RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 ATP5G1P05496 136 aa6.63□□□□□ -1.35
SDCBP-212ENST00000523483 LINC00315P59091 139 aa6.63□□□□□ -1.35
SDCBP-212ENST00000523483 ZNRF2Q8NHG8 242 aa6.63□□□□□ -1.35
SDCBP-212ENST00000523483 IFI27P40305 119 aaPredicted RBP6.63□□□□□ -1.35
SDCBP-212ENST00000523483 PMCHL1Q16048 86 aa6.63□□□□□ -1.35
SDCBP-212ENST00000523483 C18orf32Q8TCD1 76 aa6.63□□□□□ -1.35
SDCBP-212ENST00000523483 MAP1LC3AQ9H492 121 aa6.63□□□□□ -1.35
SDCBP-212ENST00000523483 HHLA3Q9XRX5 114 aa6.63□□□□□ -1.35
SDCBP-212ENST00000523483 TRAV26-1A0A087WT03 109 aa6.62□□□□□ -1.35
SDCBP-212ENST00000523483 H7C1H1 209 aa6.62□□□□□ -1.35
SDCBP-212ENST00000523483 PMCHP20382 165 aa6.62□□□□□ -1.35
SDCBP-212ENST00000523483 FA2HQ7L5A8 372 aa6.62□□□□□ -1.35
SDCBP-212ENST00000523483 PRKDCP78527 4128 aaKnown RBP6.62□□□□□ -1.35
SDCBP-212ENST00000523483 M0QY20 66 aa6.62□□□□□ -1.35
SDCBP-212ENST00000523483 TCAPO15273 167 aa6.62□□□□□ -1.35
SDCBP-212ENST00000523483 PPBPP02775 128 aa6.62□□□□□ -1.35
SDCBP-212ENST00000523483 HOXA5P20719 270 aa6.62□□□□□ -1.35
SDCBP-212ENST00000523483 SNRPEP62304 92 aaKnown RBP6.62□□□□□ -1.35
SDCBP-212ENST00000523483 C12orf74Q32Q52 190 aa6.62□□□□□ -1.35
SDCBP-212ENST00000523483 MRAP2Q96G30 205 aa6.62□□□□□ -1.35
SDCBP-212ENST00000523483 SDHAF1A6NFY7 115 aa6.62□□□□□ -1.35
SDCBP-212ENST00000523483 ST20Q9HBF5 79 aa6.62□□□□□ -1.35
SDCBP-212ENST00000523483 HSBP1O75506 76 aa6.61□□□□□ -1.35
SDCBP-212ENST00000523483 SERF1AO75920 110 aa6.61□□□□□ -1.35
SDCBP-212ENST00000523483 SUMO2P61956 95 aaKnown RBP6.61□□□□□ -1.35
SDCBP-212ENST00000523483 FAM19A2Q8N3H0 131 aa6.61□□□□□ -1.35
SDCBP-212ENST00000523483 K7EQD1 137 aa6.61□□□□□ -1.35
SDCBP-212ENST00000523483 PAX4O43316 350 aa6.61□□□□□ -1.35
SDCBP-212ENST00000523483 GYPEP15421 78 aa6.61□□□□□ -1.35
SDCBP-212ENST00000523483 PHOX2AO14813 284 aa6.61□□□□□ -1.35
SDCBP-212ENST00000523483 FHL2Q14192 279 aa6.61□□□□□ -1.35
SDCBP-212ENST00000523483 NIT2Q9NQR4 276 aa6.61□□□□□ -1.35
SDCBP-212ENST00000523483 FABP4P15090 132 aa6.6□□□□□ -1.35
SDCBP-212ENST00000523483 S100A2P29034 98 aa6.6□□□□□ -1.35
SDCBP-212ENST00000523483 NRACQ8N912 160 aa6.6□□□□□ -1.35
SDCBP-212ENST00000523483 PRADC1Q9BSG0 188 aa6.6□□□□□ -1.35
SDCBP-212ENST00000523483 NUDT3O95989 172 aa6.6□□□□□ -1.35
SDCBP-212ENST00000523483 FCER1GP30273 86 aa6.6□□□□□ -1.35
SDCBP-212ENST00000523483 RPL36AP83881 106 aaKnown RBP6.6□□□□□ -1.35
SDCBP-212ENST00000523483 NIT1Q86X76 327 aa6.6□□□□□ -1.35
SDCBP-212ENST00000523483 RPL36ALQ969Q0 106 aaKnown RBP6.6□□□□□ -1.35
SDCBP-212ENST00000523483 DEFB131BA0A096LNP1 70 aa6.59□□□□□ -1.35
SDCBP-212ENST00000523483 NUPR1O60356 82 aa6.59□□□□□ -1.35
SDCBP-212ENST00000523483 BTF3P20290 206 aaKnown RBP6.59□□□□□ -1.35
SDCBP-212ENST00000523483 RHOHQ15669 191 aa6.59□□□□□ -1.35
SDCBP-212ENST00000523483 ZFP2Q6ZN57 461 aa6.59□□□□□ -1.35
SDCBP-212ENST00000523483 NEXN-AS1Q8NBZ9 246 aa6.59□□□□□ -1.35
SDCBP-212ENST00000523483 AP5S1Q9NUS5 200 aa6.59□□□□□ -1.35
SDCBP-212ENST00000523483 PRO0255Q9UI72 69 aa6.59□□□□□ -1.35
SDCBP-212ENST00000523483 PIK3CD-AS1Q5SR53 167 aa6.59□□□□□ -1.35
SDCBP-212ENST00000523483 TMEM70Q9BUB7 260 aa6.59□□□□□ -1.35
SDCBP-212ENST00000523483 H0Y8G0 127 aa6.59□□□□□ -1.35
SDCBP-212ENST00000523483 AMTP48728 403 aa6.59□□□□□ -1.35
SDCBP-212ENST00000523483 UFSP1Q6NVU6 142 aa6.59□□□□□ -1.35
SDCBP-212ENST00000523483 KIR2DL4Q99706 377 aa6.59□□□□□ -1.35
SDCBP-212ENST00000523483 C11orf68Q9H3H3 251 aaKnown RBP6.59□□□□□ -1.35
SDCBP-212ENST00000523483 TEX48A0A1B0GUV7 120 aa6.58□□□□□ -1.36
SDCBP-212ENST00000523483 LINC00614P0C842 121 aa6.58□□□□□ -1.36
SDCBP-212ENST00000523483 SMIM2Q9BVW6 85 aa6.58□□□□□ -1.36
SDCBP-212ENST00000523483 TRBV7-3A0A075B6L6 115 aa6.58□□□□□ -1.36
SDCBP-212ENST00000523483 PTH2Q96A98 100 aa6.58□□□□□ -1.36
SDCBP-212ENST00000523483 U3KQK5 164 aa6.58□□□□□ -1.36
SDCBP-212ENST00000523483 PPP1R17O96001 155 aa6.58□□□□□ -1.36
SDCBP-212ENST00000523483 HUWE1Q7Z6Z7 4374 aaKnown RBP6.58□□□□□ -1.36
SDCBP-212ENST00000523483 TENM2Q9NT68 2774 aa6.58□□□□□ -1.36
SDCBP-212ENST00000523483 AKR1D1P51857 326 aa6.57□□□□□ -1.36
SDCBP-212ENST00000523483 CRYBA4P53673 196 aa6.57□□□□□ -1.36
SDCBP-212ENST00000523483 C18orf15Q96N68 181 aa6.57□□□□□ -1.36
SDCBP-212ENST00000523483 IGLL5B9A064 214 aa6.57□□□□□ -1.36
SDCBP-212ENST00000523483 LINC00612Q8N6U2 182 aa6.57□□□□□ -1.36
SDCBP-212ENST00000523483 NDUFAF3Q9BU61 184 aa6.57□□□□□ -1.36
SDCBP-212ENST00000523483 TRBV6-4A0A1B0GX49 114 aa6.57□□□□□ -1.36
SDCBP-212ENST00000523483 LAMTOR2Q9Y2Q5 125 aa6.57□□□□□ -1.36
SDCBP-212ENST00000523483 VCYO14598 125 aa6.56□□□□□ -1.36
SDCBP-212ENST00000523483 NXT2Q9NPJ8 142 aaKnown RBP6.56□□□□□ -1.36
SDCBP-212ENST00000523483 NHLRC4P0CG21 123 aaPredicted RBP6.56□□□□□ -1.36
SDCBP-212ENST00000523483 Q0VG73 95 aa6.56□□□□□ -1.36
SDCBP-212ENST00000523483 COTL1Q14019 142 aa6.56□□□□□ -1.36
SDCBP-212ENST00000523483 VSIG2Q96IQ7 327 aa6.56□□□□□ -1.36
SDCBP-212ENST00000523483 C20orf78Q9BR46 151 aa6.56□□□□□ -1.36
SDCBP-212ENST00000523483 I3L3M4 83 aa6.55□□□□□ -1.36
SDCBP-212ENST00000523483 URB1-AS1Q96HZ7 61 aa6.55□□□□□ -1.36
SDCBP-212ENST00000523483 DNAH9Q9NYC9 4486 aa6.55□□□□□ -1.36
SDCBP-212ENST00000523483 LINC00310P59036 64 aa6.55□□□□□ -1.36
SDCBP-212ENST00000523483 Q8N8P6 123 aa6.55□□□□□ -1.36
SDCBP-212ENST00000523483 TRBV10-1A0A0K0K1A3 114 aa6.54□□□□□ -1.36
SDCBP-212ENST00000523483 LAGE3Q14657 143 aa6.54□□□□□ -1.36
SDCBP-212ENST00000523483 ZFAND6Q6FIF0 208 aa6.54□□□□□ -1.36
SDCBP-212ENST00000523483 ATP6V0E2Q8NHE4 81 aa6.54□□□□□ -1.36
SDCBP-212ENST00000523483 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.54□□□□□ -1.36
SDCBP-212ENST00000523483 IGKV2-29A2NJV5 120 aaPredicted RBP6.54□□□□□ -1.36
SDCBP-212ENST00000523483 RPL39P62891 51 aaKnown RBP6.54□□□□□ -1.36
SDCBP-212ENST00000523483 TRAV10A0A0B4J240 114 aa6.54□□□□□ -1.36
SDCBP-212ENST00000523483 POLR2KP53803 58 aaKnown RBP6.54□□□□□ -1.36
SDCBP-212ENST00000523483 CHCHD5Q9BSY4 110 aa6.54□□□□□ -1.36
SDCBP-212ENST00000523483 IGHV1-24A0A0C4DH33 117 aa6.53□□□□□ -1.36
SDCBP-212ENST00000523483 TMEM262E9PQX1 116 aa6.53□□□□□ -1.36
SDCBP-212ENST00000523483 CIDEAO60543 219 aa6.53□□□□□ -1.36
SDCBP-212ENST00000523483 ICOSQ9Y6W8 199 aa6.53□□□□□ -1.36
SDCBP-212ENST00000523483 MRPL23Q16540 153 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms