RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 SCGB1D1O95968 90 aa4.22□□□□□ -1.73
CPSF7-214ENST00000535222 SLC25A6P12236 298 aa4.22□□□□□ -1.73
CPSF7-214ENST00000535222 TBPP20226 339 aa4.22□□□□□ -1.73
CPSF7-214ENST00000535222 DDTP30046 118 aa4.22□□□□□ -1.73
CPSF7-214ENST00000535222 SDC2P34741 201 aa4.22□□□□□ -1.73
CPSF7-214ENST00000535222 RAB5BP61020 215 aa4.22□□□□□ -1.73
CPSF7-214ENST00000535222 TEX261Q6UWH6 196 aa4.22□□□□□ -1.73
CPSF7-214ENST00000535222 FP248Q71RG6 208 aaPredicted RBP4.22□□□□□ -1.73
CPSF7-214ENST00000535222 PHF5AQ7RTV0 110 aaKnown RBP4.22□□□□□ -1.73
CPSF7-214ENST00000535222 C9orf62Q8N4C0 152 aa4.22□□□□□ -1.73
CPSF7-214ENST00000535222 TYMSOSQ8TAI1 123 aa4.22□□□□□ -1.73
CPSF7-214ENST00000535222 TSKUQ8WUA8 353 aa4.22□□□□□ -1.73
CPSF7-214ENST00000535222 HYLS1Q96M11 299 aa4.22□□□□□ -1.73
CPSF7-214ENST00000535222 PACRGQ96M98 296 aaPredicted RBP4.22□□□□□ -1.73
CPSF7-214ENST00000535222 TPPP3Q9BW30 176 aa4.22□□□□□ -1.73
CPSF7-214ENST00000535222 SCN3BQ9NY72 215 aa4.22□□□□□ -1.73
CPSF7-214ENST00000535222 COMMD3Q9UBI1 195 aa4.22□□□□□ -1.73
CPSF7-214ENST00000535222 MGAT4CQ9UBM8 478 aa4.22□□□□□ -1.73
CPSF7-214ENST00000535222 TIMM9Q9Y5J7 89 aa4.22□□□□□ -1.73
CPSF7-214ENST00000535222 SMCO3A2RU48 225 aa4.21□□□□□ -1.74
CPSF7-214ENST00000535222 GOSR2O14653 212 aa4.21□□□□□ -1.74
CPSF7-214ENST00000535222 AGPAT2O15120 278 aa4.21□□□□□ -1.74
CPSF7-214ENST00000535222 ARPC5O15511 151 aa4.21□□□□□ -1.74
CPSF7-214ENST00000535222 SYNGR2O43760 224 aa4.21□□□□□ -1.74
CPSF7-214ENST00000535222 TSHBP01222 138 aa4.21□□□□□ -1.74
CPSF7-214ENST00000535222 NBEAP1P0C6P0 100 aa4.21□□□□□ -1.74
CPSF7-214ENST00000535222 S100A11P31949 105 aa4.21□□□□□ -1.74
CPSF7-214ENST00000535222 UBE2G2P60604 165 aa4.21□□□□□ -1.74
CPSF7-214ENST00000535222 EIF5AP63241 154 aaKnown RBP4.21□□□□□ -1.74
CPSF7-214ENST00000535222 SLC38A11Q08AI6 406 aa4.21□□□□□ -1.74
CPSF7-214ENST00000535222 Q5BKY6 102 aa4.21□□□□□ -1.74
CPSF7-214ENST00000535222 C9orf116Q5BN46 136 aaPredicted RBP4.21□□□□□ -1.74
CPSF7-214ENST00000535222 UBE2NLQ5JXB2 153 aa4.21□□□□□ -1.74
CPSF7-214ENST00000535222 NTM-AS1Q6ZSK4 140 aa4.21□□□□□ -1.74
CPSF7-214ENST00000535222 C20orf203Q8NBC4 194 aa4.21□□□□□ -1.74
CPSF7-214ENST00000535222 SMIM12Q96EX1 92 aa4.21□□□□□ -1.74
CPSF7-214ENST00000535222 CHCHD5Q9BSY4 110 aa4.21□□□□□ -1.74
CPSF7-214ENST00000535222 GPR132Q9UNW8 380 aa4.21□□□□□ -1.74
CPSF7-214ENST00000535222 A0A1B0GUV1 79 aa4.2□□□□□ -1.74
CPSF7-214ENST00000535222 A0A1B0GV72 72 aa4.2□□□□□ -1.74
CPSF7-214ENST00000535222 C5orf52A6NGY3 159 aa4.2□□□□□ -1.74
CPSF7-214ENST00000535222 RHODO00212 210 aa4.2□□□□□ -1.74
CPSF7-214ENST00000535222 SCGB1A1P11684 91 aa4.2□□□□□ -1.74
CPSF7-214ENST00000535222 RPL36AP83881 106 aaKnown RBP4.2□□□□□ -1.74
CPSF7-214ENST00000535222 IFITM3Q01628 133 aa4.2□□□□□ -1.74
CPSF7-214ENST00000535222 HIGD2BQ4VC39 106 aa4.2□□□□□ -1.74
CPSF7-214ENST00000535222 SPANXN5Q5MJ07 72 aa4.2□□□□□ -1.74
CPSF7-214ENST00000535222 RPL36ALQ969Q0 106 aaKnown RBP4.2□□□□□ -1.74
CPSF7-214ENST00000535222 CCDC32Q9BV29 185 aa4.2□□□□□ -1.74
CPSF7-214ENST00000535222 KRTAP9-8Q9BYQ0 159 aa4.2□□□□□ -1.74
CPSF7-214ENST00000535222 KRTAP4-8Q9BYQ9 185 aa4.2□□□□□ -1.74
CPSF7-214ENST00000535222 NAA50Q9GZZ1 169 aaKnown RBP4.2□□□□□ -1.74
CPSF7-214ENST00000535222 VCX2Q9H322 139 aa4.2□□□□□ -1.74
CPSF7-214ENST00000535222 JPT2Q9H910 190 aa4.2□□□□□ -1.74
CPSF7-214ENST00000535222 C11orf21Q9P2W6 132 aa4.2□□□□□ -1.74
CPSF7-214ENST00000535222 TPRKBQ9Y3C4 175 aa4.2□□□□□ -1.74
CPSF7-214ENST00000535222 STRAPQ9Y3F4 350 aaKnown RBP4.2□□□□□ -1.74
CPSF7-214ENST00000535222 A0A087WZ39 114 aa4.19□□□□□ -1.74
CPSF7-214ENST00000535222 H3BS24 57 aa4.19□□□□□ -1.74
CPSF7-214ENST00000535222 CD3DP04234 171 aa4.19□□□□□ -1.74
CPSF7-214ENST00000535222 ZNF25P17030 456 aaPredicted RBP4.19□□□□□ -1.74
CPSF7-214ENST00000535222 RAB5CP51148 216 aa4.19□□□□□ -1.74
CPSF7-214ENST00000535222 SS18Q15532 418 aa4.19□□□□□ -1.74
CPSF7-214ENST00000535222 KRTAP19-6Q3LI70 58 aa4.19□□□□□ -1.74
CPSF7-214ENST00000535222 MTURNQ8N3F0 131 aa4.19□□□□□ -1.74
CPSF7-214ENST00000535222 C14orf166Q9Y224 244 aaKnown RBP4.19□□□□□ -1.74
CPSF7-214ENST00000535222 TRAV34A0A0B4J273 112 aa4.18□□□□□ -1.74
CPSF7-214ENST00000535222 DUXBA0A1W2PPF3 345 aa4.18□□□□□ -1.74
CPSF7-214ENST00000535222 PYYP10082 97 aa4.18□□□□□ -1.74
CPSF7-214ENST00000535222 PVALBP20472 110 aaPredicted RBP4.18□□□□□ -1.74
CPSF7-214ENST00000535222 RPS20P60866 119 aaKnown RBP4.18□□□□□ -1.74
CPSF7-214ENST00000535222 TMEM97Q5BJF2 176 aa4.18□□□□□ -1.74
CPSF7-214ENST00000535222 SPANXN2Q5MJ10 180 aa4.18□□□□□ -1.74
CPSF7-214ENST00000535222 LINC00304Q8N9R0 145 aa4.18□□□□□ -1.74
CPSF7-214ENST00000535222 TVP23CQ96ET8 276 aa4.18□□□□□ -1.74
CPSF7-214ENST00000535222 DIRAS2Q96HU8 199 aa4.18□□□□□ -1.74
CPSF7-214ENST00000535222 CARD19Q96LW7 228 aa4.18□□□□□ -1.74
CPSF7-214ENST00000535222 MGST2Q99735 147 aa4.18□□□□□ -1.74
CPSF7-214ENST00000535222 LINC00846Q9NV44 126 aa4.18□□□□□ -1.74
CPSF7-214ENST00000535222 PRR13Q9NZ81 148 aa4.18□□□□□ -1.74
CPSF7-214ENST00000535222 PIGBOS1A0A0B4J2F0 54 aa4.17□□□□□ -1.74
CPSF7-214ENST00000535222 LOC107984640A0A0U1RRK4 108 aa4.17□□□□□ -1.74
CPSF7-214ENST00000535222 A0A1W2PPV4 95 aa4.17□□□□□ -1.74
CPSF7-214ENST00000535222 ZNF861PO60384 105 aa4.17□□□□□ -1.74
CPSF7-214ENST00000535222 FGF6P10767 208 aa4.17□□□□□ -1.74
CPSF7-214ENST00000535222 S100A10P60903 97 aa4.17□□□□□ -1.74
CPSF7-214ENST00000535222 MXD1Q05195 221 aa4.17□□□□□ -1.74
CPSF7-214ENST00000535222 KRTAP13-2Q52LG2 175 aa4.17□□□□□ -1.74
CPSF7-214ENST00000535222 TMEM14EPQ6UXP3 125 aa4.17□□□□□ -1.74
CPSF7-214ENST00000535222 Q6ZRG5 221 aa4.17□□□□□ -1.74
CPSF7-214ENST00000535222 OR1L4Q8NGR5 311 aa4.17□□□□□ -1.74
CPSF7-214ENST00000535222 SOSTQ9BQB4 213 aa4.17□□□□□ -1.74
CPSF7-214ENST00000535222 NKX6-2Q9C056 277 aaPredicted RBP4.17□□□□□ -1.74
CPSF7-214ENST00000535222 GPN1Q9HCN4 374 aaPredicted RBP4.17□□□□□ -1.74
CPSF7-214ENST00000535222 HSPB11Q9Y547 144 aa4.17□□□□□ -1.74
CPSF7-214ENST00000535222 IGLV4-60A0A075B6I1 120 aa4.16□□□□□ -1.74
CPSF7-214ENST00000535222 GAGE12HA6NDE8 117 aa4.16□□□□□ -1.74
CPSF7-214ENST00000535222 C1orf196B1AJZ1 125 aa4.16□□□□□ -1.74
CPSF7-214ENST00000535222 H3BP45 60 aa4.16□□□□□ -1.74
CPSF7-214ENST00000535222 M0R143 59 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 257 ms