RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 PNRC1Q12796 327 aaPredicted RBP8.73□□□□□ -1.01
VEGFA-224ENST00000523873 RIGQ13278 110 aa8.73□□□□□ -1.01
VEGFA-224ENST00000523873 Q8N3U1 123 aa8.73□□□□□ -1.01
VEGFA-224ENST00000523873 RTL8CO15255 209 aa8.72□□□□□ -1.01
VEGFA-224ENST00000523873 GAS8-AS1O95177 125 aa8.72□□□□□ -1.01
VEGFA-224ENST00000523873 RASL11AQ6T310 242 aa8.72□□□□□ -1.01
VEGFA-224ENST00000523873 SMIM15Q7Z3B0 74 aa8.72□□□□□ -1.01
VEGFA-224ENST00000523873 GATD1Q8NB37 220 aa8.72□□□□□ -1.01
VEGFA-224ENST00000523873 DEFB104AQ8WTQ1 72 aa8.72□□□□□ -1.01
VEGFA-224ENST00000523873 TRAV8-6A0A0B4J262 113 aa8.71□□□□□ -1.02
VEGFA-224ENST00000523873 IGHV3-30P01768 117 aa8.71□□□□□ -1.02
VEGFA-224ENST00000523873 IGHV3-33P01772 117 aa8.71□□□□□ -1.02
VEGFA-224ENST00000523873 DNAH10OSP0CZ25 163 aa8.71□□□□□ -1.02
VEGFA-224ENST00000523873 IGHV3-30-3P0DP02 117 aa8.71□□□□□ -1.02
VEGFA-224ENST00000523873 IGHV3-30-5P0DP03 117 aa8.71□□□□□ -1.02
VEGFA-224ENST00000523873 TTC32Q5I0X7 151 aa8.71□□□□□ -1.02
VEGFA-224ENST00000523873 C1orf134Q5TEV5 83 aa8.71□□□□□ -1.02
VEGFA-224ENST00000523873 MRPL54Q6P161 138 aaKnown RBP8.71□□□□□ -1.02
VEGFA-224ENST00000523873 AMN1Q8IY45 258 aa8.71□□□□□ -1.02
VEGFA-224ENST00000523873 RPL39LQ96EH5 51 aaKnown RBP8.71□□□□□ -1.02
VEGFA-224ENST00000523873 RNF185Q96GF1 192 aa8.71□□□□□ -1.02
VEGFA-224ENST00000523873 TNFRSF18Q9Y5U5 241 aa8.71□□□□□ -1.02
VEGFA-224ENST00000523873 H7C1H1 209 aa8.7□□□□□ -1.02
VEGFA-224ENST00000523873 PPP1R2P9O14990 202 aa8.7□□□□□ -1.02
VEGFA-224ENST00000523873 CAMPP49913 170 aa8.7□□□□□ -1.02
VEGFA-224ENST00000523873 C6orf223Q8N319 242 aa8.7□□□□□ -1.02
VEGFA-224ENST00000523873 ANAPC16Q96DE5 110 aa8.7□□□□□ -1.02
VEGFA-224ENST00000523873 DNAJC30Q96LL9 226 aa8.7□□□□□ -1.02
VEGFA-224ENST00000523873 SEC11CQ9BY50 192 aa8.7□□□□□ -1.02
VEGFA-224ENST00000523873 TMEM191AQ9H0A3 160 aa8.7□□□□□ -1.02
VEGFA-224ENST00000523873 EPPK1P58107 5090 aaKnown RBP8.69□□□□□ -1.02
VEGFA-224ENST00000523873 SMKR1H3BMG3 65 aa8.69□□□□□ -1.02
VEGFA-224ENST00000523873 MT-ND4LP03901 98 aa8.69□□□□□ -1.02
VEGFA-224ENST00000523873 RAB4AP20338 218 aa8.69□□□□□ -1.02
VEGFA-224ENST00000523873 NTM-AS1Q6ZSK4 140 aa8.69□□□□□ -1.02
VEGFA-224ENST00000523873 NIT2Q9NQR4 276 aa8.69□□□□□ -1.02
VEGFA-224ENST00000523873 A0A087WWC5 75 aa8.68□□□□□ -1.02
VEGFA-224ENST00000523873 NCR2O95944 276 aa8.68□□□□□ -1.02
VEGFA-224ENST00000523873 DNAH2Q9P225 4427 aa8.68□□□□□ -1.02
VEGFA-224ENST00000523873 TRBV6-8A0A0A6YYG3 113 aa8.67□□□□□ -1.02
VEGFA-224ENST00000523873 A0A1B0GXF2 115 aa8.67□□□□□ -1.02
VEGFA-224ENST00000523873 RPS10P46783 165 aaKnown RBP8.67□□□□□ -1.02
VEGFA-224ENST00000523873 LINC01556Q5JQF7 62 aa8.67□□□□□ -1.02
VEGFA-224ENST00000523873 C10orf91Q5T1B1 145 aa8.67□□□□□ -1.02
VEGFA-224ENST00000523873 DAZ4Q86SG3 579 aaKnown RBP8.67□□□□□ -1.02
VEGFA-224ENST00000523873 DAZ3Q9NR90 486 aaKnown RBP8.67□□□□□ -1.02
VEGFA-224ENST00000523873 DNAH17Q9UFH2 4485 aa8.67□□□□□ -1.02
VEGFA-224ENST00000523873 PRSS29PA6NIE9 313 aa8.66□□□□□ -1.02
VEGFA-224ENST00000523873 HBBP68871 147 aa8.66□□□□□ -1.02
VEGFA-224ENST00000523873 NIT1Q86X76 327 aa8.66□□□□□ -1.02
VEGFA-224ENST00000523873 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.66□□□□□ -1.02
VEGFA-224ENST00000523873 CARHSP1Q9Y2V2 147 aaKnown RBP8.66□□□□□ -1.02
VEGFA-224ENST00000523873 TRAV9-2A0A087WT02 112 aa8.65□□□□□ -1.02
VEGFA-224ENST00000523873 TNP2Q05952 138 aa8.65□□□□□ -1.02
VEGFA-224ENST00000523873 MRPL51Q4U2R6 128 aaKnown RBP8.65□□□□□ -1.02
VEGFA-224ENST00000523873 FAM104BQ5XKR9 115 aa8.65□□□□□ -1.02
VEGFA-224ENST00000523873 A0A1B0GW15 77 aa8.64□□□□□ -1.03
VEGFA-224ENST00000523873 C7orf77A4D0Y5 90 aa8.64□□□□□ -1.03
VEGFA-224ENST00000523873 GAGE6Q13070 117 aa8.64□□□□□ -1.03
VEGFA-224ENST00000523873 CLRN3Q8NCR9 226 aa8.64□□□□□ -1.03
VEGFA-224ENST00000523873 MRAP2Q96G30 205 aa8.64□□□□□ -1.03
VEGFA-224ENST00000523873 CHCHD5Q9BSY4 110 aa8.64□□□□□ -1.03
VEGFA-224ENST00000523873 Q9HAA7 133 aa8.64□□□□□ -1.03
VEGFA-224ENST00000523873 TRBV25-1A0A075B6N4 114 aa8.63□□□□□ -1.03
VEGFA-224ENST00000523873 IGHV1-24A0A0C4DH33 117 aa8.63□□□□□ -1.03
VEGFA-224ENST00000523873 SDHAF1A6NFY7 115 aa8.63□□□□□ -1.03
VEGFA-224ENST00000523873 TMEM262E9PQX1 116 aa8.63□□□□□ -1.03
VEGFA-224ENST00000523873 TMEM97Q5BJF2 176 aa8.63□□□□□ -1.03
VEGFA-224ENST00000523873 Q6ZRN7 208 aaPredicted RBP8.63□□□□□ -1.03
VEGFA-224ENST00000523873 LINC00336Q6ZUF6 198 aa8.63□□□□□ -1.03
VEGFA-224ENST00000523873 C10orf126Q8N4M7 172 aa8.63□□□□□ -1.03
VEGFA-224ENST00000523873 NRACQ8N912 160 aa8.63□□□□□ -1.03
VEGFA-224ENST00000523873 FRZBQ92765 325 aa8.63□□□□□ -1.03
VEGFA-224ENST00000523873 CTDSP1Q9GZU7 261 aa8.63□□□□□ -1.03
VEGFA-224ENST00000523873 FAT2Q9NYQ8 4349 aa8.63□□□□□ -1.03
VEGFA-224ENST00000523873 TRBV6-5A0A0K0K1A5 114 aa8.62□□□□□ -1.03
VEGFA-224ENST00000523873 IBA57-AS1B1ANH7 110 aa8.62□□□□□ -1.03
VEGFA-224ENST00000523873 APOC3P02656 99 aa8.62□□□□□ -1.03
VEGFA-224ENST00000523873 S100A8P05109 93 aa8.62□□□□□ -1.03
VEGFA-224ENST00000523873 IQCJQ1A5X6 159 aa8.62□□□□□ -1.03
VEGFA-224ENST00000523873 MPV17L2Q567V2 206 aa8.62□□□□□ -1.03
VEGFA-224ENST00000523873 KCNIP4Q6PIL6 250 aa8.62□□□□□ -1.03
VEGFA-224ENST00000523873 ATRAIDQ6UW56 229 aa8.62□□□□□ -1.03
VEGFA-224ENST00000523873 ATP5L2Q7Z4Y8 100 aa8.62□□□□□ -1.03
VEGFA-224ENST00000523873 SLC7A5P1Q8MH63 180 aa8.62□□□□□ -1.03
VEGFA-224ENST00000523873 ST20Q9HBF5 79 aa8.62□□□□□ -1.03
VEGFA-224ENST00000523873 RPS10P5Q9NQ39 176 aa8.62□□□□□ -1.03
VEGFA-224ENST00000523873 KLK12Q9UKR0 248 aa8.62□□□□□ -1.03
VEGFA-224ENST00000523873 URGCP-MRPS24S4R325 110 aa8.62□□□□□ -1.03
VEGFA-224ENST00000523873 A0A087WX48 190 aa8.61□□□□□ -1.03
VEGFA-224ENST00000523873 A0A1B0GVY2 172 aa8.61□□□□□ -1.03
VEGFA-224ENST00000523873 D6R8Y8 96 aa8.61□□□□□ -1.03
VEGFA-224ENST00000523873 PMCHP20382 165 aa8.61□□□□□ -1.03
VEGFA-224ENST00000523873 AMTP48728 403 aa8.61□□□□□ -1.03
VEGFA-224ENST00000523873 COTL1Q14019 142 aa8.61□□□□□ -1.03
VEGFA-224ENST00000523873 Q8N976 141 aa8.61□□□□□ -1.03
VEGFA-224ENST00000523873 BTF3L4Q96K17 158 aa8.61□□□□□ -1.03
VEGFA-224ENST00000523873 IMMP2LQ96T52 175 aa8.61□□□□□ -1.03
VEGFA-224ENST00000523873 TMEM70Q9BUB7 260 aa8.61□□□□□ -1.03
VEGFA-224ENST00000523873 TMEM242Q9NWH2 141 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms