RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 Q6ZRP5 223 aa4.81□□□□□ -1.64
NXF1-215ENST00000533440 ZFP82Q8N141 532 aa4.81□□□□□ -1.64
NXF1-215ENST00000533440 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.81□□□□□ -1.64
NXF1-215ENST00000533440 C20orf203Q8NBC4 194 aa4.81□□□□□ -1.64
NXF1-215ENST00000533440 LYPD6BQ8NI32 183 aa4.81□□□□□ -1.64
NXF1-215ENST00000533440 SCGB1C1Q8TD33 95 aa4.81□□□□□ -1.64
NXF1-215ENST00000533440 HSPB11Q9Y547 144 aa4.81□□□□□ -1.64
NXF1-215ENST00000533440 ARL2-SNX15V9GYD0 113 aa4.81□□□□□ -1.64
NXF1-215ENST00000533440 MUC17Q685J3 4493 aa4.81□□□□□ -1.64
NXF1-215ENST00000533440 TRBV25-1A0A075B6N4 114 aa4.8□□□□□ -1.64
NXF1-215ENST00000533440 TRAV34A0A0B4J273 112 aa4.8□□□□□ -1.64
NXF1-215ENST00000533440 TRBV6-1A0A0K0K1D8 114 aa4.8□□□□□ -1.64
NXF1-215ENST00000533440 M0R036 132 aa4.8□□□□□ -1.64
NXF1-215ENST00000533440 SIX6O95475 246 aa4.8□□□□□ -1.64
NXF1-215ENST00000533440 RPS10P46783 165 aaKnown RBP4.8□□□□□ -1.64
NXF1-215ENST00000533440 IQCJQ1A5X6 159 aa4.8□□□□□ -1.64
NXF1-215ENST00000533440 LRRC37A5PQ49AS3 106 aa4.8□□□□□ -1.64
NXF1-215ENST00000533440 COX8CQ7Z4L0 72 aa4.8□□□□□ -1.64
NXF1-215ENST00000533440 C15orf56Q8N910 161 aa4.8□□□□□ -1.64
NXF1-215ENST00000533440 DERL1Q9BUN8 251 aa4.8□□□□□ -1.64
NXF1-215ENST00000533440 A0A096LNI7 61 aa4.79□□□□□ -1.64
NXF1-215ENST00000533440 A0A1B0GUV1 79 aa4.79□□□□□ -1.64
NXF1-215ENST00000533440 FAM231BA6NCW3 169 aa4.79□□□□□ -1.64
NXF1-215ENST00000533440 SH2D1AO60880 128 aa4.79□□□□□ -1.64
NXF1-215ENST00000533440 GCHFRP30047 84 aa4.79□□□□□ -1.64
NXF1-215ENST00000533440 CDC34P49427 236 aaPredicted RBP4.79□□□□□ -1.64
NXF1-215ENST00000533440 ZNF56Q15929 161 aa4.79□□□□□ -1.64
NXF1-215ENST00000533440 SMIM3Q9BZL3 60 aa4.79□□□□□ -1.64
NXF1-215ENST00000533440 GFRA4Q9GZZ7 299 aa4.79□□□□□ -1.64
NXF1-215ENST00000533440 WFDC1Q9HC57 220 aa4.79□□□□□ -1.64
NXF1-215ENST00000533440 IGLV4-60A0A075B6I1 120 aa4.78□□□□□ -1.64
NXF1-215ENST00000533440 IFNA7P01567 189 aa4.78□□□□□ -1.64
NXF1-215ENST00000533440 RAB5CP51148 216 aa4.78□□□□□ -1.64
NXF1-215ENST00000533440 CYCSP99999 105 aaKnown RBP4.78□□□□□ -1.64
NXF1-215ENST00000533440 CFAP161Q6P656 301 aa4.78□□□□□ -1.64
NXF1-215ENST00000533440 Q86TA4 180 aa4.78□□□□□ -1.64
NXF1-215ENST00000533440 ZNF664Q8N3J9 261 aa4.78□□□□□ -1.64
NXF1-215ENST00000533440 RAB24Q969Q5 203 aa4.78□□□□□ -1.64
NXF1-215ENST00000533440 TMEM167BQ9NRX6 74 aa4.78□□□□□ -1.64
NXF1-215ENST00000533440 PSORS1C2Q9UIG4 136 aa4.78□□□□□ -1.64
NXF1-215ENST00000533440 TMSB15BA0A087X1C1 80 aa4.77□□□□□ -1.65
NXF1-215ENST00000533440 IGHV1-24A0A0C4DH33 117 aa4.77□□□□□ -1.65
NXF1-215ENST00000533440 A0A1W2PRE2 83 aa4.77□□□□□ -1.65
NXF1-215ENST00000533440 RPL12P30050 165 aaKnown RBP4.77□□□□□ -1.65
NXF1-215ENST00000533440 ZNF674Q2M3X9 581 aa4.77□□□□□ -1.65
NXF1-215ENST00000533440 FAM162BQ5T6X4 162 aa4.77□□□□□ -1.65
NXF1-215ENST00000533440 PPP1R1CQ8WVI7 109 aa4.77□□□□□ -1.65
NXF1-215ENST00000533440 LINC00474Q9P2X8 69 aa4.77□□□□□ -1.65
NXF1-215ENST00000533440 GVQW2A0A096LPI5 108 aaPredicted RBP4.76□□□□□ -1.65
NXF1-215ENST00000533440 CCDC160A6NGH7 325 aa4.76□□□□□ -1.65
NXF1-215ENST00000533440 PEX7O00628 323 aa4.76□□□□□ -1.65
NXF1-215ENST00000533440 CXorf1O96002 111 aa4.76□□□□□ -1.65
NXF1-215ENST00000533440 H2BFSP57053 126 aa4.76□□□□□ -1.65
NXF1-215ENST00000533440 HIGD2BQ4VC39 106 aa4.76□□□□□ -1.65
NXF1-215ENST00000533440 INO80EQ8NBZ0 244 aaPredicted RBP4.76□□□□□ -1.65
NXF1-215ENST00000533440 OR10AG1Q8NH19 301 aa4.76□□□□□ -1.65
NXF1-215ENST00000533440 AQP10Q96PS8 301 aa4.76□□□□□ -1.65
NXF1-215ENST00000533440 ZFP30Q9Y2G7 519 aa4.76□□□□□ -1.65
NXF1-215ENST00000533440 TRAV26-2A0A0B4J265 109 aa4.75□□□□□ -1.65
NXF1-215ENST00000533440 FAM240BA0A1B0GVZ2 78 aa4.75□□□□□ -1.65
NXF1-215ENST00000533440 GAGE12HA6NDE8 117 aa4.75□□□□□ -1.65
NXF1-215ENST00000533440 MPC2O95563 127 aa4.75□□□□□ -1.65
NXF1-215ENST00000533440 CXCL1P09341 107 aa4.75□□□□□ -1.65
NXF1-215ENST00000533440 PRR26Q8N8Z3 221 aa4.75□□□□□ -1.65
NXF1-215ENST00000533440 HIST1H2BAQ96A08 127 aa4.75□□□□□ -1.65
NXF1-215ENST00000533440 ZNF471Q9BX82 626 aaPredicted RBP4.75□□□□□ -1.65
NXF1-215ENST00000533440 F5H697 171 aa4.74□□□□□ -1.65
NXF1-215ENST00000533440 SNAI2O43623 268 aa4.74□□□□□ -1.65
NXF1-215ENST00000533440 PET100P0DJ07 73 aa4.74□□□□□ -1.65
NXF1-215ENST00000533440 CACNG7P62955 275 aa4.74□□□□□ -1.65
NXF1-215ENST00000533440 XP32Q5T750 250 aa4.74□□□□□ -1.65
NXF1-215ENST00000533440 PSMG3Q9BT73 122 aaPredicted RBP4.74□□□□□ -1.65
NXF1-215ENST00000533440 TMEM243Q9BU79 118 aa4.74□□□□□ -1.65
NXF1-215ENST00000533440 PKIGQ9Y2B9 76 aa4.74□□□□□ -1.65
NXF1-215ENST00000533440 M0QY20 66 aa4.73□□□□□ -1.65
NXF1-215ENST00000533440 LTAP01374 205 aa4.73□□□□□ -1.65
NXF1-215ENST00000533440 MBP02144 154 aa4.73□□□□□ -1.65
NXF1-215ENST00000533440 OR5AL1P0C617 328 aa4.73□□□□□ -1.65
NXF1-215ENST00000533440 ATP6V0CP27449 155 aa4.73□□□□□ -1.65
NXF1-215ENST00000533440 SULT1A2P50226 295 aa4.73□□□□□ -1.65
NXF1-215ENST00000533440 SERF2P84101 59 aa4.73□□□□□ -1.65
NXF1-215ENST00000533440 PRR4Q16378 134 aa4.73□□□□□ -1.65
NXF1-215ENST00000533440 FMC1Q96HJ9 113 aa4.73□□□□□ -1.65
NXF1-215ENST00000533440 NKX6-2Q9C056 277 aaPredicted RBP4.73□□□□□ -1.65
NXF1-215ENST00000533440 ACTR3CQ9C0K3 210 aaPredicted RBP4.73□□□□□ -1.65
NXF1-215ENST00000533440 LOC100996750A0A140TA64 210 aa4.72□□□□□ -1.65
NXF1-215ENST00000533440 FAM74A7A6NL05 159 aa4.72□□□□□ -1.65
NXF1-215ENST00000533440 UBE2G2P60604 165 aa4.72□□□□□ -1.65
NXF1-215ENST00000533440 SPANXN1Q5VSR9 72 aa4.72□□□□□ -1.65
NXF1-215ENST00000533440 CHCHD10Q8WYQ3 142 aaPredicted RBP4.72□□□□□ -1.65
NXF1-215ENST00000533440 PGLYRP4Q96LB8 373 aa4.72□□□□□ -1.65
NXF1-215ENST00000533440 KRTAP4-6Q9BYQ5 205 aa4.72□□□□□ -1.65
NXF1-215ENST00000533440 MED28Q9H204 178 aa4.72□□□□□ -1.65
NXF1-215ENST00000533440 TNFSF18Q9UNG2 199 aa4.72□□□□□ -1.65
NXF1-215ENST00000533440 MUC21A0A140T8X8 626 aa4.71□□□□□ -1.66
NXF1-215ENST00000533440 A0A1W2PNN7 141 aa4.71□□□□□ -1.66
NXF1-215ENST00000533440 SMIM17P0DL12 118 aa4.71□□□□□ -1.66
NXF1-215ENST00000533440 PTTG1IPP53801 180 aa4.71□□□□□ -1.66
NXF1-215ENST00000533440 UBE2G1P62253 170 aa4.71□□□□□ -1.66
NXF1-215ENST00000533440 FOXI1Q12951 378 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms