RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 NHLRC4P0CG21 123 aaPredicted RBP5.25□□□□□ -1.57
TGFBR3-209ENST00000532540 RBM3P98179 157 aaKnown RBP5.25□□□□□ -1.57
TGFBR3-209ENST00000532540 HIST2H2BDQ6DRA6 164 aa5.25□□□□□ -1.57
TGFBR3-209ENST00000532540 DEFB104AQ8WTQ1 72 aa5.25□□□□□ -1.57
TGFBR3-209ENST00000532540 TMEM141Q96I45 108 aa5.25□□□□□ -1.57
TGFBR3-209ENST00000532540 TIMM21Q9BVV7 248 aa5.25□□□□□ -1.57
TGFBR3-209ENST00000532540 KLK5Q9Y337 293 aaPredicted RBP5.25□□□□□ -1.57
TGFBR3-209ENST00000532540 U3KQK5 164 aa5.25□□□□□ -1.57
TGFBR3-209ENST00000532540 IGHV3OR16-8A0A075B7F1 116 aa5.25□□□□□ -1.57
TGFBR3-209ENST00000532540 WI2-2373I1.2A0A1W2PRP0 233 aa5.25□□□□□ -1.57
TGFBR3-209ENST00000532540 A0A1W2PRX2 142 aa5.25□□□□□ -1.57
TGFBR3-209ENST00000532540 GAFA1Q96PS6 74 aa5.25□□□□□ -1.57
TGFBR3-209ENST00000532540 IGHV3OR16-13A0A075B7E8 117 aa5.25□□□□□ -1.57
TGFBR3-209ENST00000532540 IGHV3-74A0A0B4J1X5 117 aa5.25□□□□□ -1.57
TGFBR3-209ENST00000532540 TRBV6-1A0A0K0K1D8 114 aa5.25□□□□□ -1.57
TGFBR3-209ENST00000532540 COL6A5A8TX70 2615 aa5.25□□□□□ -1.57
TGFBR3-209ENST00000532540 UBE2D1P51668 147 aa5.25□□□□□ -1.57
TGFBR3-209ENST00000532540 C11orf53Q8IXP5 236 aa5.25□□□□□ -1.57
TGFBR3-209ENST00000532540 BRK1Q8WUW1 75 aa5.25□□□□□ -1.57
TGFBR3-209ENST00000532540 C17orf77Q96MU5 243 aa5.25□□□□□ -1.57
TGFBR3-209ENST00000532540 METTL26Q96S19 204 aa5.25□□□□□ -1.57
TGFBR3-209ENST00000532540 A0A0U1RRA0 63 aa5.24□□□□□ -1.57
TGFBR3-209ENST00000532540 CRYGBP07316 175 aa5.24□□□□□ -1.57
TGFBR3-209ENST00000532540 P0DMU3 169 aa5.24□□□□□ -1.57
TGFBR3-209ENST00000532540 FAM231AP0DMU4 169 aa5.24□□□□□ -1.57
TGFBR3-209ENST00000532540 FAM231CP0DMU5 169 aa5.24□□□□□ -1.57
TGFBR3-209ENST00000532540 FBXL19-AS1Q494R0 122 aa5.24□□□□□ -1.57
TGFBR3-209ENST00000532540 IGFL4Q6B9Z1 124 aa5.24□□□□□ -1.57
TGFBR3-209ENST00000532540 KNCNA6PVL3 124 aa5.24□□□□□ -1.57
TGFBR3-209ENST00000532540 CYSRT1A8MQ03 144 aa5.24□□□□□ -1.57
TGFBR3-209ENST00000532540 IGHV3-33P01772 117 aa5.24□□□□□ -1.57
TGFBR3-209ENST00000532540 EIF4EBP1Q13541 118 aaPredicted RBP5.24□□□□□ -1.57
TGFBR3-209ENST00000532540 VMO1Q7Z5L0 202 aa5.24□□□□□ -1.57
TGFBR3-209ENST00000532540 TRAV21A0A0B4J279 112 aa5.24□□□□□ -1.57
TGFBR3-209ENST00000532540 A0A0J9YY99 117 aa5.24□□□□□ -1.57
TGFBR3-209ENST00000532540 FAM240AA0A1B0GVK7 77 aa5.24□□□□□ -1.57
TGFBR3-209ENST00000532540 CNTFRP26992 372 aa5.24□□□□□ -1.57
TGFBR3-209ENST00000532540 MYCNOSP40205 109 aa5.24□□□□□ -1.57
TGFBR3-209ENST00000532540 DAZAP2Q15038 168 aaPredicted RBP5.24□□□□□ -1.57
TGFBR3-209ENST00000532540 SIGLEC15Q6ZMC9 328 aa5.24□□□□□ -1.57
TGFBR3-209ENST00000532540 RASL10AQ92737 203 aa5.24□□□□□ -1.57
TGFBR3-209ENST00000532540 C1orf159Q96HA4 380 aa5.24□□□□□ -1.57
TGFBR3-209ENST00000532540 IGKV3D-7A0A0C4DH55 119 aa5.23□□□□□ -1.57
TGFBR3-209ENST00000532540 B4DSR2 109 aa5.23□□□□□ -1.57
TGFBR3-209ENST00000532540 RNASE1P07998 156 aaKnown RBP5.23□□□□□ -1.57
TGFBR3-209ENST00000532540 BAALC-AS2P0C853 105 aa5.23□□□□□ -1.57
TGFBR3-209ENST00000532540 ZFP36P26651 326 aaKnown RBP5.23□□□□□ -1.57
TGFBR3-209ENST00000532540 SLC25A29Q8N8R3 303 aa5.23□□□□□ -1.57
TGFBR3-209ENST00000532540 H3BRN7 92 aa5.23□□□□□ -1.57
TGFBR3-209ENST00000532540 PROP1O75360 226 aa5.23□□□□□ -1.57
TGFBR3-209ENST00000532540 MSMBP08118 114 aa5.23□□□□□ -1.57
TGFBR3-209ENST00000532540 CD28P10747 220 aa5.23□□□□□ -1.57
TGFBR3-209ENST00000532540 ZMAT4Q9H898 229 aa5.23□□□□□ -1.57
TGFBR3-209ENST00000532540 A0A0U1RQV1 116 aa5.23□□□□□ -1.57
TGFBR3-209ENST00000532540 TINCRA0A1B0GVN0 87 aa5.23□□□□□ -1.57
TGFBR3-209ENST00000532540 C11orf86A6NJI1 115 aa5.23□□□□□ -1.57
TGFBR3-209ENST00000532540 IGHV3-23P01764 117 aa5.23□□□□□ -1.57
TGFBR3-209ENST00000532540 ERCC8Q13216 396 aa5.23□□□□□ -1.57
TGFBR3-209ENST00000532540 BAALCQ8WXS3 180 aa5.23□□□□□ -1.57
TGFBR3-209ENST00000532540 CLEC2BQ92478 149 aa5.23□□□□□ -1.57
TGFBR3-209ENST00000532540 DSCR8Q96T75 97 aa5.23□□□□□ -1.57
TGFBR3-209ENST00000532540 IGHV3-66A0A0C4DH42 116 aa5.22□□□□□ -1.57
TGFBR3-209ENST00000532540 SOCS3O14543 225 aa5.22□□□□□ -1.57
TGFBR3-209ENST00000532540 BRI3O95415 125 aa5.22□□□□□ -1.57
TGFBR3-209ENST00000532540 RPS28P62857 69 aaKnown RBP5.22□□□□□ -1.57
TGFBR3-209ENST00000532540 RHOHQ15669 191 aa5.22□□□□□ -1.57
TGFBR3-209ENST00000532540 C10orf105Q8TEF2 133 aa5.22□□□□□ -1.57
TGFBR3-209ENST00000532540 OVOL2Q9BRP0 275 aa5.22□□□□□ -1.57
TGFBR3-209ENST00000532540 NDUFA12Q9UI09 145 aa5.22□□□□□ -1.57
TGFBR3-209ENST00000532540 IGHV3-49A0A0A0MS15 119 aa5.22□□□□□ -1.57
TGFBR3-209ENST00000532540 IGHV1-69DA0A0B4J2H0 117 aa5.22□□□□□ -1.57
TGFBR3-209ENST00000532540 H3BUX3 64 aa5.22□□□□□ -1.57
TGFBR3-209ENST00000532540 C1orf195Q5TG92 126 aa5.22□□□□□ -1.57
TGFBR3-209ENST00000532540 RNF152Q8N8N0 203 aa5.22□□□□□ -1.57
TGFBR3-209ENST00000532540 NBEAL1Q6ZS30 2694 aa5.22□□□□□ -1.57
TGFBR3-209ENST00000532540 LOXP28300 417 aaPredicted RBP5.22□□□□□ -1.57
TGFBR3-209ENST00000532540 SAA4P35542 130 aa5.22□□□□□ -1.57
TGFBR3-209ENST00000532540 EEF1AKMT3Q96AZ1 226 aa5.22□□□□□ -1.57
TGFBR3-209ENST00000532540 NIPBLQ6KC79 2804 aaeCLIP5.22□□□□□ -1.57
TGFBR3-209ENST00000532540 LEPROTO15243 131 aa5.21□□□□□ -1.57
TGFBR3-209ENST00000532540 IGHV4-38-2P0DP08 117 aa5.21□□□□□ -1.57
TGFBR3-209ENST00000532540 PFN2P35080 140 aa5.21□□□□□ -1.57
TGFBR3-209ENST00000532540 SERP2Q8N6R1 65 aa5.21□□□□□ -1.57
TGFBR3-209ENST00000532540 TOMM6Q96B49 74 aa5.21□□□□□ -1.57
TGFBR3-209ENST00000532540 ZNF625Q96I27 306 aaPredicted RBP5.21□□□□□ -1.57
TGFBR3-209ENST00000532540 MRPL36Q9P0J6 103 aaKnown RBP5.21□□□□□ -1.57
TGFBR3-209ENST00000532540 DPM3Q9P2X0 92 aa5.21□□□□□ -1.57
TGFBR3-209ENST00000532540 ADARB2-AS1A8MUL3 147 aa5.21□□□□□ -1.58
TGFBR3-209ENST00000532540 M0R1W7 72 aa5.21□□□□□ -1.58
TGFBR3-209ENST00000532540 CRIP2P52943 208 aaPredicted RBP5.21□□□□□ -1.58
TGFBR3-209ENST00000532540 FHL3Q13643 280 aa5.21□□□□□ -1.58
TGFBR3-209ENST00000532540 C17orf58Q2M2W7 97 aa5.21□□□□□ -1.58
TGFBR3-209ENST00000532540 IGKV1D-37A0A075B6S9 117 aa5.21□□□□□ -1.58
TGFBR3-209ENST00000532540 TRBV30A0A0K0K1B3 111 aa5.21□□□□□ -1.58
TGFBR3-209ENST00000532540 IGHV3-11P01762 117 aa5.21□□□□□ -1.58
TGFBR3-209ENST00000532540 IGHG2P01859 326 aa5.21□□□□□ -1.58
TGFBR3-209ENST00000532540 IGHV1-8P0DP01 117 aa5.21□□□□□ -1.58
TGFBR3-209ENST00000532540 C19orf54Q5BKX5 351 aa5.21□□□□□ -1.58
TGFBR3-209ENST00000532540 LY6G5BQ8NDX9 201 aa5.21□□□□□ -1.58
TGFBR3-209ENST00000532540 PSMG3-AS1Q96PY0 264 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms