RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 PTH2Q96A98 100 aa12.66□□□□□ -0.38
BRCA2-204ENST00000530893 C11orf86A6NJI1 115 aa12.65□□□□□ -0.38
BRCA2-204ENST00000530893 SCGB2A2Q13296 93 aa12.64□□□□□ -0.39
BRCA2-204ENST00000530893 DYNLRB2Q8TF09 96 aa12.64□□□□□ -0.39
BRCA2-204ENST00000530893 NAA38Q9BRA0 125 aaKnown RBP12.64□□□□□ -0.39
BRCA2-204ENST00000530893 LINC00467Q9BRT7 94 aa12.64□□□□□ -0.39
BRCA2-204ENST00000530893 CENPEQ02224 2701 aa12.64□□□□□ -0.39
BRCA2-204ENST00000530893 ZNF815PA8K554 130 aa12.64□□□□□ -0.39
BRCA2-204ENST00000530893 A8MWV9 139 aa12.64□□□□□ -0.39
BRCA2-204ENST00000530893 KLHL30-AS1Q8NEE0 82 aa12.64□□□□□ -0.39
BRCA2-204ENST00000530893 DLX4Q92988 240 aaPredicted RBP12.64□□□□□ -0.39
BRCA2-204ENST00000530893 A0A1B0GWB2 263 aa12.63□□□□□ -0.39
BRCA2-204ENST00000530893 KHDC1LQ5JSQ8 128 aa12.63□□□□□ -0.39
BRCA2-204ENST00000530893 C20orf203Q8NBC4 194 aa12.63□□□□□ -0.39
BRCA2-204ENST00000530893 K7ERU9 68 aa12.62□□□□□ -0.39
BRCA2-204ENST00000530893 M0R2P5 195 aa12.62□□□□□ -0.39
BRCA2-204ENST00000530893 ZNF415Q09FC8 603 aa12.62□□□□□ -0.39
BRCA2-204ENST00000530893 DEFB114Q30KQ6 69 aa12.62□□□□□ -0.39
BRCA2-204ENST00000530893 C12orf74Q32Q52 190 aa12.62□□□□□ -0.39
BRCA2-204ENST00000530893 CLUHP3Q96NS8 147 aa12.62□□□□□ -0.39
BRCA2-204ENST00000530893 MAP6D1Q9H9H5 199 aa12.62□□□□□ -0.39
BRCA2-204ENST00000530893 RBMY1BA6NDE4 496 aaKnown RBP12.62□□□□□ -0.39
BRCA2-204ENST00000530893 RBMY1EA6NEQ0 496 aaKnown RBP12.62□□□□□ -0.39
BRCA2-204ENST00000530893 K7ERJ3 54 aa12.62□□□□□ -0.39
BRCA2-204ENST00000530893 RBMY1DP0C7P1 496 aaKnown RBP12.62□□□□□ -0.39
BRCA2-204ENST00000530893 CD300EQ496F6 205 aaPredicted RBP12.62□□□□□ -0.39
BRCA2-204ENST00000530893 NFE4Q86UQ8 179 aa12.62□□□□□ -0.39
BRCA2-204ENST00000530893 DUX3Q96PT4 197 aa12.62□□□□□ -0.39
BRCA2-204ENST00000530893 P0DMU3 169 aa12.61□□□□□ -0.39
BRCA2-204ENST00000530893 FAM231AP0DMU4 169 aa12.61□□□□□ -0.39
BRCA2-204ENST00000530893 FAM231CP0DMU5 169 aa12.61□□□□□ -0.39
BRCA2-204ENST00000530893 SCGB1D4Q6XE38 83 aa12.61□□□□□ -0.39
BRCA2-204ENST00000530893 Q6ZSV7 163 aa12.61□□□□□ -0.39
BRCA2-204ENST00000530893 RAX2Q96IS3 184 aa12.61□□□□□ -0.39
BRCA2-204ENST00000530893 TEX15Q9BXT5 2789 aa12.61□□□□□ -0.39
BRCA2-204ENST00000530893 TRAV25A0A0B4J276 109 aa12.61□□□□□ -0.39
BRCA2-204ENST00000530893 TMEM238LA0A1B0GVL6 79 aa12.61□□□□□ -0.39
BRCA2-204ENST00000530893 A6NJY4 79 aa12.61□□□□□ -0.39
BRCA2-204ENST00000530893 SORL1Q92673 2214 aa12.6□□□□□ -0.39
BRCA2-204ENST00000530893 IGLL5B9A064 214 aa12.6□□□□□ -0.39
BRCA2-204ENST00000530893 ZNRF2Q8NHG8 242 aa12.59□□□□□ -0.39
BRCA2-204ENST00000530893 ABCA12Q86UK0 2595 aa12.59□□□□□ -0.39
BRCA2-204ENST00000530893 HTN1P15515 57 aa12.59□□□□□ -0.39
BRCA2-204ENST00000530893 TMEM170BQ5T4T1 132 aa12.59□□□□□ -0.39
BRCA2-204ENST00000530893 DEFB104AQ8WTQ1 72 aa12.59□□□□□ -0.39
BRCA2-204ENST00000530893 SPXQ9BT56 116 aa12.59□□□□□ -0.39
BRCA2-204ENST00000530893 PYGO1Q9Y3Y4 419 aa12.59□□□□□ -0.39
BRCA2-204ENST00000530893 RHODO00212 210 aa12.58□□□□□ -0.4
BRCA2-204ENST00000530893 INSP01308 110 aa12.58□□□□□ -0.4
BRCA2-204ENST00000530893 CRYBA4P53673 196 aa12.58□□□□□ -0.4
BRCA2-204ENST00000530893 ZNF479Q96JC4 524 aa12.58□□□□□ -0.4
BRCA2-204ENST00000530893 DNAJC9-AS1A6NH13 148 aa12.57□□□□□ -0.4
BRCA2-204ENST00000530893 EMP1P54849 157 aa12.57□□□□□ -0.4
BRCA2-204ENST00000530893 FHL3Q13643 280 aa12.57□□□□□ -0.4
BRCA2-204ENST00000530893 TNFRSF18Q9Y5U5 241 aa12.57□□□□□ -0.4
BRCA2-204ENST00000530893 SRSF9Q13242 221 aaKnown RBP eCLIP12.56□□□□□ -0.4
BRCA2-204ENST00000530893 LINC01587Q99440 93 aa12.56□□□□□ -0.4
BRCA2-204ENST00000530893 SPANXB1Q9NS25 103 aaPredicted RBP12.56□□□□□ -0.4
BRCA2-204ENST00000530893 A0A0J9YY99 117 aa12.55□□□□□ -0.4
BRCA2-204ENST00000530893 RRN3P1Q2M238 152 aa12.55□□□□□ -0.4
BRCA2-204ENST00000530893 C11orf72Q8NBR9 251 aa12.55□□□□□ -0.4
BRCA2-204ENST00000530893 WFDC11Q8NEX6 87 aa12.55□□□□□ -0.4
BRCA2-204ENST00000530893 PLEKHB2Q96CS7 222 aa12.55□□□□□ -0.4
BRCA2-204ENST00000530893 VCX2Q9H322 139 aa12.55□□□□□ -0.4
BRCA2-204ENST00000530893 IGLV4-3A0A075B6K6 122 aa12.55□□□□□ -0.4
BRCA2-204ENST00000530893 BEAN1Q3B7T3 259 aa12.55□□□□□ -0.4
BRCA2-204ENST00000530893 J3QQQ9 107 aa12.54□□□□□ -0.4
BRCA2-204ENST00000530893 CFAP126Q5VTH2 177 aa12.54□□□□□ -0.4
BRCA2-204ENST00000530893 DNAJC30Q96LL9 226 aa12.54□□□□□ -0.4
BRCA2-204ENST00000530893 APCP25054 2843 aa12.54□□□□□ -0.4
BRCA2-204ENST00000530893 TMEM223A0PJW6 202 aa12.54□□□□□ -0.4
BRCA2-204ENST00000530893 RNF151Q2KHN1 245 aa12.54□□□□□ -0.4
BRCA2-204ENST00000530893 MYO9AB2RTY4 2548 aa12.53□□□□□ -0.4
BRCA2-204ENST00000530893 LEPROTO15243 131 aa12.53□□□□□ -0.4
BRCA2-204ENST00000530893 LGALS3P17931 250 aaKnown RBP12.53□□□□□ -0.4
BRCA2-204ENST00000530893 UBE2D1P51668 147 aa12.53□□□□□ -0.4
BRCA2-204ENST00000530893 SLC25A29Q8N8R3 303 aa12.53□□□□□ -0.4
BRCA2-204ENST00000530893 IGHV3-73A0A0B4J1V6 119 aa12.52□□□□□ -0.4
BRCA2-204ENST00000530893 AMELXQ99217 191 aa12.52□□□□□ -0.4
BRCA2-204ENST00000530893 OPRPNQ99935 248 aaPredicted RBP12.52□□□□□ -0.4
BRCA2-204ENST00000530893 F8W1H4 67 aa12.52□□□□□ -0.41
BRCA2-204ENST00000530893 IGHV3-53P01767 116 aa12.52□□□□□ -0.41
BRCA2-204ENST00000530893 TSPEAR-AS2P59090 65 aa12.52□□□□□ -0.41
BRCA2-204ENST00000530893 ODF3L2Q3SX64 289 aa12.52□□□□□ -0.41
BRCA2-204ENST00000530893 CCL24O00175 119 aa12.51□□□□□ -0.41
BRCA2-204ENST00000530893 CD28P10747 220 aa12.51□□□□□ -0.41
BRCA2-204ENST00000530893 ZNF22P17026 224 aaPredicted RBP12.51□□□□□ -0.41
BRCA2-204ENST00000530893 PROK1P58294 105 aa12.51□□□□□ -0.41
BRCA2-204ENST00000530893 STHQ8IWL8 128 aa12.51□□□□□ -0.41
BRCA2-204ENST00000530893 VPS25Q9BRG1 176 aa12.51□□□□□ -0.41
BRCA2-204ENST00000530893 RS1O15537 224 aa12.5□□□□□ -0.41
BRCA2-204ENST00000530893 SPANXA1Q9NS26 97 aa12.5□□□□□ -0.41
BRCA2-204ENST00000530893 NACAE9PAV3 2078 aa12.5□□□□□ -0.41
BRCA2-204ENST00000530893 ZNF469Q96JG9 3925 aaPredicted RBP12.5□□□□□ -0.41
BRCA2-204ENST00000530893 CMC4P56277 68 aaPredicted RBP12.49□□□□□ -0.41
BRCA2-204ENST00000530893 MRPS36P82909 103 aaKnown RBP12.49□□□□□ -0.41
BRCA2-204ENST00000530893 ESM1Q9NQ30 184 aa12.49□□□□□ -0.41
BRCA2-204ENST00000530893 TSSC4Q9Y5U2 329 aaPredicted RBP12.49□□□□□ -0.41
BRCA2-204ENST00000530893 ITPR3Q14573 2671 aa12.49□□□□□ -0.41
BRCA2-204ENST00000530893 G3V4G9 280 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 370.8 ms