RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 OBSL1O75147 1896 aa2.24□□□□□ -2.05
SKP1-208ENST00000521216 PLXNA3P51805 1871 aa2.24□□□□□ -2.05
SKP1-208ENST00000521216 TRIOBPQ9H2D6 2365 aa2.24□□□□□ -2.05
SKP1-208ENST00000521216 A0A0D9SEW6 157 aa2.24□□□□□ -2.05
SKP1-208ENST00000521216 CTXND1A0A1B0GTU2 59 aa2.24□□□□□ -2.05
SKP1-208ENST00000521216 LOC389332A0A1B0GUA5 103 aa2.24□□□□□ -2.05
SKP1-208ENST00000521216 SMIM27A0A1W2PRY6 76 aa2.24□□□□□ -2.05
SKP1-208ENST00000521216 CRYM-AS1A6NIL9 109 aa2.24□□□□□ -2.05
SKP1-208ENST00000521216 H3BMM0 161 aa2.24□□□□□ -2.05
SKP1-208ENST00000521216 SLC25A20O43772 301 aa2.24□□□□□ -2.05
SKP1-208ENST00000521216 COX7A2P2O60397 106 aa2.24□□□□□ -2.05
SKP1-208ENST00000521216 FXYD2P54710 66 aa2.24□□□□□ -2.05
SKP1-208ENST00000521216 SNRPD3P62318 126 aaKnown RBP2.24□□□□□ -2.05
SKP1-208ENST00000521216 RPL18Q07020 188 aaKnown RBP2.24□□□□□ -2.05
SKP1-208ENST00000521216 MIC13Q5XKP0 118 aa2.24□□□□□ -2.05
SKP1-208ENST00000521216 KRTAP5-7Q6L8G8 165 aa2.24□□□□□ -2.05
SKP1-208ENST00000521216 FAM19A2Q8N3H0 131 aa2.24□□□□□ -2.05
SKP1-208ENST00000521216 RPP25LQ8N5L8 163 aaKnown RBP2.24□□□□□ -2.05
SKP1-208ENST00000521216 C3orf56Q8N813 242 aa2.24□□□□□ -2.05
SKP1-208ENST00000521216 C10orf105Q8TEF2 133 aa2.24□□□□□ -2.05
SKP1-208ENST00000521216 UBE2WQ96B02 151 aa2.24□□□□□ -2.05
SKP1-208ENST00000521216 PCNX2A6NKB5 2137 aa2.24□□□□□ -2.05
SKP1-208ENST00000521216 NINQ8N4C6 2090 aa2.24□□□□□ -2.05
SKP1-208ENST00000521216 ZNF236Q9UL36 1845 aa2.24□□□□□ -2.05
SKP1-208ENST00000521216 HEATR5AQ86XA9 2040 aa2.24□□□□□ -2.05
SKP1-208ENST00000521216 DOCK6Q96HP0 2047 aa2.24□□□□□ -2.05
SKP1-208ENST00000521216 BAZ2BQ9UIF8 2168 aaKnown RBP2.23□□□□□ -2.05
SKP1-208ENST00000521216 ANKRD36A6QL64 1941 aa2.23□□□□□ -2.05
SKP1-208ENST00000521216 IGLV10-54A0A075B6I4 117 aa2.23□□□□□ -2.05
SKP1-208ENST00000521216 A0A0B4J2C4 111 aa2.23□□□□□ -2.05
SKP1-208ENST00000521216 C19orf71A6NCJ1 209 aa2.23□□□□□ -2.05
SKP1-208ENST00000521216 SDHAF1A6NFY7 115 aa2.23□□□□□ -2.05
SKP1-208ENST00000521216 C17orf51A8MQB3 221 aa2.23□□□□□ -2.05
SKP1-208ENST00000521216 M0R378 163 aa2.23□□□□□ -2.05
SKP1-208ENST00000521216 PIN1P1O15428 100 aa2.23□□□□□ -2.05
SKP1-208ENST00000521216 EFNA4P52798 201 aa2.23□□□□□ -2.05
SKP1-208ENST00000521216 FXYD6P3P58550 94 aa2.23□□□□□ -2.05
SKP1-208ENST00000521216 RPL38P63173 70 aaKnown RBP2.23□□□□□ -2.05
SKP1-208ENST00000521216 HBBP68871 147 aa2.23□□□□□ -2.05
SKP1-208ENST00000521216 ZNF56Q15929 161 aa2.23□□□□□ -2.05
SKP1-208ENST00000521216 KRTAP6-3Q3LI67 103 aa2.23□□□□□ -2.05
SKP1-208ENST00000521216 FP248Q71RG6 208 aaPredicted RBP2.23□□□□□ -2.05
SKP1-208ENST00000521216 MORN4Q8NDC4 146 aa2.23□□□□□ -2.05
SKP1-208ENST00000521216 OR8A1Q8NGG7 326 aa2.23□□□□□ -2.05
SKP1-208ENST00000521216 TOMM6Q96B49 74 aa2.23□□□□□ -2.05
SKP1-208ENST00000521216 CXCL16Q9H2A7 254 aa2.23□□□□□ -2.05
SKP1-208ENST00000521216 C11orf68Q9H3H3 251 aaKnown RBP2.23□□□□□ -2.05
SKP1-208ENST00000521216 V9GYV3 84 aa2.23□□□□□ -2.05
SKP1-208ENST00000521216 COL11A1P12107 1806 aaPredicted RBP2.23□□□□□ -2.05
SKP1-208ENST00000521216 SCN10AQ9Y5Y9 1956 aa2.22□□□□□ -2.05
SKP1-208ENST00000521216 TRBV20OR9-2A0A075B6H5 130 aa2.22□□□□□ -2.05
SKP1-208ENST00000521216 TRBV25-1A0A075B6N4 114 aa2.22□□□□□ -2.05
SKP1-208ENST00000521216 TRAV3A0A0B4J244 114 aa2.22□□□□□ -2.05
SKP1-208ENST00000521216 TRBV10-2A0A0K0K1G8 114 aa2.22□□□□□ -2.05
SKP1-208ENST00000521216 A0A1B0GWA3 101 aa2.22□□□□□ -2.05
SKP1-208ENST00000521216 IBA57-AS1B1ANH7 110 aa2.22□□□□□ -2.05
SKP1-208ENST00000521216 FFAR1O14842 300 aa2.22□□□□□ -2.05
SKP1-208ENST00000521216 TIMM17BO60830 172 aa2.22□□□□□ -2.05
SKP1-208ENST00000521216 IGHV3-53P01767 116 aa2.22□□□□□ -2.05
SKP1-208ENST00000521216 IFI6P09912 130 aa2.22□□□□□ -2.05
SKP1-208ENST00000521216 UBE2D1P51668 147 aa2.22□□□□□ -2.05
SKP1-208ENST00000521216 CCL23P55773 120 aa2.22□□□□□ -2.05
SKP1-208ENST00000521216 UBE2BP63146 152 aa2.22□□□□□ -2.05
SKP1-208ENST00000521216 ATXN8Q156A1 80 aa2.22□□□□□ -2.05
SKP1-208ENST00000521216 LCA10Q71F78 164 aa2.22□□□□□ -2.05
SKP1-208ENST00000521216 NDUFA11Q86Y39 141 aa2.22□□□□□ -2.05
SKP1-208ENST00000521216 Q8N2B8 174 aa2.22□□□□□ -2.05
SKP1-208ENST00000521216 RPRMLQ8N4K4 120 aa2.22□□□□□ -2.05
SKP1-208ENST00000521216 TMEM75Q8N9X5 138 aa2.22□□□□□ -2.05
SKP1-208ENST00000521216 CCL17Q92583 94 aa2.22□□□□□ -2.05
SKP1-208ENST00000521216 RALGAPA2Q2PPJ7 1873 aa2.22□□□□□ -2.05
SKP1-208ENST00000521216 EXPH5Q8NEV8 1989 aa2.21□□□□□ -2.05
SKP1-208ENST00000521216 PTPRDP23468 1912 aa2.21□□□□□ -2.06
SKP1-208ENST00000521216 TRBV7-3A0A075B6L6 115 aa2.21□□□□□ -2.06
SKP1-208ENST00000521216 TRAV41A0A0B4J266 112 aa2.21□□□□□ -2.06
SKP1-208ENST00000521216 C3orf84H3BNL1 204 aa2.21□□□□□ -2.06
SKP1-208ENST00000521216 ZNF73O43830 326 aaPredicted RBP2.21□□□□□ -2.06
SKP1-208ENST00000521216 IGKV1D-33P01593 117 aa2.21□□□□□ -2.06
SKP1-208ENST00000521216 IGKV1-33P01594 117 aa2.21□□□□□ -2.06
SKP1-208ENST00000521216 CKS2P33552 79 aa2.21□□□□□ -2.06
SKP1-208ENST00000521216 DYNLT3P51808 116 aa2.21□□□□□ -2.06
SKP1-208ENST00000521216 KRTAP12-4P60329 112 aa2.21□□□□□ -2.06
SKP1-208ENST00000521216 CLLU1OSQ5K130 101 aa2.21□□□□□ -2.06
SKP1-208ENST00000521216 SLC48A1Q6P1K1 146 aa2.21□□□□□ -2.06
SKP1-208ENST00000521216 RPS27LQ71UM5 84 aaKnown RBP2.21□□□□□ -2.06
SKP1-208ENST00000521216 Q8N8P6 123 aa2.21□□□□□ -2.06
SKP1-208ENST00000521216 DCANP1Q8TF63 244 aa2.21□□□□□ -2.06
SKP1-208ENST00000521216 CCL13Q99616 98 aa2.21□□□□□ -2.06
SKP1-208ENST00000521216 TAS2R4Q9NYW5 299 aa2.21□□□□□ -2.06
SKP1-208ENST00000521216 DYSFO75923 2080 aa2.21□□□□□ -2.06
SKP1-208ENST00000521216 TRAV8-3A0A0A6YYJ7 113 aa2.2□□□□□ -2.06
SKP1-208ENST00000521216 IGHV3-21A0A0B4J1V1 117 aa2.2□□□□□ -2.06
SKP1-208ENST00000521216 TRAV13-2A0A0B4J235 113 aa2.2□□□□□ -2.06
SKP1-208ENST00000521216 LOC107984156A0A0G2JMH3 177 aa2.2□□□□□ -2.06
SKP1-208ENST00000521216 H3BP45 60 aa2.2□□□□□ -2.06
SKP1-208ENST00000521216 H3BVH4 76 aa2.2□□□□□ -2.06
SKP1-208ENST00000521216 K7ERJ3 54 aa2.2□□□□□ -2.06
SKP1-208ENST00000521216 LST1O00453 97 aa2.2□□□□□ -2.06
SKP1-208ENST00000521216 CCKP06307 115 aa2.2□□□□□ -2.06
SKP1-208ENST00000521216 MGST1P10620 155 aaKnown RBP2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms