RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 AKAP9Q99996 3911 aa5.52□□□□□ -1.53
C11orf54-207ENST00000528288 NDUFS8O00217 210 aa5.52□□□□□ -1.53
C11orf54-207ENST00000528288 SNRPD3P62318 126 aaKnown RBP5.52□□□□□ -1.53
C11orf54-207ENST00000528288 APRG1Q8IVJ8 170 aa5.52□□□□□ -1.53
C11orf54-207ENST00000528288 ATP6V0BQ99437 205 aa5.52□□□□□ -1.53
C11orf54-207ENST00000528288 NBPF19A0A087WUL8 3843 aa5.51□□□□□ -1.53
C11orf54-207ENST00000528288 H7C2G1 150 aa5.51□□□□□ -1.53
C11orf54-207ENST00000528288 VCYO14598 125 aa5.51□□□□□ -1.53
C11orf54-207ENST00000528288 HOXA3O43365 443 aaPredicted RBP5.51□□□□□ -1.53
C11orf54-207ENST00000528288 RRN3P1Q2M238 152 aa5.51□□□□□ -1.53
C11orf54-207ENST00000528288 GTSF1LQ9H1H1 148 aa5.51□□□□□ -1.53
C11orf54-207ENST00000528288 MTORP42345 2549 aa5.51□□□□□ -1.53
C11orf54-207ENST00000528288 DEFB131AP59861 70 aa5.51□□□□□ -1.53
C11orf54-207ENST00000528288 PMVKQ15126 192 aa5.51□□□□□ -1.53
C11orf54-207ENST00000528288 ZNF418Q8TF45 676 aaPredicted RBP5.51□□□□□ -1.53
C11orf54-207ENST00000528288 IGHV1OR15-1A0A075B7D0 117 aa5.5□□□□□ -1.53
C11orf54-207ENST00000528288 K7EQG2 157 aa5.5□□□□□ -1.53
C11orf54-207ENST00000528288 M0QY20 66 aa5.5□□□□□ -1.53
C11orf54-207ENST00000528288 PSMB2P49721 201 aa5.5□□□□□ -1.53
C11orf54-207ENST00000528288 TCTEX1D4Q5JR98 221 aa5.5□□□□□ -1.53
C11orf54-207ENST00000528288 PTH2Q96A98 100 aa5.5□□□□□ -1.53
C11orf54-207ENST00000528288 K7EMT4 169 aa5.5□□□□□ -1.53
C11orf54-207ENST00000528288 NXPH4O95158 308 aa5.5□□□□□ -1.53
C11orf54-207ENST00000528288 MED14OSP0DP75 135 aa5.5□□□□□ -1.53
C11orf54-207ENST00000528288 COX6B1P14854 86 aa5.5□□□□□ -1.53
C11orf54-207ENST00000528288 LINC01356Q8N9X3 169 aa5.5□□□□□ -1.53
C11orf54-207ENST00000528288 TSSC4Q9Y5U2 329 aaPredicted RBP5.5□□□□□ -1.53
C11orf54-207ENST00000528288 IGHV3-38A0A0C4DH36 116 aa5.49□□□□□ -1.53
C11orf54-207ENST00000528288 A0A0J9YXV3 536 aa5.49□□□□□ -1.53
C11orf54-207ENST00000528288 A0A1B0GWB2 263 aa5.49□□□□□ -1.53
C11orf54-207ENST00000528288 GAGE13Q4V321 117 aa5.49□□□□□ -1.53
C11orf54-207ENST00000528288 C9orf85Q96MD7 179 aa5.49□□□□□ -1.53
C11orf54-207ENST00000528288 SPANXB1Q9NS25 103 aaPredicted RBP5.49□□□□□ -1.53
C11orf54-207ENST00000528288 IGHV3OR16-12A0A075B7B8 117 aa5.49□□□□□ -1.53
C11orf54-207ENST00000528288 A8MZ25 164 aa5.49□□□□□ -1.53
C11orf54-207ENST00000528288 Q6ZSN1 163 aa5.49□□□□□ -1.53
C11orf54-207ENST00000528288 RAX2Q96IS3 184 aa5.49□□□□□ -1.53
C11orf54-207ENST00000528288 A0A0J9YY99 117 aa5.48□□□□□ -1.53
C11orf54-207ENST00000528288 TSPAN13O95857 204 aa5.48□□□□□ -1.53
C11orf54-207ENST00000528288 NPC2P61916 151 aa5.48□□□□□ -1.53
C11orf54-207ENST00000528288 SMAGPQ0VAQ4 97 aa5.48□□□□□ -1.53
C11orf54-207ENST00000528288 TAL2Q16559 108 aa5.48□□□□□ -1.53
C11orf54-207ENST00000528288 SPAG8Q99932 426 aaPredicted RBP5.48□□□□□ -1.53
C11orf54-207ENST00000528288 A0A1W2PRX2 142 aa5.48□□□□□ -1.53
C11orf54-207ENST00000528288 LGALS9O00182 355 aa5.48□□□□□ -1.53
C11orf54-207ENST00000528288 PPP1R17O96001 155 aa5.48□□□□□ -1.53
C11orf54-207ENST00000528288 SYT8Q8NBV8 401 aa5.48□□□□□ -1.53
C11orf54-207ENST00000528288 SPXQ9BT56 116 aa5.48□□□□□ -1.53
C11orf54-207ENST00000528288 ZNF702PQ9H963 129 aa5.48□□□□□ -1.53
C11orf54-207ENST00000528288 TRAV2A0A0B4J234 112 aa5.48□□□□□ -1.53
C11orf54-207ENST00000528288 RBMY1BA6NDE4 496 aaKnown RBP5.48□□□□□ -1.53
C11orf54-207ENST00000528288 RBMY1EA6NEQ0 496 aaKnown RBP5.48□□□□□ -1.53
C11orf54-207ENST00000528288 RBMY1DP0C7P1 496 aaKnown RBP5.48□□□□□ -1.53
C11orf54-207ENST00000528288 TRBV27A0A0K0K1C4 114 aa5.48□□□□□ -1.53
C11orf54-207ENST00000528288 HERVK_113P61574 105 aa5.48□□□□□ -1.53
C11orf54-207ENST00000528288 POM121L12Q8N7R1 296 aa5.48□□□□□ -1.53
C11orf54-207ENST00000528288 TRAV8-3A0A0A6YYJ7 113 aa5.47□□□□□ -1.53
C11orf54-207ENST00000528288 J3QQQ9 107 aa5.47□□□□□ -1.53
C11orf54-207ENST00000528288 BRI3O95415 125 aa5.47□□□□□ -1.53
C11orf54-207ENST00000528288 LGALS3P17931 250 aaKnown RBP5.47□□□□□ -1.53
C11orf54-207ENST00000528288 BBC3Q96PG8 261 aaPredicted RBP5.47□□□□□ -1.53
C11orf54-207ENST00000528288 VPREB3Q9UKI3 123 aa5.47□□□□□ -1.53
C11orf54-207ENST00000528288 TMEM61Q8N0U2 210 aa5.47□□□□□ -1.53
C11orf54-207ENST00000528288 APCP25054 2843 aa5.47□□□□□ -1.53
C11orf54-207ENST00000528288 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.47□□□□□ -1.53
C11orf54-207ENST00000528288 TRBV7-9A0A0J9YWB2 115 aa5.47□□□□□ -1.53
C11orf54-207ENST00000528288 IGKV2-29A2NJV5 120 aaPredicted RBP5.47□□□□□ -1.53
C11orf54-207ENST00000528288 ITPR3Q14573 2671 aa5.47□□□□□ -1.53
C11orf54-207ENST00000528288 FLNAP21333 2647 aaKnown RBP5.46□□□□□ -1.53
C11orf54-207ENST00000528288 CFC1BP0CG36 223 aa5.46□□□□□ -1.53
C11orf54-207ENST00000528288 CFC1P0CG37 223 aa5.46□□□□□ -1.53
C11orf54-207ENST00000528288 SMCPP49901 116 aaPredicted RBP5.46□□□□□ -1.53
C11orf54-207ENST00000528288 HIST2H2BCQ6DN03 193 aa5.46□□□□□ -1.53
C11orf54-207ENST00000528288 PRO0461Q9UI25 63 aa5.46□□□□□ -1.53
C11orf54-207ENST00000528288 A0A096LNT2 108 aa5.46□□□□□ -1.54
C11orf54-207ENST00000528288 SCGB1C2P0DMR2 95 aa5.46□□□□□ -1.54
C11orf54-207ENST00000528288 CD28P10747 220 aa5.46□□□□□ -1.54
C11orf54-207ENST00000528288 AZU1P20160 251 aa5.46□□□□□ -1.54
C11orf54-207ENST00000528288 TRPT1Q86TN4 253 aaKnown RBP5.46□□□□□ -1.54
C11orf54-207ENST00000528288 NDUFA11Q86Y39 141 aa5.46□□□□□ -1.54
C11orf54-207ENST00000528288 C20orf203Q8NBC4 194 aa5.46□□□□□ -1.54
C11orf54-207ENST00000528288 TMEM141Q96I45 108 aa5.46□□□□□ -1.54
C11orf54-207ENST00000528288 VCX2Q9H322 139 aa5.46□□□□□ -1.54
C11orf54-207ENST00000528288 F8W1H4 67 aa5.46□□□□□ -1.54
C11orf54-207ENST00000528288 UBE2E2Q96LR5 201 aa5.46□□□□□ -1.54
C11orf54-207ENST00000528288 AMELXQ99217 191 aa5.46□□□□□ -1.54
C11orf54-207ENST00000528288 TIMM17AQ99595 171 aa5.46□□□□□ -1.54
C11orf54-207ENST00000528288 IGLV4-3A0A075B6K6 122 aa5.45□□□□□ -1.54
C11orf54-207ENST00000528288 I3L3M4 83 aa5.45□□□□□ -1.54
C11orf54-207ENST00000528288 IGHV3-30P01768 117 aa5.45□□□□□ -1.54
C11orf54-207ENST00000528288 IGHV3-30-5P0DP03 117 aa5.45□□□□□ -1.54
C11orf54-207ENST00000528288 IGHV4-31P0DP07 118 aa5.45□□□□□ -1.54
C11orf54-207ENST00000528288 ZNF22P17026 224 aaPredicted RBP5.45□□□□□ -1.54
C11orf54-207ENST00000528288 DLX4Q92988 240 aaPredicted RBP5.45□□□□□ -1.54
C11orf54-207ENST00000528288 XCL2Q9UBD3 114 aa5.45□□□□□ -1.54
C11orf54-207ENST00000528288 A4D1N5 150 aa5.45□□□□□ -1.54
C11orf54-207ENST00000528288 TMEM238C9JI98 176 aa5.45□□□□□ -1.54
C11orf54-207ENST00000528288 EIF4EBP3O60516 100 aaPredicted RBP5.45□□□□□ -1.54
C11orf54-207ENST00000528288 TCL1BO95988 128 aa5.45□□□□□ -1.54
C11orf54-207ENST00000528288 UBE2D1P51668 147 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms