RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 TRBV25-1A0A075B6N4 114 aa3.69□□□□□ -1.82
HMGB1P40-201ENST00000525121 A0A1B0GW15 77 aa3.69□□□□□ -1.82
HMGB1P40-201ENST00000525121 TMEM262E9PQX1 116 aa3.69□□□□□ -1.82
HMGB1P40-201ENST00000525121 PSCAO43653 123 aa3.69□□□□□ -1.82
HMGB1P40-201ENST00000525121 IGHV3-30P01768 117 aa3.69□□□□□ -1.82
HMGB1P40-201ENST00000525121 IGHV3-33P01772 117 aa3.69□□□□□ -1.82
HMGB1P40-201ENST00000525121 MT-ND4LP03901 98 aa3.69□□□□□ -1.82
HMGB1P40-201ENST00000525121 IGHV3-30-3P0DP02 117 aa3.69□□□□□ -1.82
HMGB1P40-201ENST00000525121 IGHV3-30-5P0DP03 117 aa3.69□□□□□ -1.82
HMGB1P40-201ENST00000525121 FOXA3P55318 350 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P40-201ENST00000525121 LINC00315P59091 139 aa3.69□□□□□ -1.82
HMGB1P40-201ENST00000525121 ELOBQ15370 118 aa3.69□□□□□ -1.82
HMGB1P40-201ENST00000525121 COMMD7Q86VX2 200 aa3.69□□□□□ -1.82
HMGB1P40-201ENST00000525121 NEXN-AS1Q8NBZ9 246 aa3.69□□□□□ -1.82
HMGB1P40-201ENST00000525121 FRZBQ92765 325 aa3.69□□□□□ -1.82
HMGB1P40-201ENST00000525121 CHCHD5Q9BSY4 110 aa3.69□□□□□ -1.82
HMGB1P40-201ENST00000525121 NIT2Q9NQR4 276 aa3.69□□□□□ -1.82
HMGB1P40-201ENST00000525121 KIF25-AS1Q9Y6Z4 181 aa3.69□□□□□ -1.82
HMGB1P40-201ENST00000525121 ALMS1Q8TCU4 4167 aa3.68□□□□□ -1.82
HMGB1P40-201ENST00000525121 TRBV6-8A0A0A6YYG3 113 aa3.68□□□□□ -1.82
HMGB1P40-201ENST00000525121 IGHV1-24A0A0C4DH33 117 aa3.68□□□□□ -1.82
HMGB1P40-201ENST00000525121 SMIM27A0A1W2PRY6 76 aa3.68□□□□□ -1.82
HMGB1P40-201ENST00000525121 F8W036 122 aa3.68□□□□□ -1.82
HMGB1P40-201ENST00000525121 M0QY20 66 aa3.68□□□□□ -1.82
HMGB1P40-201ENST00000525121 UBE2L6O14933 153 aa3.68□□□□□ -1.82
HMGB1P40-201ENST00000525121 RTL8CO15255 209 aa3.68□□□□□ -1.82
HMGB1P40-201ENST00000525121 PPP1R17O96001 155 aa3.68□□□□□ -1.82
HMGB1P40-201ENST00000525121 IFITM2Q01629 132 aa3.68□□□□□ -1.82
HMGB1P40-201ENST00000525121 COTL1Q14019 142 aa3.68□□□□□ -1.82
HMGB1P40-201ENST00000525121 LAGE3Q14657 143 aa3.68□□□□□ -1.82
HMGB1P40-201ENST00000525121 NUP35Q8NFH5 326 aa3.68□□□□□ -1.82
HMGB1P40-201ENST00000525121 ANAPC16Q96DE5 110 aa3.68□□□□□ -1.82
HMGB1P40-201ENST00000525121 RMI2Q96E14 147 aa3.68□□□□□ -1.82
HMGB1P40-201ENST00000525121 MRAP2Q96G30 205 aa3.68□□□□□ -1.82
HMGB1P40-201ENST00000525121 CHCHD7Q9BUK0 85 aa3.68□□□□□ -1.82
HMGB1P40-201ENST00000525121 TMEM191AQ9H0A3 160 aa3.68□□□□□ -1.82
HMGB1P40-201ENST00000525121 TRAV8-3A0A0A6YYJ7 113 aa3.67□□□□□ -1.82
HMGB1P40-201ENST00000525121 TRAV26-2A0A0B4J265 109 aa3.67□□□□□ -1.82
HMGB1P40-201ENST00000525121 TMEM218A2RU14 115 aa3.67□□□□□ -1.82
HMGB1P40-201ENST00000525121 CRPP02741 224 aa3.67□□□□□ -1.82
HMGB1P40-201ENST00000525121 AMTP48728 403 aa3.67□□□□□ -1.82
HMGB1P40-201ENST00000525121 CAMPP49913 170 aa3.67□□□□□ -1.82
HMGB1P40-201ENST00000525121 HBBP68871 147 aa3.67□□□□□ -1.82
HMGB1P40-201ENST00000525121 ATP5L2Q7Z4Y8 100 aa3.67□□□□□ -1.82
HMGB1P40-201ENST00000525121 NIT1Q86X76 327 aa3.67□□□□□ -1.82
HMGB1P40-201ENST00000525121 GATD1Q8NB37 220 aa3.67□□□□□ -1.82
HMGB1P40-201ENST00000525121 TMEM243Q9BU79 118 aa3.67□□□□□ -1.82
HMGB1P40-201ENST00000525121 TM2D2Q9BX73 214 aa3.67□□□□□ -1.82
HMGB1P40-201ENST00000525121 KRTAP1-5Q9BYS1 174 aa3.67□□□□□ -1.82
HMGB1P40-201ENST00000525121 Q9HAA7 133 aa3.67□□□□□ -1.82
HMGB1P40-201ENST00000525121 Q9UF83 564 aa3.67□□□□□ -1.82
HMGB1P40-201ENST00000525121 KMT2CQ8NEZ4 4911 aaKnown RBP3.66□□□□□ -1.82
HMGB1P40-201ENST00000525121 IBA57-AS1B1ANH7 110 aa3.66□□□□□ -1.82
HMGB1P40-201ENST00000525121 NCR2O95944 276 aa3.66□□□□□ -1.82
HMGB1P40-201ENST00000525121 APCSP02743 223 aa3.66□□□□□ -1.82
HMGB1P40-201ENST00000525121 PMCHP20382 165 aa3.66□□□□□ -1.82
HMGB1P40-201ENST00000525121 S100PP25815 95 aa3.66□□□□□ -1.82
HMGB1P40-201ENST00000525121 Q0VG73 95 aa3.66□□□□□ -1.82
HMGB1P40-201ENST00000525121 NDUFA5Q16718 116 aa3.66□□□□□ -1.82
HMGB1P40-201ENST00000525121 IQCJQ1A5X6 159 aa3.66□□□□□ -1.82
HMGB1P40-201ENST00000525121 MRPL54Q6P161 138 aaKnown RBP3.66□□□□□ -1.82
HMGB1P40-201ENST00000525121 AMN1Q8IY45 258 aa3.66□□□□□ -1.82
HMGB1P40-201ENST00000525121 SEC11CQ9BY50 192 aa3.66□□□□□ -1.82
HMGB1P40-201ENST00000525121 ST20Q9HBF5 79 aa3.66□□□□□ -1.82
HMGB1P40-201ENST00000525121 COX11Q9Y6N1 276 aa3.66□□□□□ -1.82
HMGB1P40-201ENST00000525121 DYNC2H1Q8NCM8 4307 aaKnown RBP3.65□□□□□ -1.82
HMGB1P40-201ENST00000525121 TRBV6-5A0A0K0K1A5 114 aa3.65□□□□□ -1.83
HMGB1P40-201ENST00000525121 LINC00862A6NCI5 91 aa3.65□□□□□ -1.83
HMGB1P40-201ENST00000525121 SDHAF1A6NFY7 115 aa3.65□□□□□ -1.83
HMGB1P40-201ENST00000525121 I3L3M4 83 aa3.65□□□□□ -1.83
HMGB1P40-201ENST00000525121 PPBPP02775 128 aa3.65□□□□□ -1.83
HMGB1P40-201ENST00000525121 ANGP03950 147 aaKnown RBP3.65□□□□□ -1.83
HMGB1P40-201ENST00000525121 RAB4AP20338 218 aa3.65□□□□□ -1.83
HMGB1P40-201ENST00000525121 FCER1GP30273 86 aa3.65□□□□□ -1.83
HMGB1P40-201ENST00000525121 CKS2P33552 79 aa3.65□□□□□ -1.83
HMGB1P40-201ENST00000525121 TNP2Q05952 138 aa3.65□□□□□ -1.83
HMGB1P40-201ENST00000525121 SMAGPQ0VAQ4 97 aa3.65□□□□□ -1.83
HMGB1P40-201ENST00000525121 GAGE6Q13070 117 aa3.65□□□□□ -1.83
HMGB1P40-201ENST00000525121 AMMECR1LQ6DCA0 310 aa3.65□□□□□ -1.83
HMGB1P40-201ENST00000525121 UBE2WQ96B02 151 aa3.65□□□□□ -1.83
HMGB1P40-201ENST00000525121 RPL39LQ96EH5 51 aaKnown RBP3.65□□□□□ -1.83
HMGB1P40-201ENST00000525121 BTF3L4Q96K17 158 aa3.65□□□□□ -1.83
HMGB1P40-201ENST00000525121 C1orf43Q9BWL3 253 aa3.65□□□□□ -1.83
HMGB1P40-201ENST00000525121 CTDSP1Q9GZU7 261 aa3.65□□□□□ -1.83
HMGB1P40-201ENST00000525121 KLK12Q9UKR0 248 aa3.65□□□□□ -1.83
HMGB1P40-201ENST00000525121 NACAE9PAV3 2078 aa3.65□□□□□ -1.83
HMGB1P40-201ENST00000525121 IGKV2D-24A0A075B6R9 120 aa3.64□□□□□ -1.83
HMGB1P40-201ENST00000525121 TRAV9-1A0A075B6T8 112 aa3.64□□□□□ -1.83
HMGB1P40-201ENST00000525121 H7C423 109 aa3.64□□□□□ -1.83
HMGB1P40-201ENST00000525121 TCAPO15273 167 aa3.64□□□□□ -1.83
HMGB1P40-201ENST00000525121 RHEBQ15382 184 aa3.64□□□□□ -1.83
HMGB1P40-201ENST00000525121 MPV17L2Q567V2 206 aa3.64□□□□□ -1.83
HMGB1P40-201ENST00000525121 FAM104BQ5XKR9 115 aa3.64□□□□□ -1.83
HMGB1P40-201ENST00000525121 RNF185Q96GF1 192 aa3.64□□□□□ -1.83
HMGB1P40-201ENST00000525121 TMEM101Q96IK0 257 aa3.64□□□□□ -1.83
HMGB1P40-201ENST00000525121 IMMP2LQ96T52 175 aa3.64□□□□□ -1.83
HMGB1P40-201ENST00000525121 KIR2DL4Q99706 377 aa3.64□□□□□ -1.83
HMGB1P40-201ENST00000525121 A0A1B0GVY2 172 aa3.63□□□□□ -1.83
HMGB1P40-201ENST00000525121 A0A1B0GXF2 115 aa3.63□□□□□ -1.83
HMGB1P40-201ENST00000525121 C16orf90A8MZG2 172 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms