RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 GATA1P15976 413 aaPredicted RBP8.68□□□□□ -1.02
USP35-207ENST00000530546 H3BVH4 76 aa8.68□□□□□ -1.02
USP35-207ENST00000530546 OVOL1O14753 267 aa8.68□□□□□ -1.02
USP35-207ENST00000530546 TCL1BO95988 128 aa8.68□□□□□ -1.02
USP35-207ENST00000530546 RNASE4P34096 147 aaKnown RBP8.68□□□□□ -1.02
USP35-207ENST00000530546 PSMG3-AS1Q96PY0 264 aa8.68□□□□□ -1.02
USP35-207ENST00000530546 CD7P09564 240 aa8.67□□□□□ -1.02
USP35-207ENST00000530546 Q6YL49 198 aa8.67□□□□□ -1.02
USP35-207ENST00000530546 LINC00477Q96M19 166 aa8.67□□□□□ -1.02
USP35-207ENST00000530546 SONP18583 2426 aaKnown RBP8.67□□□□□ -1.02
USP35-207ENST00000530546 CCDC179H3BU77 68 aa8.67□□□□□ -1.02
USP35-207ENST00000530546 SCGB1C2P0DMR2 95 aa8.67□□□□□ -1.02
USP35-207ENST00000530546 SPANXN1Q5VSR9 72 aa8.67□□□□□ -1.02
USP35-207ENST00000530546 SYNJ2BPP57105 145 aa8.67□□□□□ -1.02
USP35-207ENST00000530546 NDUFA11Q86Y39 141 aa8.67□□□□□ -1.02
USP35-207ENST00000530546 ZFAND2AQ8N6M9 145 aa8.67□□□□□ -1.02
USP35-207ENST00000530546 KIR2DL4Q99706 377 aa8.67□□□□□ -1.02
USP35-207ENST00000530546 CR1P17927 2039 aa8.66□□□□□ -1.02
USP35-207ENST00000530546 APCP25054 2843 aa8.66□□□□□ -1.02
USP35-207ENST00000530546 SRSF9Q13242 221 aaKnown RBP eCLIP8.66□□□□□ -1.02
USP35-207ENST00000530546 HIST2H2BDQ6DRA6 164 aa8.66□□□□□ -1.02
USP35-207ENST00000530546 ZNF702PQ9H963 129 aa8.66□□□□□ -1.02
USP35-207ENST00000530546 FSHBP01225 129 aa8.66□□□□□ -1.02
USP35-207ENST00000530546 TRAV26-2A0A0B4J265 109 aa8.65□□□□□ -1.02
USP35-207ENST00000530546 ZNF815PA8K554 130 aa8.65□□□□□ -1.02
USP35-207ENST00000530546 IGKV3-20P01619 116 aa8.65□□□□□ -1.02
USP35-207ENST00000530546 S100A4P26447 101 aaKnown RBP8.65□□□□□ -1.02
USP35-207ENST00000530546 SCGB1D4Q6XE38 83 aa8.65□□□□□ -1.02
USP35-207ENST00000530546 IGHV4OR15-8A0A075B7B6 117 aa8.65□□□□□ -1.02
USP35-207ENST00000530546 A0A087WW49 117 aa8.65□□□□□ -1.02
USP35-207ENST00000530546 M0R381 172 aa8.65□□□□□ -1.02
USP35-207ENST00000530546 TRAV21A0A0B4J279 112 aa8.64□□□□□ -1.03
USP35-207ENST00000530546 NRACQ8N912 160 aa8.64□□□□□ -1.03
USP35-207ENST00000530546 PRADC1Q9BSG0 188 aa8.64□□□□□ -1.03
USP35-207ENST00000530546 MYO9AB2RTY4 2548 aa8.64□□□□□ -1.03
USP35-207ENST00000530546 NBPF19A0A087WUL8 3843 aa8.64□□□□□ -1.03
USP35-207ENST00000530546 TRAV4A0A0B4J268 109 aa8.64□□□□□ -1.03
USP35-207ENST00000530546 K7EMT4 169 aa8.64□□□□□ -1.03
USP35-207ENST00000530546 SLC25A20O43772 301 aa8.64□□□□□ -1.03
USP35-207ENST00000530546 DEFB136Q30KP8 78 aa8.64□□□□□ -1.03
USP35-207ENST00000530546 ANXA2RQ3ZCQ2 193 aa8.64□□□□□ -1.03
USP35-207ENST00000530546 C18orf65Q6ZTR6 163 aa8.64□□□□□ -1.03
USP35-207ENST00000530546 CITED2Q99967 270 aaPredicted RBP8.64□□□□□ -1.03
USP35-207ENST00000530546 GNRH2O43555 120 aa8.64□□□□□ -1.03
USP35-207ENST00000530546 SFTA2Q6UW10 78 aa8.64□□□□□ -1.03
USP35-207ENST00000530546 C10orf126Q8N4M7 172 aa8.64□□□□□ -1.03
USP35-207ENST00000530546 NEXN-AS1Q8NBZ9 246 aa8.64□□□□□ -1.03
USP35-207ENST00000530546 WFDC11Q8NEX6 87 aa8.64□□□□□ -1.03
USP35-207ENST00000530546 LENEPQ9Y5L5 61 aa8.64□□□□□ -1.03
USP35-207ENST00000530546 CHD6Q8TD26 2715 aa8.63□□□□□ -1.03
USP35-207ENST00000530546 KHDC1LQ5JSQ8 128 aa8.63□□□□□ -1.03
USP35-207ENST00000530546 KRTAP1-3Q8IUG1 177 aa8.63□□□□□ -1.03
USP35-207ENST00000530546 ZNF580Q9UK33 172 aa8.63□□□□□ -1.03
USP35-207ENST00000530546 ORMDL2Q53FV1 153 aa8.63□□□□□ -1.03
USP35-207ENST00000530546 LRRC75A-AS1Q8N1F1 130 aa8.63□□□□□ -1.03
USP35-207ENST00000530546 HOXD3P31249 432 aaPredicted RBP8.62□□□□□ -1.03
USP35-207ENST00000530546 DCANP1Q8TF63 244 aa8.62□□□□□ -1.03
USP35-207ENST00000530546 LINC01600Q96MT4 127 aa8.62□□□□□ -1.03
USP35-207ENST00000530546 DUX3Q96PT4 197 aa8.62□□□□□ -1.03
USP35-207ENST00000530546 TMEM126AQ9H061 195 aa8.62□□□□□ -1.03
USP35-207ENST00000530546 SORL1Q92673 2214 aa8.62□□□□□ -1.03
USP35-207ENST00000530546 FAM159AQ6UWV7 190 aa8.62□□□□□ -1.03
USP35-207ENST00000530546 TOMM6Q96B49 74 aa8.62□□□□□ -1.03
USP35-207ENST00000530546 TENM4Q6N022 2769 aa8.61□□□□□ -1.03
USP35-207ENST00000530546 ELANEP08246 267 aa8.61□□□□□ -1.03
USP35-207ENST00000530546 PLEKHB2Q96CS7 222 aa8.61□□□□□ -1.03
USP35-207ENST00000530546 SCGB3A1Q96QR1 104 aa8.61□□□□□ -1.03
USP35-207ENST00000530546 MDFICQ9P1T7 246 aa8.61□□□□□ -1.03
USP35-207ENST00000530546 PHLDA3Q9Y5J5 127 aa8.61□□□□□ -1.03
USP35-207ENST00000530546 ITPR3Q14573 2671 aa8.61□□□□□ -1.03
USP35-207ENST00000530546 TRAV25A0A0B4J276 109 aa8.61□□□□□ -1.03
USP35-207ENST00000530546 TMEM89A2RUT3 159 aa8.61□□□□□ -1.03
USP35-207ENST00000530546 PRO1854Q9UHT4 67 aa8.61□□□□□ -1.03
USP35-207ENST00000530546 ZNF469Q96JG9 3925 aaPredicted RBP8.61□□□□□ -1.03
USP35-207ENST00000530546 CRLF1O75462 422 aa8.61□□□□□ -1.03
USP35-207ENST00000530546 SLURP1P55000 103 aa8.61□□□□□ -1.03
USP35-207ENST00000530546 MRPL23Q16540 153 aaKnown RBP8.61□□□□□ -1.03
USP35-207ENST00000530546 SMIM2Q9BVW6 85 aa8.61□□□□□ -1.03
USP35-207ENST00000530546 TRAV12-3A0A0B4J271 114 aa8.6□□□□□ -1.03
USP35-207ENST00000530546 CFC1BP0CG36 223 aa8.6□□□□□ -1.03
USP35-207ENST00000530546 CFC1P0CG37 223 aa8.6□□□□□ -1.03
USP35-207ENST00000530546 C5orf47Q569G3 176 aa8.6□□□□□ -1.03
USP35-207ENST00000530546 C14orf178Q8N769 122 aaPredicted RBP8.6□□□□□ -1.03
USP35-207ENST00000530546 FAM19A4Q96LR4 140 aa8.6□□□□□ -1.03
USP35-207ENST00000530546 TRAV12-2A0A075B6T6 113 aa8.6□□□□□ -1.03
USP35-207ENST00000530546 C9JAW5 83 aa8.6□□□□□ -1.03
USP35-207ENST00000530546 MGPP08493 103 aa8.6□□□□□ -1.03
USP35-207ENST00000530546 RPL13AP40429 203 aaKnown RBP8.6□□□□□ -1.03
USP35-207ENST00000530546 UBE2E2Q96LR5 201 aa8.6□□□□□ -1.03
USP35-207ENST00000530546 A0A0J9YY99 117 aa8.59□□□□□ -1.03
USP35-207ENST00000530546 MEIG1Q5JSS6 88 aa8.59□□□□□ -1.03
USP35-207ENST00000530546 IGHV3-30P01768 117 aa8.59□□□□□ -1.03
USP35-207ENST00000530546 IGHV3-30-5P0DP03 117 aa8.59□□□□□ -1.03
USP35-207ENST00000530546 FLNAP21333 2647 aaKnown RBP8.58□□□□□ -1.04
USP35-207ENST00000530546 IGHV4-4A0A075B6R2 117 aa8.58□□□□□ -1.04
USP35-207ENST00000530546 TRAV8-4A0A0B4J246 113 aa8.58□□□□□ -1.04
USP35-207ENST00000530546 P0DMU3 169 aa8.58□□□□□ -1.04
USP35-207ENST00000530546 FAM231AP0DMU4 169 aa8.58□□□□□ -1.04
USP35-207ENST00000530546 FAM231CP0DMU5 169 aa8.58□□□□□ -1.04
USP35-207ENST00000530546 HERVK_113P61574 105 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms