RNA–Protein interactions for RNA: ENST00000525004.5

UBXN1-205, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-205ENST00000525004 MRPL51Q4U2R6 128 aaKnown RBP9.72□□□□□ -0.85
UBXN1-205ENST00000525004 TMEM136Q6ZRR5 245 aa9.72□□□□□ -0.85
UBXN1-205ENST00000525004 SH2D6Q7Z4S9 175 aa9.72□□□□□ -0.85
UBXN1-205ENST00000525004 DNAJC30Q96LL9 226 aa9.72□□□□□ -0.85
UBXN1-205ENST00000525004 GNB1LQ9BYB4 327 aa9.72□□□□□ -0.85
UBXN1-205ENST00000525004 NIT2Q9NQR4 276 aa9.72□□□□□ -0.85
UBXN1-205ENST00000525004 NEGR1Q7Z3B1 354 aa9.71□□□□□ -0.86
UBXN1-205ENST00000525004 VPS13DQ5THJ4 4388 aa9.7□□□□□ -0.86
UBXN1-205ENST00000525004 TGIF2-C20orf24A0A0A6YYL0 155 aa9.7□□□□□ -0.86
UBXN1-205ENST00000525004 TRAV26-2A0A0B4J265 109 aa9.7□□□□□ -0.86
UBXN1-205ENST00000525004 TRBV6-5A0A0K0K1A5 114 aa9.7□□□□□ -0.86
UBXN1-205ENST00000525004 GAS8-AS1O95177 125 aa9.7□□□□□ -0.86
UBXN1-205ENST00000525004 NUDT3O95989 172 aa9.7□□□□□ -0.86
UBXN1-205ENST00000525004 SRIP30626 198 aa9.7□□□□□ -0.86
UBXN1-205ENST00000525004 TIRAPP58753 221 aa9.7□□□□□ -0.86
UBXN1-205ENST00000525004 UBE2D3P61077 147 aa9.7□□□□□ -0.86
UBXN1-205ENST00000525004 UBE2D2P62837 147 aa9.7□□□□□ -0.86
UBXN1-205ENST00000525004 RPL36AP83881 106 aaKnown RBP9.7□□□□□ -0.86
UBXN1-205ENST00000525004 CBLN2Q8IUK8 224 aa9.7□□□□□ -0.86
UBXN1-205ENST00000525004 ZNRF2Q8NHG8 242 aa9.7□□□□□ -0.86
UBXN1-205ENST00000525004 RPL36ALQ969Q0 106 aaKnown RBP9.7□□□□□ -0.86
UBXN1-205ENST00000525004 GAGE12JA6NER3 117 aa9.69□□□□□ -0.86
UBXN1-205ENST00000525004 HLA-DQA1P01909 254 aa9.69□□□□□ -0.86
UBXN1-205ENST00000525004 PPBPP02775 128 aa9.69□□□□□ -0.86
UBXN1-205ENST00000525004 GAGE1Q13065 139 aa9.69□□□□□ -0.86
UBXN1-205ENST00000525004 GAGE4Q13068 117 aa9.69□□□□□ -0.86
UBXN1-205ENST00000525004 GAGE5Q13069 117 aa9.69□□□□□ -0.86
UBXN1-205ENST00000525004 GAGE13Q4V321 117 aa9.69□□□□□ -0.86
UBXN1-205ENST00000525004 NRACQ8N912 160 aa9.69□□□□□ -0.86
UBXN1-205ENST00000525004 PPP1R17O96001 155 aa9.68□□□□□ -0.86
UBXN1-205ENST00000525004 MT-ND6P03923 174 aa9.68□□□□□ -0.86
UBXN1-205ENST00000525004 RPS10P46783 165 aaKnown RBP9.68□□□□□ -0.86
UBXN1-205ENST00000525004 ESRGQ1W209 222 aa9.68□□□□□ -0.86
UBXN1-205ENST00000525004 LYPD5Q6UWN5 251 aa9.68□□□□□ -0.86
UBXN1-205ENST00000525004 ATP6V0E2Q8NHE4 81 aa9.68□□□□□ -0.86
UBXN1-205ENST00000525004 PHOX2AO14813 284 aa9.67□□□□□ -0.86
UBXN1-205ENST00000525004 POLR2KP53803 58 aaKnown RBP9.67□□□□□ -0.86
UBXN1-205ENST00000525004 LGALS9CQ6DKI2 356 aa9.67□□□□□ -0.86
UBXN1-205ENST00000525004 DAZ4Q86SG3 579 aaKnown RBP9.67□□□□□ -0.86
UBXN1-205ENST00000525004 RPL39LQ96EH5 51 aaKnown RBP9.67□□□□□ -0.86
UBXN1-205ENST00000525004 GTSF1LQ9H1H1 148 aa9.67□□□□□ -0.86
UBXN1-205ENST00000525004 DAZ3Q9NR90 486 aaKnown RBP9.67□□□□□ -0.86
UBXN1-205ENST00000525004 TNFRSF18Q9Y5U5 241 aa9.67□□□□□ -0.86
UBXN1-205ENST00000525004 DNAH1Q9P2D7 4330 aa9.66□□□□□ -0.86
UBXN1-205ENST00000525004 COLCA2A8K830 154 aa9.66□□□□□ -0.86
UBXN1-205ENST00000525004 PRSS47A8MTI9 375 aa9.66□□□□□ -0.86
UBXN1-205ENST00000525004 D6R8Y8 96 aa9.66□□□□□ -0.86
UBXN1-205ENST00000525004 CKS2P33552 79 aa9.66□□□□□ -0.86
UBXN1-205ENST00000525004 ORMDL3Q8N138 153 aa9.66□□□□□ -0.86
UBXN1-205ENST00000525004 LYSTQ99698 3801 aa9.65□□□□□ -0.86
UBXN1-205ENST00000525004 SMKR1H3BMG3 65 aa9.65□□□□□ -0.86
UBXN1-205ENST00000525004 CCL18P55774 89 aa9.65□□□□□ -0.86
UBXN1-205ENST00000525004 RPL32P62910 135 aaKnown RBP9.65□□□□□ -0.86
UBXN1-205ENST00000525004 OR10J3Q5JRS4 329 aa9.65□□□□□ -0.86
UBXN1-205ENST00000525004 C20orf78Q9BR46 151 aa9.65□□□□□ -0.86
UBXN1-205ENST00000525004 UPK3BQ9BT76 320 aa9.65□□□□□ -0.86
UBXN1-205ENST00000525004 LAMTOR2Q9Y2Q5 125 aa9.65□□□□□ -0.86
UBXN1-205ENST00000525004 LINC00588Q9Y4M8 146 aa9.65□□□□□ -0.86
UBXN1-205ENST00000525004 TRBV27A0A0K0K1C4 114 aa9.64□□□□□ -0.87
UBXN1-205ENST00000525004 SDHAF1A6NFY7 115 aa9.64□□□□□ -0.87
UBXN1-205ENST00000525004 SCO1O75880 301 aa9.64□□□□□ -0.87
UBXN1-205ENST00000525004 TNFRSF6BO95407 300 aa9.64□□□□□ -0.87
UBXN1-205ENST00000525004 NCR2O95944 276 aa9.64□□□□□ -0.87
UBXN1-205ENST00000525004 APCSP02743 223 aa9.64□□□□□ -0.87
UBXN1-205ENST00000525004 TMEM70Q9BUB7 260 aa9.64□□□□□ -0.87
UBXN1-205ENST00000525004 MRPS16Q9Y3D3 137 aaKnown RBP9.64□□□□□ -0.87
UBXN1-205ENST00000525004 NPYP01303 97 aa9.63□□□□□ -0.87
UBXN1-205ENST00000525004 SUMO2P61956 95 aaKnown RBP9.63□□□□□ -0.87
UBXN1-205ENST00000525004 TMEM97Q5BJF2 176 aa9.63□□□□□ -0.87
UBXN1-205ENST00000525004 PRELID3AQ96N28 172 aa9.63□□□□□ -0.87
UBXN1-205ENST00000525004 MRPL18Q9H0U6 180 aaKnown RBP9.63□□□□□ -0.87
UBXN1-205ENST00000525004 ST20Q9HBF5 79 aa9.63□□□□□ -0.87
UBXN1-205ENST00000525004 ALMS1Q8TCU4 4167 aa9.62□□□□□ -0.87
UBXN1-205ENST00000525004 LELP1Q5T871 98 aa9.62□□□□□ -0.87
UBXN1-205ENST00000525004 NTM-AS1Q6ZSK4 140 aa9.62□□□□□ -0.87
UBXN1-205ENST00000525004 LINC00476Q8WZB0 136 aa9.62□□□□□ -0.87
UBXN1-205ENST00000525004 TRAPPC1Q9Y5R8 145 aa9.62□□□□□ -0.87
UBXN1-205ENST00000525004 SACSQ9NZJ4 4579 aa9.61□□□□□ -0.87
UBXN1-205ENST00000525004 TRBV6-8A0A0A6YYG3 113 aa9.61□□□□□ -0.87
UBXN1-205ENST00000525004 I3L3M4 83 aa9.61□□□□□ -0.87
UBXN1-205ENST00000525004 VCYO14598 125 aa9.61□□□□□ -0.87
UBXN1-205ENST00000525004 FABP9Q0Z7S8 132 aa9.61□□□□□ -0.87
UBXN1-205ENST00000525004 KIAA1644Q3SXP7 199 aa9.61□□□□□ -0.87
UBXN1-205ENST00000525004 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.61□□□□□ -0.87
UBXN1-205ENST00000525004 ALKBH7Q9BT30 221 aaPredicted RBP9.61□□□□□ -0.87
UBXN1-205ENST00000525004 IGLV2-18A0A075B6J9 118 aa9.6□□□□□ -0.87
UBXN1-205ENST00000525004 IGHV3-38A0A0C4DH36 116 aa9.6□□□□□ -0.87
UBXN1-205ENST00000525004 IQCJQ1A5X6 159 aa9.6□□□□□ -0.87
UBXN1-205ENST00000525004 RAB5AP20339 215 aa9.59□□□□□ -0.87
UBXN1-205ENST00000525004 SMIM2Q9BVW6 85 aa9.59□□□□□ -0.87
UBXN1-205ENST00000525004 DNAH6Q9C0G6 4158 aa9.58□□□□□ -0.88
UBXN1-205ENST00000525004 LCE6AA0A183 80 aa9.58□□□□□ -0.88
UBXN1-205ENST00000525004 PMCHP20382 165 aa9.58□□□□□ -0.88
UBXN1-205ENST00000525004 COTL1Q14019 142 aa9.58□□□□□ -0.88
UBXN1-205ENST00000525004 KMT2AQ03164 3969 aa9.57□□□□□ -0.88
UBXN1-205ENST00000525004 TRAV8-6A0A0B4J262 113 aa9.57□□□□□ -0.88
UBXN1-205ENST00000525004 TSHBP01222 138 aa9.57□□□□□ -0.88
UBXN1-205ENST00000525004 ESDP10768 282 aa9.57□□□□□ -0.88
UBXN1-205ENST00000525004 UBE2DNLQ8IWF7 75 aa9.57□□□□□ -0.88
UBXN1-205ENST00000525004 MAP1LC3AQ9H492 121 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms