RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.34■□□□□ 0.05
LRRK1-208ENST00000532029 DNAJC30Q96LL9 226 aa15.34■□□□□ 0.05
LRRK1-208ENST00000532029 UPK3BQ9BT76 320 aa15.34■□□□□ 0.05
LRRK1-208ENST00000532029 GTSF1LQ9H1H1 148 aa15.34■□□□□ 0.05
LRRK1-208ENST00000532029 TNFRSF18Q9Y5U5 241 aa15.34■□□□□ 0.05
LRRK1-208ENST00000532029 C7orf77A4D0Y5 90 aa15.33■□□□□ 0.04
LRRK1-208ENST00000532029 UBE2D3P61077 147 aa15.33■□□□□ 0.04
LRRK1-208ENST00000532029 UBE2D2P62837 147 aa15.33■□□□□ 0.04
LRRK1-208ENST00000532029 ATP5L2Q7Z4Y8 100 aa15.33■□□□□ 0.04
LRRK1-208ENST00000532029 SLC7A5P1Q8MH63 180 aa15.33■□□□□ 0.04
LRRK1-208ENST00000532029 KCNIP4Q6PIL6 250 aa15.32■□□□□ 0.04
LRRK1-208ENST00000532029 IMMP2LQ96T52 175 aa15.32■□□□□ 0.04
LRRK1-208ENST00000532029 IGLV2-18A0A075B6J9 118 aa15.31■□□□□ 0.04
LRRK1-208ENST00000532029 TRAV26-2A0A0B4J265 109 aa15.31■□□□□ 0.04
LRRK1-208ENST00000532029 AMN1Q8IY45 258 aa15.31■□□□□ 0.04
LRRK1-208ENST00000532029 SVBPQ8N300 66 aa15.31■□□□□ 0.04
LRRK1-208ENST00000532029 GATD1Q8NB37 220 aa15.31■□□□□ 0.04
LRRK1-208ENST00000532029 Q9H8V8 135 aa15.31■□□□□ 0.04
LRRK1-208ENST00000532029 RPS10P5Q9NQ39 176 aa15.31■□□□□ 0.04
LRRK1-208ENST00000532029 NIT2Q9NQR4 276 aa15.31■□□□□ 0.04
LRRK1-208ENST00000532029 VPS13DQ5THJ4 4388 aa15.31■□□□□ 0.04
LRRK1-208ENST00000532029 A0A087WWC5 75 aa15.3■□□□□ 0.04
LRRK1-208ENST00000532029 A0A1B0GXF2 115 aa15.3■□□□□ 0.04
LRRK1-208ENST00000532029 FRZBQ92765 325 aa15.3■□□□□ 0.04
LRRK1-208ENST00000532029 BTF3L4Q96K17 158 aa15.3■□□□□ 0.04
LRRK1-208ENST00000532029 TRAV8-6A0A0B4J262 113 aa15.29■□□□□ 0.04
LRRK1-208ENST00000532029 SNAPINO95295 136 aa15.29■□□□□ 0.04
LRRK1-208ENST00000532029 RAB4AP20338 218 aa15.29■□□□□ 0.04
LRRK1-208ENST00000532029 S100PP25815 95 aa15.29■□□□□ 0.04
LRRK1-208ENST00000532029 OR10J3Q5JRS4 329 aa15.29■□□□□ 0.04
LRRK1-208ENST00000532029 LELP1Q5T871 98 aa15.29■□□□□ 0.04
LRRK1-208ENST00000532029 TMEM242Q9NWH2 141 aa15.29■□□□□ 0.04
LRRK1-208ENST00000532029 HYDINQ4G0P3 5121 aa15.29■□□□□ 0.04
LRRK1-208ENST00000532029 SIVA1O15304 175 aa15.28■□□□□ 0.04
LRRK1-208ENST00000532029 MRAP2Q96G30 205 aa15.28■□□□□ 0.04
LRRK1-208ENST00000532029 RNF185Q96GF1 192 aa15.28■□□□□ 0.04
LRRK1-208ENST00000532029 IGHV3-38A0A0C4DH36 116 aa15.27■□□□□ 0.04
LRRK1-208ENST00000532029 FAM104BQ5XKR9 115 aa15.27■□□□□ 0.04
LRRK1-208ENST00000532029 DAZ4Q86SG3 579 aaKnown RBP15.27■□□□□ 0.04
LRRK1-208ENST00000532029 DAZ3Q9NR90 486 aaKnown RBP15.27■□□□□ 0.04
LRRK1-208ENST00000532029 M0R2N4 97 aa15.26■□□□□ 0.03
LRRK1-208ENST00000532029 TRAV9-1A0A075B6T8 112 aa15.25■□□□□ 0.03
LRRK1-208ENST00000532029 WFDC10BQ8IUB3 73 aa15.25■□□□□ 0.03
LRRK1-208ENST00000532029 RPL39LQ96EH5 51 aaKnown RBP15.25■□□□□ 0.03
LRRK1-208ENST00000532029 NBDYA0A0U1RRE5 68 aa15.24■□□□□ 0.03
LRRK1-208ENST00000532029 TMEM97Q5BJF2 176 aa15.24■□□□□ 0.03
LRRK1-208ENST00000532029 URGCP-MRPS24S4R325 110 aa15.24■□□□□ 0.03
LRRK1-208ENST00000532029 MRPL51Q4U2R6 128 aaKnown RBP15.23■□□□□ 0.03
LRRK1-208ENST00000532029 TTC32Q5I0X7 151 aa15.23■□□□□ 0.03
LRRK1-208ENST00000532029 NCR2O95944 276 aa15.22■□□□□ 0.03
LRRK1-208ENST00000532029 SMKR1H3BMG3 65 aa15.21■□□□□ 0.03
LRRK1-208ENST00000532029 PPP1R17O96001 155 aa15.21■□□□□ 0.03
LRRK1-208ENST00000532029 CKS2P33552 79 aa15.21■□□□□ 0.03
LRRK1-208ENST00000532029 TRBV6-8A0A0A6YYG3 113 aa15.2■□□□□ 0.02
LRRK1-208ENST00000532029 TRBV6-5A0A0K0K1A5 114 aa15.2■□□□□ 0.02
LRRK1-208ENST00000532029 GAS8-AS1O95177 125 aa15.2■□□□□ 0.02
LRRK1-208ENST00000532029 ST20Q9HBF5 79 aa15.2■□□□□ 0.02
LRRK1-208ENST00000532029 TRAV9-2A0A087WT02 112 aa15.19■□□□□ 0.02
LRRK1-208ENST00000532029 SDHAF1A6NFY7 115 aa15.19■□□□□ 0.02
LRRK1-208ENST00000532029 DNAH10OSP0CZ25 163 aa15.19■□□□□ 0.02
LRRK1-208ENST00000532029 RPS10P46783 165 aaKnown RBP15.19■□□□□ 0.02
LRRK1-208ENST00000532029 Q6ZR54 194 aa15.19■□□□□ 0.02
LRRK1-208ENST00000532029 COTL1Q14019 142 aa15.18■□□□□ 0.02
LRRK1-208ENST00000532029 TRBV25-1A0A075B6N4 114 aa15.17■□□□□ 0.02
LRRK1-208ENST00000532029 PPBPP02775 128 aa15.17■□□□□ 0.02
LRRK1-208ENST00000532029 LINC01556Q5JQF7 62 aa15.17■□□□□ 0.02
LRRK1-208ENST00000532029 IGHV1-24A0A0C4DH33 117 aa15.16■□□□□ 0.02
LRRK1-208ENST00000532029 D6R8Y8 96 aa15.16■□□□□ 0.02
LRRK1-208ENST00000532029 NTM-AS1Q6ZSK4 140 aa15.16■□□□□ 0.02
LRRK1-208ENST00000532029 NRACQ8N912 160 aa15.16■□□□□ 0.02
LRRK1-208ENST00000532029 CHCHD5Q9BSY4 110 aa15.16■□□□□ 0.02
LRRK1-208ENST00000532029 K7EP13 123 aa15.15■□□□□ 0.02
LRRK1-208ENST00000532029 IGHV3-30P01768 117 aa15.15■□□□□ 0.02
LRRK1-208ENST00000532029 IGHV3-33P01772 117 aa15.15■□□□□ 0.02
LRRK1-208ENST00000532029 IGHV3-30-3P0DP02 117 aa15.15■□□□□ 0.02
LRRK1-208ENST00000532029 IGHV3-30-5P0DP03 117 aa15.15■□□□□ 0.02
LRRK1-208ENST00000532029 PMCHP20382 165 aa15.15■□□□□ 0.02
LRRK1-208ENST00000532029 ORMDL3Q8N138 153 aa15.15■□□□□ 0.02
LRRK1-208ENST00000532029 TMEM70Q9BUB7 260 aa15.15■□□□□ 0.02
LRRK1-208ENST00000532029 I3L3M4 83 aa15.14■□□□□ 0.01
LRRK1-208ENST00000532029 IQCJQ1A5X6 159 aa15.14■□□□□ 0.01
LRRK1-208ENST00000532029 COX19Q49B96 90 aa15.14■□□□□ 0.01
LRRK1-208ENST00000532029 TMEM136Q6ZRR5 245 aa15.14■□□□□ 0.01
LRRK1-208ENST00000532029 NIT1Q86X76 327 aa15.14■□□□□ 0.01
LRRK1-208ENST00000532029 C10orf126Q8N4M7 172 aa15.14■□□□□ 0.01
LRRK1-208ENST00000532029 DEFB104AQ8WTQ1 72 aa15.14■□□□□ 0.01
LRRK1-208ENST00000532029 KRTAP1-5Q9BYS1 174 aa15.14■□□□□ 0.01
LRRK1-208ENST00000532029 DNAH6Q9C0G6 4158 aa15.14■□□□□ 0.01
LRRK1-208ENST00000532029 TMEM262E9PQX1 116 aa15.13■□□□□ 0.01
LRRK1-208ENST00000532029 AMTP48728 403 aa15.13■□□□□ 0.01
LRRK1-208ENST00000532029 PKIAP61925 76 aa15.13■□□□□ 0.01
LRRK1-208ENST00000532029 SUMO2P61956 95 aaKnown RBP15.13■□□□□ 0.01
LRRK1-208ENST00000532029 ATRAIDQ6UW56 229 aa15.13■□□□□ 0.01
LRRK1-208ENST00000532029 A0A087WX48 190 aa15.12■□□□□ 0.01
LRRK1-208ENST00000532029 TNFRSF6BO95407 300 aa15.12■□□□□ 0.01
LRRK1-208ENST00000532029 HLA-DQA1P01909 254 aa15.12■□□□□ 0.01
LRRK1-208ENST00000532029 POLR2KP53803 58 aaKnown RBP15.12■□□□□ 0.01
LRRK1-208ENST00000532029 C1orf134Q5TEV5 83 aa15.12■□□□□ 0.01
LRRK1-208ENST00000532029 PRELID3AQ96N28 172 aa15.12■□□□□ 0.01
LRRK1-208ENST00000532029 C20orf78Q9BR46 151 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms