HRCT1Q6UXD1 115 aa4.11□□□□□ -1.75
PTPRD-213ENST00000537002 TMEM61Q8N0U2 210 aa4.11□□□□□ -1.75
PTPRD-213ENST00000537002 Q9UFV3 132 aa4.11□□□□□ -1.75
PTPRD-213ENST00000537002 SAA4P35542 130 aa4.11□□□□□ -1.75
PTPRD-213ENST00000537002 DEFB131AP59861 70 aa4.11□□□□□ -1.75
PTPRD-213ENST00000537002 SERP2Q8N6R1 65 aa4.11□□□□□ -1.75
PTPRD-213ENST00000537002 TMEM263Q8WUH6 116 aaKnown RBP4.11□□□□□ -1.75
PTPRD-213ENST00000537002 FHL3Q13643 280 aa4.1□□□□□ -1.75
PTPRD-213ENST00000537002 TRAV23DV6A0A075B6W5 121 aa4.1□□□□□ -1.75
PTPRD-213ENST00000537002 E7EQL1 145 aa4.1□□□□□ -1.75
PTPRD-213ENST00000537002 F5H768 121 aa4.1□□□□□ -1.75
PTPRD-213ENST00000537002 H3BUX3 64 aa4.1□□□□□ -1.75
PTPRD-213ENST00000537002 LECT2O14960 151 aa4.1□□□□□ -1.75
PTPRD-213ENST00000537002 GAS8-AS1O95177 125 aa4.1□□□□□ -1.75
PTPRD-213ENST00000537002 CTSGP08311 255 aa4.1□□□□□ -1.75
PTPRD-213ENST00000537002 EBI3Q14213 229 aa4.1□□□□□ -1.75
PTPRD-213ENST00000537002 SPRY4Q9C004 299 aa4.1□□□□□ -1.75
PTPRD-213ENST00000537002 FAM236DA0A1B0GTK5 79 aa4.1□□□□□ -1.75
PTPRD-213ENST00000537002 FAM236CP0DP71 79 aa4.1□□□□□ -1.75
PTPRD-213ENST00000537002 CEMP1Q6PRD7 247 aaPredicted RBP4.1□□□□□ -1.75
PTPRD-213ENST00000537002 DSCR8Q96T75 97 aa4.1□□□□□ -1.75
PTPRD-213ENST00000537002 DSCAML1Q8TD84 2053 aa4.1□□□□□ -1.75
PTPRD-213ENST00000537002 APC2O95996 2303 aa4.1□□□□□ -1.75
PTPRD-213ENST00000537002 DAD1P61803 113 aa4.1□□□□□ -1.75
PTPRD-213ENST00000537002 C20orf197Q8N268 126 aa4.1□□□□□ -1.75
PTPRD-213ENST00000537002 IGHV3-30-3P0DP02 117 aa4.1□□□□□ -1.75
PTPRD-213ENST00000537002 Q6ZQT7 251 aa4.1□□□□□ -1.75
PTPRD-213ENST00000537002 USMG5Q96IX5 58 aa4.1□□□□□ -1.75
PTPRD-213ENST00000537002 C9orf47Q6ZRZ4 202 aa4.1□□□□□ -1.75
PTPRD-213ENST00000537002 FAM19A5Q7Z5A7 132 aaPredicted RBP4.1□□□□□ -1.75
PTPRD-213ENST00000537002 WFDC11Q8NEX6 87 aa4.1□□□□□ -1.75
PTPRD-213ENST00000537002 XCL2Q9UBD3 114 aa4.09□□□□□ -1.75
PTPRD-213ENST00000537002 SPTA1P02549 2419 aa4.09□□□□□ -1.75
PTPRD-213ENST00000537002 NDUFA4O00483 81 aa4.09□□□□□ -1.75
PTPRD-213ENST00000537002 DAZ2Q13117 558 aaKnown RBP4.09□□□□□ -1.75
PTPRD-213ENST00000537002 SS18Q15532 418 aa4.09□□□□□ -1.75
PTPRD-213ENST00000537002 DAZ4Q86SG3 579 aaKnown RBP4.09□□□□□ -1.75
PTPRD-213ENST00000537002 MPLKIPQ8TAP9 179 aa4.09□□□□□ -1.75
PTPRD-213ENST00000537002 SND1-IT1Q9HBX3 110 aa4.09□□□□□ -1.75
PTPRD-213ENST00000537002 DAZ3Q9NR90 486 aaKnown RBP4.09□□□□□ -1.75
PTPRD-213ENST00000537002 IGLV11-55A0A075B6I3 123 aa4.09□□□□□ -1.75
PTPRD-213ENST00000537002 TRBV6-5A0A0K0K1A5 114 aa4.09□□□□□ -1.75
PTPRD-213ENST00000537002 PRO0628Q9UI54 55 aa4.09□□□□□ -1.75
PTPRD-213ENST00000537002 MIAQ16674 131 aa4.09□□□□□ -1.75
PTPRD-213ENST00000537002 C11orf44Q8N8P7 122 aa4.09□□□□□ -1.75
PTPRD-213ENST00000537002 NSUN5P1Q3KNT7 163 aa4.09□□□□□ -1.76
PTPRD-213ENST00000537002 IGHV7-4-1A0A0J9YVY3 117 aa4.09□□□□□ -1.76
PTPRD-213ENST00000537002 V9GYY9 64 aa4.09□□□□□ -1.76
PTPRD-213ENST00000537002 POM121L12Q8N7R1 296 aa4.08□□□□□ -1.76
PTPRD-213ENST00000537002 IGHV1-58A0A0C4DH39 117 aa4.08□□□□□ -1.76
PTPRD-213ENST00000537002 Q6ZS46 218 aa4.08□□□□□ -1.76
PTPRD-213ENST00000537002 CRIP2P52943 208 aaPredicted RBP4.08□□□□□ -1.76
PTPRD-213ENST00000537002 TMEM223A0PJW6 202 aa4.08□□□□□ -1.76
PTPRD-213ENST00000537002 RPL35AP18077 110 aaKnown RBP4.08□□□□□ -1.76
PTPRD-213ENST00000537002 SVILO95425 2214 aa4.08□□□□□ -1.76
PTPRD-213ENST00000537002 LOC107984640A0A0U1RRK4 108 aa4.08□□□□□ -1.76
PTPRD-213ENST00000537002 F8WDY8 70 aa4.08□□□□□ -1.76
PTPRD-213ENST00000537002 CRYGDP07320 174 aa4.08□□□□□ -1.76
PTPRD-213ENST00000537002 RPL18AQ02543 176 aaKnown RBP4.08□□□□□ -1.76
PTPRD-213ENST00000537002 KLK5Q9Y337 293 aaPredicted RBP4.08□□□□□ -1.76
PTPRD-213ENST00000537002 COX7A2LO14548 114 aa4.08□□□□□ -1.76
PTPRD-213ENST00000537002 BUB3O43684 328 aa4.08□□□□□ -1.76
PTPRD-213ENST00000537002 ZNF22P17026 224 aaPredicted RBP4.08□□□□□ -1.76
PTPRD-213ENST00000537002 COX7B2Q8TF08 81 aa4.08□□□□□ -1.76
PTPRD-213ENST00000537002 H0YGX0 51 aa4.07□□□□□ -1.76
PTPRD-213ENST00000537002 Q6JHZ5 121 aa4.07□□□□□ -1.76
PTPRD-213ENST00000537002 CLPSL2Q6UWE3 100 aa4.07□□□□□ -1.76
PTPRD-213ENST00000537002 C20orf203Q8NBC4 194 aa4.07□□□□□ -1.76
PTPRD-213ENST00000537002 UPK3BQ9BT76 320 aa4.07□□□□□ -1.76
PTPRD-213ENST00000537002 PYGO1Q9Y3Y4 419 aa4.07□□□□□ -1.76
PTPRD-213ENST00000537002 DEFB130BP0DP73 79 aa4.07□□□□□ -1.76
PTPRD-213ENST00000537002 DEFB130AP0DP74 79 aa4.07□□□□□ -1.76
PTPRD-213ENST00000537002 C5orf38Q86SI9 138 aa4.07□□□□□ -1.76
PTPRD-213ENST00000537002 NPBQ8NG41 125 aa4.07□□□□□ -1.76
PTPRD-213ENST00000537002 BRI3O95415 125 aa4.07□□□□□ -1.76
PTPRD-213ENST00000537002 CADP27708 2225 aa4.07□□□□□ -1.76
PTPRD-213ENST00000537002 TRBV27A0A0K0K1C4 114 aa4.07□□□□□ -1.76
PTPRD-213ENST00000537002 NDUFC1O43677 76 aa4.07□□□□□ -1.76
PTPRD-213ENST00000537002 PLXNB1O43157 2135 aa4.07□□□□□ -1.76
PTPRD-213ENST00000537002 ENHOQ6UWT2 76 aa4.07□□□□□ -1.76
PTPRD-213ENST00000537002 ELANEP08246 267 aa4.07□□□□□ -1.76
PTPRD-213ENST00000537002 NCR3O14931 201 aa4.06□□□□□ -1.76
PTPRD-213ENST00000537002 MSMPQ1L6U9 139 aa4.06□□□□□ -1.76
PTPRD-213ENST00000537002 ZDBF2Q9HCK1 2354 aa4.06□□□□□ -1.76
PTPRD-213ENST00000537002 TRBV10-3A0A0K0K1G6 114 aa4.06□□□□□ -1.76
PTPRD-213ENST00000537002 A8MZ25 164 aa4.06□□□□□ -1.76
PTPRD-213ENST00000537002 H7C423 109 aa4.06□□□□□ -1.76
PTPRD-213ENST00000537002 IGF1P05019 195 aa4.06□□□□□ -1.76
PTPRD-213ENST00000537002 WFDC9Q8NEX5 89 aa4.06□□□□□ -1.76
PTPRD-213ENST00000537002 IGHV7-81A0A0B4J1V7 117 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms