RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	C2orf66	Q6UXQ4	117 aa		7.93	□□□□□ -1.14
SPIDR-222	ENST00000524006	NDUFA11	Q86Y39	141 aa		7.93	□□□□□ -1.14
SPIDR-222	ENST00000524006	TOMM6	Q96B49	74 aa		7.93	□□□□□ -1.14
SPIDR-222	ENST00000524006	SPX	Q9BT56	116 aa		7.93	□□□□□ -1.14
SPIDR-222	ENST00000524006	JPT2	Q9H910	190 aa		7.93	□□□□□ -1.14
SPIDR-222	ENST00000524006	ZNF256	Q9Y2P7	627 aa	Predicted RBP	7.93	□□□□□ -1.14
SPIDR-222	ENST00000524006	KIF25-AS1	Q9Y6Z4	181 aa		7.93	□□□□□ -1.14
SPIDR-222	ENST00000524006	NACA	E9PAV3	2078 aa		7.93	□□□□□ -1.14
SPIDR-222	ENST00000524006	IGHV3OR16-12	A0A075B7B8	117 aa		7.92	□□□□□ -1.14
SPIDR-222	ENST00000524006		A0A087WX48	190 aa		7.92	□□□□□ -1.14
SPIDR-222	ENST00000524006	RBMY1B	A6NDE4	496 aa	Known RBP	7.92	□□□□□ -1.14
SPIDR-222	ENST00000524006	RBMY1E	A6NEQ0	496 aa	Known RBP	7.92	□□□□□ -1.14
SPIDR-222	ENST00000524006	SDHAF1	A6NFY7	115 aa		7.92	□□□□□ -1.14
SPIDR-222	ENST00000524006	RBMY1D	P0C7P1	496 aa	Known RBP	7.92	□□□□□ -1.14
SPIDR-222	ENST00000524006	RHOH	Q15669	191 aa		7.92	□□□□□ -1.14
SPIDR-222	ENST00000524006	ODF3L2	Q3SX64	289 aa		7.92	□□□□□ -1.14
SPIDR-222	ENST00000524006	LINC00467	Q9BRT7	94 aa		7.92	□□□□□ -1.14
SPIDR-222	ENST00000524006	DKK2	Q9UBU2	259 aa		7.92	□□□□□ -1.14
SPIDR-222	ENST00000524006	CHTOP	Q9Y3Y2	248 aa	Known RBP	7.92	□□□□□ -1.14
SPIDR-222	ENST00000524006	TRAV12-1	A0A0B4J245	112 aa		7.91	□□□□□ -1.14
SPIDR-222	ENST00000524006	TRBV6-5	A0A0K0K1A5	114 aa		7.91	□□□□□ -1.14
SPIDR-222	ENST00000524006		F8VRH5	84 aa		7.91	□□□□□ -1.14
SPIDR-222	ENST00000524006	TCTA	P57738	103 aa		7.91	□□□□□ -1.14
SPIDR-222	ENST00000524006	ANKRD39	Q53RE8	183 aa		7.91	□□□□□ -1.14
SPIDR-222	ENST00000524006	PIK3CD-AS1	Q5SR53	167 aa		7.91	□□□□□ -1.14
SPIDR-222	ENST00000524006	NEGR1	Q7Z3B1	354 aa		7.91	□□□□□ -1.14
SPIDR-222	ENST00000524006	C1QTNF4	Q9BXJ3	329 aa		7.91	□□□□□ -1.14
SPIDR-222	ENST00000524006	XCL2	Q9UBD3	114 aa		7.91	□□□□□ -1.14
SPIDR-222	ENST00000524006	TP53TG1	Q9Y2A0	90 aa		7.91	□□□□□ -1.14
SPIDR-222	ENST00000524006	TNFRSF18	Q9Y5U5	241 aa		7.91	□□□□□ -1.14
SPIDR-222	ENST00000524006		I3L3M4	83 aa		7.9	□□□□□ -1.14
SPIDR-222	ENST00000524006	RBMY1A1	P0DJD3	496 aa	Known RBP	7.9	□□□□□ -1.14
SPIDR-222	ENST00000524006	RBMY1C	P0DJD4	496 aa		7.9	□□□□□ -1.14
SPIDR-222	ENST00000524006	PROK1	P58294	105 aa		7.9	□□□□□ -1.14
SPIDR-222	ENST00000524006	HERVK_113	P61574	105 aa		7.9	□□□□□ -1.14
SPIDR-222	ENST00000524006	RBMY1F	Q15415	496 aa	Known RBP	7.9	□□□□□ -1.14
SPIDR-222	ENST00000524006	PAPPA-AS1	Q5QFB9	102 aa		7.9	□□□□□ -1.14
SPIDR-222	ENST00000524006	ZFP2	Q6ZN57	461 aa		7.9	□□□□□ -1.14
SPIDR-222	ENST00000524006	ERAS	Q7Z444	233 aa		7.9	□□□□□ -1.14
SPIDR-222	ENST00000524006	STPG4	Q8N801	248 aa		7.9	□□□□□ -1.14
SPIDR-222	ENST00000524006	TMEM141	Q96I45	108 aa		7.9	□□□□□ -1.14
SPIDR-222	ENST00000524006	TG	P01266	2768 aa		7.9	□□□□□ -1.15
SPIDR-222	ENST00000524006		M0QY20	66 aa		7.89	□□□□□ -1.15
SPIDR-222	ENST00000524006	CRYGD	P07320	174 aa		7.89	□□□□□ -1.15
SPIDR-222	ENST00000524006	LINC00315	P59091	139 aa		7.89	□□□□□ -1.15
SPIDR-222	ENST00000524006	ZC2HC1B	Q5TFG8	222 aa		7.89	□□□□□ -1.15
SPIDR-222	ENST00000524006	PTH2	Q96A98	100 aa		7.89	□□□□□ -1.15
SPIDR-222	ENST00000524006	MRPL16	Q9NX20	251 aa	Known RBP	7.89	□□□□□ -1.15
SPIDR-222	ENST00000524006	MRPL35	Q9NZE8	188 aa	Known RBP	7.89	□□□□□ -1.15
SPIDR-222	ENST00000524006	IGHV3-73	A0A0B4J1V6	119 aa		7.88	□□□□□ -1.15
SPIDR-222	ENST00000524006	TRBV27	A0A0K0K1C4	114 aa		7.88	□□□□□ -1.15
SPIDR-222	ENST00000524006		A6NDN8	102 aa		7.88	□□□□□ -1.15
SPIDR-222	ENST00000524006	IGLV1-51	P01701	117 aa		7.88	□□□□□ -1.15
SPIDR-222	ENST00000524006	HSD52	Q0P140	79 aa		7.88	□□□□□ -1.15
SPIDR-222	ENST00000524006	MORN3	Q6PF18	240 aa	Predicted RBP	7.88	□□□□□ -1.15
SPIDR-222	ENST00000524006	GTSCR1	Q86UQ5	136 aa		7.88	□□□□□ -1.15
SPIDR-222	ENST00000524006	FAM110A	Q9BQ89	295 aa		7.88	□□□□□ -1.15
SPIDR-222	ENST00000524006	SIVA1	O15304	175 aa		7.87	□□□□□ -1.15
SPIDR-222	ENST00000524006	DLEU1	O43261	78 aa		7.87	□□□□□ -1.15
SPIDR-222	ENST00000524006	WIPF1	O43516	503 aa		7.87	□□□□□ -1.15
SPIDR-222	ENST00000524006	RPL35A	P18077	110 aa	Known RBP	7.87	□□□□□ -1.15
SPIDR-222	ENST00000524006	POLR2K	P53803	58 aa	Known RBP	7.87	□□□□□ -1.15
SPIDR-222	ENST00000524006	PMVK	Q15126	192 aa		7.87	□□□□□ -1.15
SPIDR-222	ENST00000524006	MPV17L2	Q567V2	206 aa		7.87	□□□□□ -1.15
SPIDR-222	ENST00000524006	BOD1L2	Q8IYS8	172 aa		7.87	□□□□□ -1.15
SPIDR-222	ENST00000524006	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	7.87	□□□□□ -1.15
SPIDR-222	ENST00000524006	OR11H2	Q8NH07	326 aa		7.87	□□□□□ -1.15
SPIDR-222	ENST00000524006	BAALC	Q8WXS3	180 aa		7.87	□□□□□ -1.15
SPIDR-222	ENST00000524006	TIMM17A	Q99595	171 aa		7.87	□□□□□ -1.15
SPIDR-222	ENST00000524006	ZMAT4	Q9H898	229 aa		7.87	□□□□□ -1.15
SPIDR-222	ENST00000524006	PRKDC	P78527	4128 aa	Known RBP	7.87	□□□□□ -1.15
SPIDR-222	ENST00000524006	TRGV1	A0A0A0MS02	117 aa		7.86	□□□□□ -1.15
SPIDR-222	ENST00000524006	ZNF25	P17030	456 aa	Predicted RBP	7.86	□□□□□ -1.15
SPIDR-222	ENST00000524006	SEC11A	P67812	179 aa		7.86	□□□□□ -1.15
SPIDR-222	ENST00000524006	NEXN-AS1	Q8NBZ9	246 aa		7.86	□□□□□ -1.15
SPIDR-222	ENST00000524006	OR4C5	Q8NGB2	326 aa		7.86	□□□□□ -1.15
SPIDR-222	ENST00000524006	TMEM263	Q8WUH6	116 aa	Known RBP	7.86	□□□□□ -1.15
SPIDR-222	ENST00000524006	C16orf74	Q96GX8	76 aa		7.86	□□□□□ -1.15
SPIDR-222	ENST00000524006	DNAJC30	Q96LL9	226 aa		7.86	□□□□□ -1.15
SPIDR-222	ENST00000524006	EDA2R	Q9HAV5	297 aa		7.86	□□□□□ -1.15
SPIDR-222	ENST00000524006	TP73-AS1	Q9UF72	201 aa		7.86	□□□□□ -1.15
SPIDR-222	ENST00000524006	AZU1	P20160	251 aa		7.85	□□□□□ -1.15
SPIDR-222	ENST00000524006	RRN3P1	Q2M238	152 aa		7.85	□□□□□ -1.15
SPIDR-222	ENST00000524006	BVES-AS1	Q5T3Y7	98 aa		7.85	□□□□□ -1.15
SPIDR-222	ENST00000524006	TRAV8-6	A0A0B4J262	113 aa		7.84	□□□□□ -1.15
SPIDR-222	ENST00000524006	ADARB2-AS1	A8MUL3	147 aa		7.84	□□□□□ -1.15
SPIDR-222	ENST00000524006	RS1	O15537	224 aa		7.84	□□□□□ -1.15
SPIDR-222	ENST00000524006	TSHB	P01222	138 aa		7.84	□□□□□ -1.15
SPIDR-222	ENST00000524006	SMAGP	Q0VAQ4	97 aa		7.84	□□□□□ -1.15
SPIDR-222	ENST00000524006	C9orf66	Q5T8R8	295 aa		7.84	□□□□□ -1.15
SPIDR-222	ENST00000524006	CFAP126	Q5VTH2	177 aa		7.84	□□□□□ -1.15
SPIDR-222	ENST00000524006	C11orf72	Q8NBR9	251 aa		7.84	□□□□□ -1.15
SPIDR-222	ENST00000524006	ZMAT5	Q9UDW3	170 aa	Known RBP	7.84	□□□□□ -1.15
SPIDR-222	ENST00000524006	PRSS29P	A6NIE9	313 aa		7.83	□□□□□ -1.16
SPIDR-222	ENST00000524006	FGF6	P10767	208 aa		7.83	□□□□□ -1.16
SPIDR-222	ENST00000524006	INSL3	P51460	131 aa		7.83	□□□□□ -1.16
SPIDR-222	ENST00000524006	RPL39	P62891	51 aa	Known RBP	7.83	□□□□□ -1.16
SPIDR-222	ENST00000524006	COTL1	Q14019	142 aa		7.83	□□□□□ -1.16
SPIDR-222	ENST00000524006	BEAN1	Q3B7T3	259 aa		7.83	□□□□□ -1.16
SPIDR-222	ENST00000524006	C2orf91	Q6ZV80	131 aa		7.83	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms