RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 KIF25-AS1Q9Y6Z4 181 aa14.88□□□□□ -0.03
SSPN-204ENST00000535504 IGHV3-30P01768 117 aa14.87□□□□□ -0.03
SSPN-204ENST00000535504 IGHV3-33P01772 117 aa14.87□□□□□ -0.03
SSPN-204ENST00000535504 IGHV3-30-3P0DP02 117 aa14.87□□□□□ -0.03
SSPN-204ENST00000535504 IGHV3-30-5P0DP03 117 aa14.87□□□□□ -0.03
SSPN-204ENST00000535504 SRSF3P84103 164 aaKnown RBP14.87□□□□□ -0.03
SSPN-204ENST00000535504 GTSF1Q8WW33 167 aa14.87□□□□□ -0.03
SSPN-204ENST00000535504 HIGD1CA8MV81 97 aa14.86□□□□□ -0.03
SSPN-204ENST00000535504 EREGO14944 169 aa14.86□□□□□ -0.03
SSPN-204ENST00000535504 PKIAP61925 76 aa14.86□□□□□ -0.03
SSPN-204ENST00000535504 SUMO4Q6EEV6 95 aa14.86□□□□□ -0.03
SSPN-204ENST00000535504 RASL11AQ6T310 242 aa14.86□□□□□ -0.03
SSPN-204ENST00000535504 Q9UF83 564 aa14.86□□□□□ -0.03
SSPN-204ENST00000535504 A0A1B0GUT8 65 aa14.85□□□□□ -0.03
SSPN-204ENST00000535504 C9JQL5 133 aa14.85□□□□□ -0.03
SSPN-204ENST00000535504 FOXA3P55318 350 aaPredicted RBP14.85□□□□□ -0.03
SSPN-204ENST00000535504 CLLU1Q5K131 121 aa14.85□□□□□ -0.03
SSPN-204ENST00000535504 A0A087WX48 190 aa14.84□□□□□ -0.03
SSPN-204ENST00000535504 M0QY20 66 aa14.83□□□□□ -0.04
SSPN-204ENST00000535504 PSCAO43653 123 aa14.83□□□□□ -0.04
SSPN-204ENST00000535504 TNP2Q05952 138 aa14.83□□□□□ -0.04
SSPN-204ENST00000535504 RIGQ13278 110 aa14.83□□□□□ -0.04
SSPN-204ENST00000535504 ELOBQ15370 118 aa14.83□□□□□ -0.04
SSPN-204ENST00000535504 NAT8BQ9UHF3 227 aa14.83□□□□□ -0.04
SSPN-204ENST00000535504 TMEM262E9PQX1 116 aa14.82□□□□□ -0.04
SSPN-204ENST00000535504 FRZBQ92765 325 aa14.82□□□□□ -0.04
SSPN-204ENST00000535504 CHCHD7Q9BUK0 85 aa14.82□□□□□ -0.04
SSPN-204ENST00000535504 NIT2Q9NQR4 276 aa14.82□□□□□ -0.04
SSPN-204ENST00000535504 V9GYV3 84 aa14.82□□□□□ -0.04
SSPN-204ENST00000535504 DNAH10Q8IVF4 4471 aa14.82□□□□□ -0.04
SSPN-204ENST00000535504 TRBV6-8A0A0A6YYG3 113 aa14.81□□□□□ -0.04
SSPN-204ENST00000535504 TRBV25-1A0A075B6N4 114 aa14.8□□□□□ -0.04
SSPN-204ENST00000535504 IBA57-AS1B1ANH7 110 aa14.8□□□□□ -0.04
SSPN-204ENST00000535504 PNRC1Q12796 327 aaPredicted RBP14.8□□□□□ -0.04
SSPN-204ENST00000535504 LAGE3Q14657 143 aa14.8□□□□□ -0.04
SSPN-204ENST00000535504 CHCHD5Q9BSY4 110 aa14.8□□□□□ -0.04
SSPN-204ENST00000535504 TRAV8-3A0A0A6YYJ7 113 aa14.79□□□□□ -0.04
SSPN-204ENST00000535504 A0A1B0GVY2 172 aa14.79□□□□□ -0.04
SSPN-204ENST00000535504 PPP1R2P9O14990 202 aa14.79□□□□□ -0.04
SSPN-204ENST00000535504 TM2D2Q9BX73 214 aa14.79□□□□□ -0.04
SSPN-204ENST00000535504 Q9HAA7 133 aa14.79□□□□□ -0.04
SSPN-204ENST00000535504 NIT1Q86X76 327 aa14.78□□□□□ -0.04
SSPN-204ENST00000535504 RMI2Q96E14 147 aa14.78□□□□□ -0.04
SSPN-204ENST00000535504 NUP35Q8NFH5 326 aa14.77□□□□□ -0.05
SSPN-204ENST00000535504 TMEM191AQ9H0A3 160 aa14.77□□□□□ -0.05
SSPN-204ENST00000535504 IGHV1-24A0A0C4DH33 117 aa14.76□□□□□ -0.05
SSPN-204ENST00000535504 S100A8P05109 93 aa14.76□□□□□ -0.05
SSPN-204ENST00000535504 UQCC3Q6UW78 93 aa14.76□□□□□ -0.05
SSPN-204ENST00000535504 A0A1B0GW15 77 aa14.75□□□□□ -0.05
SSPN-204ENST00000535504 COTL1Q14019 142 aa14.75□□□□□ -0.05
SSPN-204ENST00000535504 COX11Q9Y6N1 276 aa14.75□□□□□ -0.05
SSPN-204ENST00000535504 TRAV26-2A0A0B4J265 109 aa14.74□□□□□ -0.05
SSPN-204ENST00000535504 SMIM27A0A1W2PRY6 76 aa14.74□□□□□ -0.05
SSPN-204ENST00000535504 UBE2L6O14933 153 aa14.74□□□□□ -0.05
SSPN-204ENST00000535504 CRPP02741 224 aa14.74□□□□□ -0.05
SSPN-204ENST00000535504 Q6ZRN7 208 aaPredicted RBP14.74□□□□□ -0.05
SSPN-204ENST00000535504 GATD1Q8NB37 220 aa14.74□□□□□ -0.05
SSPN-204ENST00000535504 MT-ND4LP03901 98 aa14.73□□□□□ -0.05
SSPN-204ENST00000535504 EPPK1P58107 5090 aaKnown RBP14.72□□□□□ -0.05
SSPN-204ENST00000535504 PPP1R17O96001 155 aa14.72□□□□□ -0.05
SSPN-204ENST00000535504 IFITM2Q01629 132 aa14.72□□□□□ -0.05
SSPN-204ENST00000535504 Q0VG73 95 aa14.72□□□□□ -0.05
SSPN-204ENST00000535504 ANAPC16Q96DE5 110 aa14.72□□□□□ -0.05
SSPN-204ENST00000535504 MRAP2Q96G30 205 aa14.72□□□□□ -0.05
SSPN-204ENST00000535504 TMEM243Q9BU79 118 aa14.72□□□□□ -0.05
SSPN-204ENST00000535504 KLK12Q9UKR0 248 aa14.72□□□□□ -0.05
SSPN-204ENST00000535504 FRAS1Q86XX4 4008 aa14.72□□□□□ -0.05
SSPN-204ENST00000535504 C16orf90A8MZG2 172 aa14.71□□□□□ -0.05
SSPN-204ENST00000535504 IQCJQ1A5X6 159 aa14.71□□□□□ -0.05
SSPN-204ENST00000535504 SPATA12Q7Z6I5 190 aa14.71□□□□□ -0.05
SSPN-204ENST00000535504 ANGP03950 147 aaKnown RBP14.7□□□□□ -0.06
SSPN-204ENST00000535504 AMTP48728 403 aa14.7□□□□□ -0.06
SSPN-204ENST00000535504 Q8N3U1 123 aa14.7□□□□□ -0.06
SSPN-204ENST00000535504 UBE2WQ96B02 151 aa14.7□□□□□ -0.06
SSPN-204ENST00000535504 DNAH2Q9P225 4427 aa14.7□□□□□ -0.06
SSPN-204ENST00000535504 F8W036 122 aa14.69□□□□□ -0.06
SSPN-204ENST00000535504 CAMPP49913 170 aa14.69□□□□□ -0.06
SSPN-204ENST00000535504 GAGE6Q13070 117 aa14.69□□□□□ -0.06
SSPN-204ENST00000535504 ST20Q9HBF5 79 aa14.69□□□□□ -0.06
SSPN-204ENST00000535504 NCR2O95944 276 aa14.68□□□□□ -0.06
SSPN-204ENST00000535504 HBBP68871 147 aa14.68□□□□□ -0.06
SSPN-204ENST00000535504 NTM-AS1Q6ZSK4 140 aa14.68□□□□□ -0.06
SSPN-204ENST00000535504 AMN1Q8IY45 258 aa14.68□□□□□ -0.06
SSPN-204ENST00000535504 RPL39LQ96EH5 51 aaKnown RBP14.68□□□□□ -0.06
SSPN-204ENST00000535504 IGKV2D-24A0A075B6R9 120 aa14.67□□□□□ -0.06
SSPN-204ENST00000535504 A0A087WTM6 91 aa14.67□□□□□ -0.06
SSPN-204ENST00000535504 SDHAF1A6NFY7 115 aa14.67□□□□□ -0.06
SSPN-204ENST00000535504 RAB4AP20338 218 aa14.67□□□□□ -0.06
SSPN-204ENST00000535504 PMCHP20382 165 aa14.67□□□□□ -0.06
SSPN-204ENST00000535504 MPV17L2Q567V2 206 aa14.67□□□□□ -0.06
SSPN-204ENST00000535504 APCSP02743 223 aa14.66□□□□□ -0.06
SSPN-204ENST00000535504 MRPL54Q6P161 138 aaKnown RBP14.66□□□□□ -0.06
SSPN-204ENST00000535504 ATRAIDQ6UW56 229 aa14.66□□□□□ -0.06
SSPN-204ENST00000535504 COMMD7Q86VX2 200 aa14.66□□□□□ -0.06
SSPN-204ENST00000535504 PGPEP1Q9NXJ5 209 aa14.66□□□□□ -0.06
SSPN-204ENST00000535504 DNAH17Q9UFH2 4485 aa14.65□□□□□ -0.06
SSPN-204ENST00000535504 I3L3M4 83 aa14.65□□□□□ -0.06
SSPN-204ENST00000535504 ATP5L2Q7Z4Y8 100 aa14.65□□□□□ -0.06
SSPN-204ENST00000535504 C1orf43Q9BWL3 253 aa14.65□□□□□ -0.06
SSPN-204ENST00000535504 TRBV6-5A0A0K0K1A5 114 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms