RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 GAGE13Q4V321 117 aa6.14□□□□□ -1.43
SFSWAP-202ENST00000535202 MIC13Q5XKP0 118 aa6.14□□□□□ -1.43
SFSWAP-202ENST00000535202 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.14□□□□□ -1.43
SFSWAP-202ENST00000535202 AP5S1Q9NUS5 200 aa6.14□□□□□ -1.43
SFSWAP-202ENST00000535202 PRO0461Q9UI25 63 aa6.14□□□□□ -1.43
SFSWAP-202ENST00000535202 KLF12Q9Y4X4 402 aa6.14□□□□□ -1.43
SFSWAP-202ENST00000535202 DNAH10Q8IVF4 4471 aa6.14□□□□□ -1.43
SFSWAP-202ENST00000535202 DEFB131BA0A096LNP1 70 aa6.13□□□□□ -1.43
SFSWAP-202ENST00000535202 A0A0J9YX75 114 aa6.13□□□□□ -1.43
SFSWAP-202ENST00000535202 HIGD1CA8MV81 97 aa6.13□□□□□ -1.43
SFSWAP-202ENST00000535202 H3BRN7 92 aa6.13□□□□□ -1.43
SFSWAP-202ENST00000535202 M0QXV9 152 aa6.13□□□□□ -1.43
SFSWAP-202ENST00000535202 FOXA3P55318 350 aaPredicted RBP6.13□□□□□ -1.43
SFSWAP-202ENST00000535202 SPATA31B1PQ5VZV4 182 aa6.13□□□□□ -1.43
SFSWAP-202ENST00000535202 IGFL4Q6B9Z1 124 aa6.13□□□□□ -1.43
SFSWAP-202ENST00000535202 LINC00173Q6ZV60 143 aa6.13□□□□□ -1.43
SFSWAP-202ENST00000535202 ANAPC13Q9BS18 74 aa6.13□□□□□ -1.43
SFSWAP-202ENST00000535202 CDIP1Q9H305 208 aa6.13□□□□□ -1.43
SFSWAP-202ENST00000535202 RPP21Q9H633 154 aaKnown RBP6.13□□□□□ -1.43
SFSWAP-202ENST00000535202 SPANXCQ9NY87 97 aa6.13□□□□□ -1.43
SFSWAP-202ENST00000535202 HIGD1AQ9Y241 93 aa6.13□□□□□ -1.43
SFSWAP-202ENST00000535202 TRBV6-1A0A0K0K1D8 114 aa6.12□□□□□ -1.43
SFSWAP-202ENST00000535202 A0A1B0GWB2 263 aa6.12□□□□□ -1.43
SFSWAP-202ENST00000535202 SMIM9A6NGZ8 99 aa6.12□□□□□ -1.43
SFSWAP-202ENST00000535202 GGTLC3B5MD39 225 aa6.12□□□□□ -1.43
SFSWAP-202ENST00000535202 FOXI1Q12951 378 aa6.12□□□□□ -1.43
SFSWAP-202ENST00000535202 WFDC2Q14508 124 aa6.12□□□□□ -1.43
SFSWAP-202ENST00000535202 Q6Q795 121 aa6.12□□□□□ -1.43
SFSWAP-202ENST00000535202 Q6ZUT4 128 aa6.12□□□□□ -1.43
SFSWAP-202ENST00000535202 C17orf77Q96MU5 243 aa6.12□□□□□ -1.43
SFSWAP-202ENST00000535202 SHANK2-AS3Q9BTD1 123 aa6.12□□□□□ -1.43
SFSWAP-202ENST00000535202 SPANXDQ9BXN6 97 aa6.12□□□□□ -1.43
SFSWAP-202ENST00000535202 SLC25A39Q9BZJ4 359 aaPredicted RBP6.12□□□□□ -1.43
SFSWAP-202ENST00000535202 TRAV8-2A0A0B4J237 113 aa6.11□□□□□ -1.43
SFSWAP-202ENST00000535202 PEX7O00628 323 aa6.11□□□□□ -1.43
SFSWAP-202ENST00000535202 SPART-AS1P0CW21 52 aa6.11□□□□□ -1.43
SFSWAP-202ENST00000535202 RPL7P18124 248 aaKnown RBP6.11□□□□□ -1.43
SFSWAP-202ENST00000535202 LYRM7Q5U5X0 104 aa6.11□□□□□ -1.43
SFSWAP-202ENST00000535202 Q6AWC8 147 aa6.11□□□□□ -1.43
SFSWAP-202ENST00000535202 C1orf158Q8N1D5 194 aa6.11□□□□□ -1.43
SFSWAP-202ENST00000535202 RNF182Q8N6D2 247 aa6.11□□□□□ -1.43
SFSWAP-202ENST00000535202 PPDPFLQ8WWR9 84 aa6.11□□□□□ -1.43
SFSWAP-202ENST00000535202 SLC25A2Q9BXI2 301 aa6.11□□□□□ -1.43
SFSWAP-202ENST00000535202 TP73-AS1Q9UF72 201 aa6.11□□□□□ -1.43
SFSWAP-202ENST00000535202 GAGE12JA6NER3 117 aa6.1□□□□□ -1.43
SFSWAP-202ENST00000535202 A8MTW9 85 aa6.1□□□□□ -1.43
SFSWAP-202ENST00000535202 NPIPB6E9PJ23 425 aa6.1□□□□□ -1.43
SFSWAP-202ENST00000535202 GAGE7O76087 117 aa6.1□□□□□ -1.43
SFSWAP-202ENST00000535202 DUSP14O95147 198 aaKnown RBP6.1□□□□□ -1.43
SFSWAP-202ENST00000535202 APOMO95445 188 aa6.1□□□□□ -1.43
SFSWAP-202ENST00000535202 GAGE12FP0CL80 117 aa6.1□□□□□ -1.43
SFSWAP-202ENST00000535202 GAGE12GP0CL81 117 aa6.1□□□□□ -1.43
SFSWAP-202ENST00000535202 GAGE12IP0CL82 117 aa6.1□□□□□ -1.43
SFSWAP-202ENST00000535202 ASIPP42127 132 aa6.1□□□□□ -1.43
SFSWAP-202ENST00000535202 RPL32P62910 135 aaKnown RBP6.1□□□□□ -1.43
SFSWAP-202ENST00000535202 HERV-K104P63124 156 aa6.1□□□□□ -1.43
SFSWAP-202ENST00000535202 GAGE4Q13068 117 aa6.1□□□□□ -1.43
SFSWAP-202ENST00000535202 SPINK13Q1W4C9 94 aa6.1□□□□□ -1.43
SFSWAP-202ENST00000535202 RRN3P1Q2M238 152 aa6.1□□□□□ -1.43
SFSWAP-202ENST00000535202 FAM222AQ5U5X8 452 aa6.1□□□□□ -1.43
SFSWAP-202ENST00000535202 AMTNQ6UX39 209 aa6.1□□□□□ -1.43
SFSWAP-202ENST00000535202 MIR17HGQ75NE6 70 aa6.1□□□□□ -1.43
SFSWAP-202ENST00000535202 CEND1Q8N111 149 aa6.1□□□□□ -1.43
SFSWAP-202ENST00000535202 ZNF503Q96F45 646 aa6.1□□□□□ -1.43
SFSWAP-202ENST00000535202 MLST8Q9BVC4 326 aa6.1□□□□□ -1.43
SFSWAP-202ENST00000535202 TMEM126AQ9H061 195 aa6.1□□□□□ -1.43
SFSWAP-202ENST00000535202 DKK2Q9UBU2 259 aa6.1□□□□□ -1.43
SFSWAP-202ENST00000535202 FRAS1Q86XX4 4008 aa6.1□□□□□ -1.43
SFSWAP-202ENST00000535202 C19orf71A6NCJ1 209 aa6.09□□□□□ -1.43
SFSWAP-202ENST00000535202 LINC01546A6NGU7 62 aa6.09□□□□□ -1.43
SFSWAP-202ENST00000535202 FBLL1A6NHQ2 334 aaKnown RBP6.09□□□□□ -1.43
SFSWAP-202ENST00000535202 INSP01308 110 aa6.09□□□□□ -1.43
SFSWAP-202ENST00000535202 PRB4P10163 310 aaPredicted RBP6.09□□□□□ -1.43
SFSWAP-202ENST00000535202 HTN3P15516 51 aa6.09□□□□□ -1.43
SFSWAP-202ENST00000535202 CAMPP49913 170 aa6.09□□□□□ -1.43
SFSWAP-202ENST00000535202 RIGQ13278 110 aa6.09□□□□□ -1.43
SFSWAP-202ENST00000535202 ETDBQ3ZM63 59 aa6.09□□□□□ -1.43
SFSWAP-202ENST00000535202 PATE2Q6UY27 113 aa6.09□□□□□ -1.43
SFSWAP-202ENST00000535202 OR1L4Q8NGR5 311 aa6.09□□□□□ -1.43
SFSWAP-202ENST00000535202 RAB37Q96AX2 223 aa6.09□□□□□ -1.43
SFSWAP-202ENST00000535202 FMC1Q96HJ9 113 aa6.09□□□□□ -1.43
SFSWAP-202ENST00000535202 SS18L2Q9UHA2 77 aa6.09□□□□□ -1.43
SFSWAP-202ENST00000535202 TRAV12-2A0A075B6T6 113 aa6.08□□□□□ -1.44
SFSWAP-202ENST00000535202 RHODO00212 210 aa6.08□□□□□ -1.44
SFSWAP-202ENST00000535202 MRPS12O15235 138 aaKnown RBP6.08□□□□□ -1.44
SFSWAP-202ENST00000535202 COX7A2P2O60397 106 aa6.08□□□□□ -1.44
SFSWAP-202ENST00000535202 P01737 135 aa6.08□□□□□ -1.44
SFSWAP-202ENST00000535202 P0DMU3 169 aa6.08□□□□□ -1.44
SFSWAP-202ENST00000535202 FAM231AP0DMU4 169 aa6.08□□□□□ -1.44
SFSWAP-202ENST00000535202 FAM231CP0DMU5 169 aa6.08□□□□□ -1.44
SFSWAP-202ENST00000535202 EVI2AP22794 236 aa6.08□□□□□ -1.44
SFSWAP-202ENST00000535202 ZNF493Q6ZR52 646 aa6.08□□□□□ -1.44
SFSWAP-202ENST00000535202 LINC00305Q7Z4B0 112 aa6.08□□□□□ -1.44
SFSWAP-202ENST00000535202 ZC2HC1AQ96GY0 325 aa6.08□□□□□ -1.44
SFSWAP-202ENST00000535202 FAM167A-AS1Q96KT0 104 aa6.08□□□□□ -1.44
SFSWAP-202ENST00000535202 CHAC1Q9BUX1 264 aa6.08□□□□□ -1.44
SFSWAP-202ENST00000535202 LTAP01374 205 aa6.07□□□□□ -1.44
SFSWAP-202ENST00000535202 HBDP02042 147 aa6.07□□□□□ -1.44
SFSWAP-202ENST00000535202 PRM2P04554 102 aa6.07□□□□□ -1.44
SFSWAP-202ENST00000535202 DAD1P61803 113 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms