RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 FXYD6P3P58550 94 aa0.65□□□□□ -2.31
PRKDC-205ENST00000535375 RPL37P61927 97 aaKnown RBP0.65□□□□□ -2.31
PRKDC-205ENST00000535375 NCS1P62166 190 aa0.65□□□□□ -2.31
PRKDC-205ENST00000535375 KLKP1Q107X0 134 aa0.65□□□□□ -2.31
PRKDC-205ENST00000535375 SPINK13Q1W4C9 94 aa0.65□□□□□ -2.31
PRKDC-205ENST00000535375 SMIM21Q3B7S5 101 aa0.65□□□□□ -2.31
PRKDC-205ENST00000535375 SPATA8Q6RVD6 105 aa0.65□□□□□ -2.31
PRKDC-205ENST00000535375 LZICQ8WZA0 190 aa0.65□□□□□ -2.31
PRKDC-205ENST00000535375 SMG1Q96Q15 3661 aaKnown RBP0.65□□□□□ -2.31
PRKDC-205ENST00000535375 PTPRMP28827 1452 aa0.65□□□□□ -2.31
PRKDC-205ENST00000535375 FAM186AA6NE01 2351 aa0.64□□□□□ -2.31
PRKDC-205ENST00000535375 DNAH14Q0VDD8 3507 aa0.64□□□□□ -2.31
PRKDC-205ENST00000535375 A0A096LNT2 108 aa0.64□□□□□ -2.31
PRKDC-205ENST00000535375 TRAV17A0A0B4J275 112 aa0.64□□□□□ -2.31
PRKDC-205ENST00000535375 SLC25A6P12236 298 aa0.64□□□□□ -2.31
PRKDC-205ENST00000535375 C6orf52Q5T4I8 152 aa0.64□□□□□ -2.31
PRKDC-205ENST00000535375 NDUFA11Q86Y39 141 aa0.64□□□□□ -2.31
PRKDC-205ENST00000535375 VPS25Q9BRG1 176 aa0.64□□□□□ -2.31
PRKDC-205ENST00000535375 SMIM3Q9BZL3 60 aa0.64□□□□□ -2.31
PRKDC-205ENST00000535375 ERCC6Q03468 1493 aa0.64□□□□□ -2.31
PRKDC-205ENST00000535375 CASZ1Q86V15 1759 aa0.64□□□□□ -2.31
PRKDC-205ENST00000535375 DLEC1Q9Y238 1755 aa0.64□□□□□ -2.31
PRKDC-205ENST00000535375 WDFY3Q8IZQ1 3526 aa0.64□□□□□ -2.31
PRKDC-205ENST00000535375 CSMD2Q7Z408 3487 aa0.63□□□□□ -2.31
PRKDC-205ENST00000535375 TEX49A0A1B0GTD5 131 aa0.63□□□□□ -2.31
PRKDC-205ENST00000535375 J3QLW9 94 aa0.63□□□□□ -2.31
PRKDC-205ENST00000535375 COPZ2Q9P299 210 aa0.63□□□□□ -2.31
PRKDC-205ENST00000535375 ATG2AQ2TAZ0 1938 aa0.63□□□□□ -2.31
PRKDC-205ENST00000535375 ACANP16112 2415 aa0.63□□□□□ -2.31
PRKDC-205ENST00000535375 PITX3O75364 302 aa0.62□□□□□ -2.31
PRKDC-205ENST00000535375 OR2T2Q6IF00 324 aa0.62□□□□□ -2.31
PRKDC-205ENST00000535375 CTAGE3PQ8IX95 158 aa0.62□□□□□ -2.31
PRKDC-205ENST00000535375 FAM103A1Q9BTL3 118 aaKnown RBP0.62□□□□□ -2.31
PRKDC-205ENST00000535375 SAR1AQ9NR31 198 aa0.62□□□□□ -2.31
PRKDC-205ENST00000535375 NHSL1Q5SYE7 1610 aa0.62□□□□□ -2.31
PRKDC-205ENST00000535375 PLXNA2O75051 1894 aa0.62□□□□□ -2.31
PRKDC-205ENST00000535375 NBPF19A0A087WUL8 3843 aa0.62□□□□□ -2.31
PRKDC-205ENST00000535375 RREB1Q92766 1687 aa0.62□□□□□ -2.31
PRKDC-205ENST00000535375 ADGRB1O14514 1584 aa0.62□□□□□ -2.31
PRKDC-205ENST00000535375 SPTA1P02549 2419 aa0.62□□□□□ -2.31
PRKDC-205ENST00000535375 FRAS1Q86XX4 4008 aa0.61□□□□□ -2.31
PRKDC-205ENST00000535375 SVEP1Q4LDE5 3571 aa0.61□□□□□ -2.31
PRKDC-205ENST00000535375 USH2AO75445 5202 aa0.61□□□□□ -2.31
PRKDC-205ENST00000535375 CCDC179H3BU77 68 aa0.61□□□□□ -2.31
PRKDC-205ENST00000535375 M0R2Z0 102 aa0.61□□□□□ -2.31
PRKDC-205ENST00000535375 FXYD1O00168 92 aa0.61□□□□□ -2.31
PRKDC-205ENST00000535375 TFF1P04155 84 aa0.61□□□□□ -2.31
PRKDC-205ENST00000535375 SMCO1Q147U7 214 aa0.61□□□□□ -2.31
PRKDC-205ENST00000535375 TMEM14BQ9NUH8 114 aa0.61□□□□□ -2.31
PRKDC-205ENST00000535375 ATMQ13315 3056 aa0.61□□□□□ -2.31
PRKDC-205ENST00000535375 KNTC1P50748 2209 aa0.61□□□□□ -2.31
PRKDC-205ENST00000535375 SPAG17Q6Q759 2223 aa0.61□□□□□ -2.31
PRKDC-205ENST00000535375 LINC01545Q5VT33 79 aa0.6□□□□□ -2.31
PRKDC-205ENST00000535375 MYO15AQ9UKN7 3530 aa0.6□□□□□ -2.31
PRKDC-205ENST00000535375 AFDNP55196 1824 aaKnown RBP0.59□□□□□ -2.31
PRKDC-205ENST00000535375 PTPRZ1P23471 2315 aaPredicted RBP0.59□□□□□ -2.31
PRKDC-205ENST00000535375 CDK5RAP2Q96SN8 1893 aa0.59□□□□□ -2.31
PRKDC-205ENST00000535375 J3QR89 54 aa0.59□□□□□ -2.31
PRKDC-205ENST00000535375 NPFFO15130 113 aa0.59□□□□□ -2.31
PRKDC-205ENST00000535375 PYYP10082 97 aa0.59□□□□□ -2.31
PRKDC-205ENST00000535375 MIC13Q5XKP0 118 aa0.59□□□□□ -2.31
PRKDC-205ENST00000535375 VSTM2AQ8TAG5 236 aa0.59□□□□□ -2.31
PRKDC-205ENST00000535375 ERG28Q9UKR5 140 aa0.59□□□□□ -2.31
PRKDC-205ENST00000535375 CENPEQ02224 2701 aa0.58□□□□□ -2.32
PRKDC-205ENST00000535375 M0R129 80 aa0.58□□□□□ -2.32
PRKDC-205ENST00000535375 APOC1P02654 83 aa0.58□□□□□ -2.32
PRKDC-205ENST00000535375 ELOF1P60002 83 aaKnown RBP0.58□□□□□ -2.32
PRKDC-205ENST00000535375 EMX2Q04743 252 aa0.58□□□□□ -2.32
PRKDC-205ENST00000535375 IFI27L1Q96BM0 104 aa0.58□□□□□ -2.32
PRKDC-205ENST00000535375 KDM5AP29375 1690 aaKnown RBP0.58□□□□□ -2.32
PRKDC-205ENST00000535375 MAP1AP78559 2803 aaPredicted RBP0.57□□□□□ -2.32
PRKDC-205ENST00000535375 ZNF142P52746 1687 aaPredicted RBP0.57□□□□□ -2.32
PRKDC-205ENST00000535375 PPRC1Q5VV67 1664 aaKnown RBP0.57□□□□□ -2.32
PRKDC-205ENST00000535375 TRAV12-2A0A075B6T6 113 aa0.57□□□□□ -2.32
PRKDC-205ENST00000535375 PRH1P02810 166 aa0.57□□□□□ -2.32
PRKDC-205ENST00000535375 SPINK7P58062 85 aa0.57□□□□□ -2.32
PRKDC-205ENST00000535375 RPS25P62851 125 aaKnown RBP0.57□□□□□ -2.32
PRKDC-205ENST00000535375 S100A12P80511 92 aa0.57□□□□□ -2.32
PRKDC-205ENST00000535375 ESPL1Q14674 2120 aa0.57□□□□□ -2.32
PRKDC-205ENST00000535375 TSTD1Q8NFU3 115 aa0.57□□□□□ -2.32
PRKDC-205ENST00000535375 TSKUQ8WUA8 353 aa0.57□□□□□ -2.32
PRKDC-205ENST00000535375 PLAC8Q9NZF1 115 aa0.57□□□□□ -2.32
PRKDC-205ENST00000535375 NDUFA12Q9UI09 145 aa0.57□□□□□ -2.32
PRKDC-205ENST00000535375 WNK1Q9H4A3 2382 aa0.57□□□□□ -2.32
PRKDC-205ENST00000535375 MGAQ8IWI9 3026 aa0.57□□□□□ -2.32
PRKDC-205ENST00000535375 SPENQ96T58 3664 aaKnown RBP0.57□□□□□ -2.32
PRKDC-205ENST00000535375 BICRAQ9NZM4 1560 aa0.57□□□□□ -2.32
PRKDC-205ENST00000535375 ABCA4P78363 2273 aa0.57□□□□□ -2.32
PRKDC-205ENST00000535375 CICQ96RK0 1608 aaPredicted RBP0.56□□□□□ -2.32
PRKDC-205ENST00000535375 BCORL1Q5H9F3 1711 aa0.56□□□□□ -2.32
PRKDC-205ENST00000535375 ZNF670-ZNF695F2Z2N8 137 aa0.56□□□□□ -2.32
PRKDC-205ENST00000535375 COX4I1P13073 169 aa0.56□□□□□ -2.32
PRKDC-205ENST00000535375 NPC2P61916 151 aa0.56□□□□□ -2.32
PRKDC-205ENST00000535375 Q6ZUT4 128 aa0.56□□□□□ -2.32
PRKDC-205ENST00000535375 TMEM141Q96I45 108 aa0.56□□□□□ -2.32
PRKDC-205ENST00000535375 SDF2Q99470 211 aa0.56□□□□□ -2.32
PRKDC-205ENST00000535375 TPT1P8Q9HAU6 139 aa0.56□□□□□ -2.32
PRKDC-205ENST00000535375 BET1LQ9NYM9 111 aa0.56□□□□□ -2.32
PRKDC-205ENST00000535375 MUC12Q9UKN1 5478 aa0.56□□□□□ -2.32
PRKDC-205ENST00000535375 DCHS2Q6V1P9 2916 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms