RNA–Protein interactions for RNA: ENST00000523953.5

CA1-222, Transcript of carbonic anhydrase 1, human

APPRIS P1 TSL 1 (best) BASIC

Gene CA1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CA1-222	ENST00000523953	ZNF415	Q09FC8	603 aa		5.04	□□□□□ -1.6
CA1-222	ENST00000523953	KRTAP1-3	Q8IUG1	177 aa		5.04	□□□□□ -1.6
CA1-222	ENST00000523953	ZNRF2	Q8NHG8	242 aa		5.04	□□□□□ -1.6
CA1-222	ENST00000523953	DNAJC30	Q96LL9	226 aa		5.04	□□□□□ -1.6
CA1-222	ENST00000523953	DUX5	Q96PT3	197 aa		5.04	□□□□□ -1.6
CA1-222	ENST00000523953	NAA38	Q9BRA0	125 aa	Known RBP	5.04	□□□□□ -1.6
CA1-222	ENST00000523953	CHD8	Q9HCK8	2581 aa		5.03	□□□□□ -1.6
CA1-222	ENST00000523953	TMEM223	A0PJW6	202 aa		5.03	□□□□□ -1.6
CA1-222	ENST00000523953	RHOD	O00212	210 aa		5.03	□□□□□ -1.6
CA1-222	ENST00000523953	LEPROT	O15243	131 aa		5.03	□□□□□ -1.6
CA1-222	ENST00000523953	BEAN1	Q3B7T3	259 aa		5.03	□□□□□ -1.6
CA1-222	ENST00000523953	FAM74A4	Q5TZK3	123 aa		5.03	□□□□□ -1.6
CA1-222	ENST00000523953	SLC25A29	Q8N8R3	303 aa		5.03	□□□□□ -1.6
CA1-222	ENST00000523953	CSMD1	Q96PZ7	3565 aa		5.03	□□□□□ -1.6
CA1-222	ENST00000523953	RBMY1B	A6NDE4	496 aa	Known RBP	5.03	□□□□□ -1.6
CA1-222	ENST00000523953	RBMY1E	A6NEQ0	496 aa	Known RBP	5.03	□□□□□ -1.6
CA1-222	ENST00000523953	IGKV3-20	P01619	116 aa		5.03	□□□□□ -1.6
CA1-222	ENST00000523953	RBMY1D	P0C7P1	496 aa	Known RBP	5.03	□□□□□ -1.6
CA1-222	ENST00000523953	SLURP1	P55000	103 aa		5.03	□□□□□ -1.6
CA1-222	ENST00000523953	DEFB131A	P59861	70 aa		5.03	□□□□□ -1.6
CA1-222	ENST00000523953	SCGB2A2	Q13296	93 aa		5.03	□□□□□ -1.6
CA1-222	ENST00000523953	PLEKHB2	Q96CS7	222 aa		5.03	□□□□□ -1.6
CA1-222	ENST00000523953	SELENOK	Q9Y6D0	94 aa		5.03	□□□□□ -1.6
CA1-222	ENST00000523953	IGLV4-3	A0A075B6K6	122 aa		5.02	□□□□□ -1.61
CA1-222	ENST00000523953	CD300E	Q496F6	205 aa	Predicted RBP	5.02	□□□□□ -1.61
CA1-222	ENST00000523953	SCGB1D4	Q6XE38	83 aa		5.02	□□□□□ -1.61
CA1-222	ENST00000523953	BBC3	Q96PG8	261 aa	Predicted RBP	5.02	□□□□□ -1.61
CA1-222	ENST00000523953	MAP6D1	Q9H9H5	199 aa		5.02	□□□□□ -1.61
CA1-222	ENST00000523953	CFAP46	Q8IYW2	2715 aa		5.02	□□□□□ -1.61
CA1-222	ENST00000523953		J3QQQ9	107 aa		5.02	□□□□□ -1.61
CA1-222	ENST00000523953	FHL3	Q13643	280 aa		5.02	□□□□□ -1.61
CA1-222	ENST00000523953	DEFB114	Q30KQ6	69 aa		5.02	□□□□□ -1.61
CA1-222	ENST00000523953	LYRM7	Q5U5X0	104 aa		5.02	□□□□□ -1.61
CA1-222	ENST00000523953	C11orf72	Q8NBR9	251 aa		5.02	□□□□□ -1.61
CA1-222	ENST00000523953	MAPK1IP1L	Q8NDC0	245 aa		5.02	□□□□□ -1.61
CA1-222	ENST00000523953	VPS25	Q9BRG1	176 aa		5.02	□□□□□ -1.61
CA1-222	ENST00000523953	SPANXA1	Q9NS26	97 aa		5.02	□□□□□ -1.61
CA1-222	ENST00000523953	AKAP6	Q13023	2319 aa		5.02	□□□□□ -1.61
CA1-222	ENST00000523953	PIEZO1	Q92508	2521 aa		5.02	□□□□□ -1.61
CA1-222	ENST00000523953	KNCN	A6PVL3	124 aa		5.01	□□□□□ -1.61
CA1-222	ENST00000523953	SAP30	O75446	220 aa		5.01	□□□□□ -1.61
CA1-222	ENST00000523953	IGHV3-30	P01768	117 aa		5.01	□□□□□ -1.61
CA1-222	ENST00000523953	IGHV3-30-5	P0DP03	117 aa		5.01	□□□□□ -1.61
CA1-222	ENST00000523953	ZNF22	P17026	224 aa	Predicted RBP	5.01	□□□□□ -1.61
CA1-222	ENST00000523953	TSPEAR-AS2	P59090	65 aa		5.01	□□□□□ -1.61
CA1-222	ENST00000523953	MRPS36	P82909	103 aa	Known RBP	5.01	□□□□□ -1.61
CA1-222	ENST00000523953	RNF151	Q2KHN1	245 aa		5.01	□□□□□ -1.61
CA1-222	ENST00000523953	TMEM61	Q8N0U2	210 aa		5.01	□□□□□ -1.61
CA1-222	ENST00000523953	RAX2	Q96IS3	184 aa		5.01	□□□□□ -1.61
CA1-222	ENST00000523953	PRO0461	Q9UI25	63 aa		5.01	□□□□□ -1.61
CA1-222	ENST00000523953	RS1	O15537	224 aa		5.01	□□□□□ -1.61
CA1-222	ENST00000523953	INS	P01308	110 aa		5.01	□□□□□ -1.61
CA1-222	ENST00000523953	KRTAP10-9	P60411	292 aa		5.01	□□□□□ -1.61
CA1-222	ENST00000523953	UBE2D3	P61077	147 aa		5.01	□□□□□ -1.61
CA1-222	ENST00000523953	UBE2D2	P62837	147 aa		5.01	□□□□□ -1.61
CA1-222	ENST00000523953	TMEM170B	Q5T4T1	132 aa		5.01	□□□□□ -1.61
CA1-222	ENST00000523953	C18orf65	Q6ZTR6	163 aa		5.01	□□□□□ -1.61
CA1-222	ENST00000523953	IL17D	Q8TAD2	202 aa		5.01	□□□□□ -1.61
CA1-222	ENST00000523953		Q96MF0	132 aa		5.01	□□□□□ -1.61
CA1-222	ENST00000523953	IGHV3-53	P01767	116 aa		5	□□□□□ -1.61
CA1-222	ENST00000523953	LGALS3	P17931	250 aa	Known RBP	5	□□□□□ -1.61
CA1-222	ENST00000523953	SRSF9	Q13242	221 aa	Known RBP eCLIP	5	□□□□□ -1.61
CA1-222	ENST00000523953	CFAP126	Q5VTH2	177 aa		5	□□□□□ -1.61
CA1-222	ENST00000523953	KLHL30-AS1	Q8NEE0	82 aa		5	□□□□□ -1.61
CA1-222	ENST00000523953	ATP6V0E2	Q8NHE4	81 aa		5	□□□□□ -1.61
CA1-222	ENST00000523953	DUX3	Q96PT4	197 aa		5	□□□□□ -1.61
CA1-222	ENST00000523953	VCX2	Q9H322	139 aa		5	□□□□□ -1.61
CA1-222	ENST00000523953	IGSF10	Q6WRI0	2623 aa		5	□□□□□ -1.61
CA1-222	ENST00000523953	PRB1	P04280	392 aa		5	□□□□□ -1.61
CA1-222	ENST00000523953	NDUFA11	Q86Y39	141 aa		5	□□□□□ -1.61
CA1-222	ENST00000523953	DYNLRB2	Q8TF09	96 aa		5	□□□□□ -1.61
CA1-222	ENST00000523953	FAM104A	Q969W3	186 aa		5	□□□□□ -1.61
CA1-222	ENST00000523953	TIMM21	Q9BVV7	248 aa		5	□□□□□ -1.61
CA1-222	ENST00000523953	TINCR	A0A1B0GVN0	87 aa		4.99	□□□□□ -1.61
CA1-222	ENST00000523953	TSPAN13	O95857	204 aa		4.99	□□□□□ -1.61
CA1-222	ENST00000523953	CMC4	P56277	68 aa	Predicted RBP	4.99	□□□□□ -1.61
CA1-222	ENST00000523953	DEFB136	Q30KP8	78 aa		4.99	□□□□□ -1.61
CA1-222	ENST00000523953	GAGE13	Q4V321	117 aa		4.99	□□□□□ -1.61
CA1-222	ENST00000523953		Q6ZSV7	163 aa		4.99	□□□□□ -1.61
CA1-222	ENST00000523953	TNFRSF18	Q9Y5U5	241 aa		4.99	□□□□□ -1.61
CA1-222	ENST00000523953		M0QXV9	152 aa		4.99	□□□□□ -1.61
CA1-222	ENST00000523953	CHCHD7	Q9BUK0	85 aa		4.99	□□□□□ -1.61
CA1-222	ENST00000523953	MRPL16	Q9NX20	251 aa	Known RBP	4.99	□□□□□ -1.61
CA1-222	ENST00000523953	USP9X	Q93008	2570 aa	Predicted RBP	4.99	□□□□□ -1.61
CA1-222	ENST00000523953	ASH1L	Q9NR48	2969 aa	Known RBP	4.99	□□□□□ -1.61
CA1-222	ENST00000523953	SPTAN1	Q13813	2472 aa	Known RBP	4.99	□□□□□ -1.61
CA1-222	ENST00000523953	SVEP1	Q4LDE5	3571 aa		4.99	□□□□□ -1.61
CA1-222	ENST00000523953	UBR5	O95071	2799 aa	Predicted RBP	4.99	□□□□□ -1.61
CA1-222	ENST00000523953	TRBV20-1	A0A075B6N2	111 aa		4.99	□□□□□ -1.61
CA1-222	ENST00000523953		A0A0B4J2C4	111 aa		4.99	□□□□□ -1.61
CA1-222	ENST00000523953		J3QR89	54 aa		4.99	□□□□□ -1.61
CA1-222	ENST00000523953	EMP1	P54849	157 aa		4.99	□□□□□ -1.61
CA1-222	ENST00000523953	FAM19A3	Q7Z5A8	133 aa		4.99	□□□□□ -1.61
CA1-222	ENST00000523953	RNF183	Q96D59	192 aa		4.99	□□□□□ -1.61
CA1-222	ENST00000523953	FAM110A	Q9BQ89	295 aa		4.99	□□□□□ -1.61
CA1-222	ENST00000523953	ZFHX3	Q15911	3703 aa		4.98	□□□□□ -1.61
CA1-222	ENST00000523953	TEX48	A0A1B0GUV7	120 aa		4.98	□□□□□ -1.61
CA1-222	ENST00000523953	TMEM238	C9JI98	176 aa		4.98	□□□□□ -1.61
CA1-222	ENST00000523953	CD28	P10747	220 aa		4.98	□□□□□ -1.61
CA1-222	ENST00000523953	C10orf126	Q8N4M7	172 aa		4.98	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms