RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 PDE6DO43924 150 aa7.44□□□□□ -1.22
SF3B2-208ENST00000529994 MGPP08493 103 aa7.44□□□□□ -1.22
SF3B2-208ENST00000529994 CXCL1P09341 107 aa7.44□□□□□ -1.22
SF3B2-208ENST00000529994 RPL36AP83881 106 aaKnown RBP7.44□□□□□ -1.22
SF3B2-208ENST00000529994 DAZ4Q86SG3 579 aaKnown RBP7.44□□□□□ -1.22
SF3B2-208ENST00000529994 BAALCQ8WXS3 180 aa7.44□□□□□ -1.22
SF3B2-208ENST00000529994 RPL36ALQ969Q0 106 aaKnown RBP7.44□□□□□ -1.22
SF3B2-208ENST00000529994 CHAC1Q9BUX1 264 aa7.44□□□□□ -1.22
SF3B2-208ENST00000529994 TM2D2Q9BX73 214 aa7.44□□□□□ -1.22
SF3B2-208ENST00000529994 DAZ3Q9NR90 486 aaKnown RBP7.44□□□□□ -1.22
SF3B2-208ENST00000529994 SNAI2O43623 268 aa7.43□□□□□ -1.22
SF3B2-208ENST00000529994 IGLV2-8P01709 118 aa7.43□□□□□ -1.22
SF3B2-208ENST00000529994 SMIM17P0DL12 118 aa7.43□□□□□ -1.22
SF3B2-208ENST00000529994 NKX2-5P52952 324 aaPredicted RBP7.43□□□□□ -1.22
SF3B2-208ENST00000529994 FER1L6-AS1Q8NA97 138 aa7.43□□□□□ -1.22
SF3B2-208ENST00000529994 CIRBP-AS1Q8TBR5 109 aa7.43□□□□□ -1.22
SF3B2-208ENST00000529994 VAX2Q9UIW0 290 aa7.43□□□□□ -1.22
SF3B2-208ENST00000529994 URGCP-MRPS24S4R325 110 aa7.43□□□□□ -1.22
SF3B2-208ENST00000529994 A0A087WWC5 75 aa7.42□□□□□ -1.22
SF3B2-208ENST00000529994 P01737 135 aa7.42□□□□□ -1.22
SF3B2-208ENST00000529994 OR5AL1P0C617 328 aa7.42□□□□□ -1.22
SF3B2-208ENST00000529994 CEBPGP53567 150 aa7.42□□□□□ -1.22
SF3B2-208ENST00000529994 RAB4BP61018 213 aa7.42□□□□□ -1.22
SF3B2-208ENST00000529994 LAGE3Q14657 143 aa7.42□□□□□ -1.22
SF3B2-208ENST00000529994 NEXN-AS1Q8NBZ9 246 aa7.42□□□□□ -1.22
SF3B2-208ENST00000529994 AP1S3Q96PC3 154 aa7.42□□□□□ -1.22
SF3B2-208ENST00000529994 BOLA1Q9Y3E2 137 aa7.42□□□□□ -1.22
SF3B2-208ENST00000529994 RNF213Q63HN8 5207 aa7.41□□□□□ -1.22
SF3B2-208ENST00000529994 TRBV20OR9-2A0A075B6H5 130 aa7.41□□□□□ -1.22
SF3B2-208ENST00000529994 TRBV7-3A0A075B6L6 115 aa7.41□□□□□ -1.22
SF3B2-208ENST00000529994 TRBV10-1A0A0K0K1A3 114 aa7.41□□□□□ -1.22
SF3B2-208ENST00000529994 A0A1B0GVG6 124 aa7.41□□□□□ -1.22
SF3B2-208ENST00000529994 HNRNPA3P51991 378 aaKnown RBP7.41□□□□□ -1.22
SF3B2-208ENST00000529994 RPS20P60866 119 aaKnown RBP7.41□□□□□ -1.22
SF3B2-208ENST00000529994 UBE2D3P61077 147 aa7.41□□□□□ -1.22
SF3B2-208ENST00000529994 UBE2D2P62837 147 aa7.41□□□□□ -1.22
SF3B2-208ENST00000529994 KCNIP4Q6PIL6 250 aa7.41□□□□□ -1.22
SF3B2-208ENST00000529994 SSBP4Q9BWG4 385 aaPredicted RBP7.41□□□□□ -1.22
SF3B2-208ENST00000529994 A0A087WX48 190 aa7.4□□□□□ -1.22
SF3B2-208ENST00000529994 C19orf71A6NCJ1 209 aa7.4□□□□□ -1.22
SF3B2-208ENST00000529994 TMEM262E9PQX1 116 aa7.4□□□□□ -1.22
SF3B2-208ENST00000529994 DNAJC30Q96LL9 226 aa7.4□□□□□ -1.22
SF3B2-208ENST00000529994 KLK12Q9UKR0 248 aa7.4□□□□□ -1.22
SF3B2-208ENST00000529994 IGKV2D-24A0A075B6R9 120 aa7.39□□□□□ -1.23
SF3B2-208ENST00000529994 TRAV8-3A0A0A6YYJ7 113 aa7.39□□□□□ -1.23
SF3B2-208ENST00000529994 XKRY2A2RUG3 117 aa7.39□□□□□ -1.23
SF3B2-208ENST00000529994 IGLC6P0CF74 106 aa7.39□□□□□ -1.23
SF3B2-208ENST00000529994 TAGLN2P37802 199 aaKnown RBP7.39□□□□□ -1.23
SF3B2-208ENST00000529994 BLOC1S1P78537 153 aa7.39□□□□□ -1.23
SF3B2-208ENST00000529994 TOR2AQ5JU69 321 aa7.39□□□□□ -1.23
SF3B2-208ENST00000529994 LYZL1Q6UWQ5 148 aa7.39□□□□□ -1.23
SF3B2-208ENST00000529994 NIT1Q86X76 327 aa7.39□□□□□ -1.23
SF3B2-208ENST00000529994 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.39□□□□□ -1.23
SF3B2-208ENST00000529994 UBE2WQ96B02 151 aa7.39□□□□□ -1.23
SF3B2-208ENST00000529994 SMIM12Q96EX1 92 aa7.39□□□□□ -1.23
SF3B2-208ENST00000529994 RNASE7Q9H1E1 156 aaKnown RBP7.39□□□□□ -1.23
SF3B2-208ENST00000529994 BIN3Q9NQY0 253 aa7.39□□□□□ -1.23
SF3B2-208ENST00000529994 RPL37AP61513 92 aaKnown RBP7.38□□□□□ -1.23
SF3B2-208ENST00000529994 CACNG7P62955 275 aa7.38□□□□□ -1.23
SF3B2-208ENST00000529994 NUDT10Q8NFP7 164 aa7.38□□□□□ -1.23
SF3B2-208ENST00000529994 OR10G8Q8NGN5 311 aa7.38□□□□□ -1.23
SF3B2-208ENST00000529994 NUDT11Q96G61 164 aa7.38□□□□□ -1.23
SF3B2-208ENST00000529994 CHCHD5Q9BSY4 110 aa7.38□□□□□ -1.23
SF3B2-208ENST00000529994 TRBV6-8A0A0A6YYG3 113 aa7.37□□□□□ -1.23
SF3B2-208ENST00000529994 K7EN84 100 aa7.37□□□□□ -1.23
SF3B2-208ENST00000529994 SUMO4Q6EEV6 95 aa7.37□□□□□ -1.23
SF3B2-208ENST00000529994 C15orf54Q8N8G6 183 aa7.37□□□□□ -1.23
SF3B2-208ENST00000529994 Q8N976 141 aa7.37□□□□□ -1.23
SF3B2-208ENST00000529994 OCC1Q8TAD7 63 aa7.37□□□□□ -1.23
SF3B2-208ENST00000529994 RPP21Q9H633 154 aaKnown RBP7.37□□□□□ -1.23
SF3B2-208ENST00000529994 KIF25-AS1Q9Y6Z4 181 aa7.37□□□□□ -1.23
SF3B2-208ENST00000529994 LRP2P98164 4655 aa7.36□□□□□ -1.23
SF3B2-208ENST00000529994 CRPP02741 224 aa7.36□□□□□ -1.23
SF3B2-208ENST00000529994 TRGC1P0CF51 173 aa7.36□□□□□ -1.23
SF3B2-208ENST00000529994 MT1HL1P0DM35 61 aa7.36□□□□□ -1.23
SF3B2-208ENST00000529994 GAGE6Q13070 117 aa7.36□□□□□ -1.23
SF3B2-208ENST00000529994 TWIST1Q15672 202 aa7.36□□□□□ -1.23
SF3B2-208ENST00000529994 MPV17L2Q567V2 206 aa7.36□□□□□ -1.23
SF3B2-208ENST00000529994 CLPSL2Q6UWE3 100 aa7.36□□□□□ -1.23
SF3B2-208ENST00000529994 RMI2Q96E14 147 aa7.36□□□□□ -1.23
SF3B2-208ENST00000529994 EIF5A2Q9GZV4 153 aaKnown RBP7.36□□□□□ -1.23
SF3B2-208ENST00000529994 F2Z2F3 143 aa7.35□□□□□ -1.23
SF3B2-208ENST00000529994 H7C1H1 209 aa7.35□□□□□ -1.23
SF3B2-208ENST00000529994 GATCO43716 136 aaKnown RBP7.35□□□□□ -1.23
SF3B2-208ENST00000529994 ANGP03950 147 aaKnown RBP7.35□□□□□ -1.23
SF3B2-208ENST00000529994 NTF3P20783 257 aa7.35□□□□□ -1.23
SF3B2-208ENST00000529994 ELOBQ15370 118 aa7.35□□□□□ -1.23
SF3B2-208ENST00000529994 DPH3P1Q9H4G8 78 aa7.35□□□□□ -1.23
SF3B2-208ENST00000529994 COX11Q9Y6N1 276 aa7.35□□□□□ -1.23
SF3B2-208ENST00000529994 TMEM250H0YL14 139 aa7.34□□□□□ -1.23
SF3B2-208ENST00000529994 M0QY20 66 aa7.34□□□□□ -1.23
SF3B2-208ENST00000529994 CTRLP40313 264 aa7.34□□□□□ -1.23
SF3B2-208ENST00000529994 NTM-AS1Q6ZSK4 140 aa7.34□□□□□ -1.23
SF3B2-208ENST00000529994 CHCHD7Q9BUK0 85 aa7.34□□□□□ -1.23
SF3B2-208ENST00000529994 TRBV25-1A0A075B6N4 114 aa7.33□□□□□ -1.24
SF3B2-208ENST00000529994 TRAV26-2A0A0B4J265 109 aa7.33□□□□□ -1.24
SF3B2-208ENST00000529994 RASL11AQ6T310 242 aa7.33□□□□□ -1.24
SF3B2-208ENST00000529994 ATRAIDQ6UW56 229 aa7.33□□□□□ -1.24
SF3B2-208ENST00000529994 PGLYRP4Q96LB8 373 aa7.33□□□□□ -1.24
SF3B2-208ENST00000529994 SMIM7Q9BQ49 75 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms