RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 F8W1H4 67 aa6.22□□□□□ -1.41
CTNNA1-210ENST00000518825 SMCPP49901 116 aaPredicted RBP6.22□□□□□ -1.41
CTNNA1-210ENST00000518825 INSL3P51460 131 aa6.22□□□□□ -1.41
CTNNA1-210ENST00000518825 ZNF462Q96JM2 2506 aa6.22□□□□□ -1.41
CTNNA1-210ENST00000518825 ACACBO00763 2458 aa6.22□□□□□ -1.41
CTNNA1-210ENST00000518825 PTPN13Q12923 2485 aa6.22□□□□□ -1.41
CTNNA1-210ENST00000518825 IGHV1OR15-1A0A075B7D0 117 aa6.22□□□□□ -1.41
CTNNA1-210ENST00000518825 HOXA3O43365 443 aaPredicted RBP6.22□□□□□ -1.41
CTNNA1-210ENST00000518825 EIF4EBP3O60516 100 aaPredicted RBP6.22□□□□□ -1.41
CTNNA1-210ENST00000518825 ZNF702PQ9H963 129 aa6.22□□□□□ -1.41
CTNNA1-210ENST00000518825 PGPEP1Q9NXJ5 209 aa6.22□□□□□ -1.41
CTNNA1-210ENST00000518825 SS18L2Q9UHA2 77 aa6.22□□□□□ -1.41
CTNNA1-210ENST00000518825 USP24Q9UPU5 2620 aa6.22□□□□□ -1.41
CTNNA1-210ENST00000518825 CHD6Q8TD26 2715 aa6.22□□□□□ -1.41
CTNNA1-210ENST00000518825 PROK1P58294 105 aa6.21□□□□□ -1.41
CTNNA1-210ENST00000518825 HERV-K104P63124 156 aa6.21□□□□□ -1.41
CTNNA1-210ENST00000518825 ETDBQ3ZM63 59 aa6.21□□□□□ -1.41
CTNNA1-210ENST00000518825 HIST2H2BDQ6DRA6 164 aa6.21□□□□□ -1.41
CTNNA1-210ENST00000518825 TMEM141Q96I45 108 aa6.21□□□□□ -1.41
CTNNA1-210ENST00000518825 KIR2DL4Q99706 377 aa6.21□□□□□ -1.41
CTNNA1-210ENST00000518825 LINC01549A6NIU2 74 aa6.21□□□□□ -1.42
CTNNA1-210ENST00000518825 TSPAN13O95857 204 aa6.21□□□□□ -1.42
CTNNA1-210ENST00000518825 HOXD3P31249 432 aaPredicted RBP6.21□□□□□ -1.42
CTNNA1-210ENST00000518825 SFTA2Q6UW10 78 aa6.21□□□□□ -1.42
CTNNA1-210ENST00000518825 RNF152Q8N8N0 203 aa6.21□□□□□ -1.42
CTNNA1-210ENST00000518825 IGHV3-30P01768 117 aa6.21□□□□□ -1.42
CTNNA1-210ENST00000518825 IGHV3-30-5P0DP03 117 aa6.21□□□□□ -1.42
CTNNA1-210ENST00000518825 SNRPD3P62318 126 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-210ENST00000518825 ZNF56Q15929 161 aa6.21□□□□□ -1.42
CTNNA1-210ENST00000518825 SCGB1D4Q6XE38 83 aa6.21□□□□□ -1.42
CTNNA1-210ENST00000518825 LINC01356Q8N9X3 169 aa6.21□□□□□ -1.42
CTNNA1-210ENST00000518825 FAM208BQ5VWN6 2430 aa6.2□□□□□ -1.42
CTNNA1-210ENST00000518825 RBMY1BA6NDE4 496 aaKnown RBP6.2□□□□□ -1.42
CTNNA1-210ENST00000518825 RBMY1EA6NEQ0 496 aaKnown RBP6.2□□□□□ -1.42
CTNNA1-210ENST00000518825 FSHBP01225 129 aa6.2□□□□□ -1.42
CTNNA1-210ENST00000518825 RBMY1DP0C7P1 496 aaKnown RBP6.2□□□□□ -1.42
CTNNA1-210ENST00000518825 GATA3P23771 443 aa6.2□□□□□ -1.42
CTNNA1-210ENST00000518825 CKS1BP61024 79 aa6.2□□□□□ -1.42
CTNNA1-210ENST00000518825 DEFB136Q30KP8 78 aa6.2□□□□□ -1.42
CTNNA1-210ENST00000518825 NSUN5P1Q3KNT7 163 aa6.2□□□□□ -1.42
CTNNA1-210ENST00000518825 SPAG8Q99932 426 aaPredicted RBP6.2□□□□□ -1.42
CTNNA1-210ENST00000518825 NACAE9PAV3 2078 aa6.2□□□□□ -1.42
CTNNA1-210ENST00000518825 MYO9AB2RTY4 2548 aa6.2□□□□□ -1.42
CTNNA1-210ENST00000518825 TMEM89A2RUT3 159 aa6.2□□□□□ -1.42
CTNNA1-210ENST00000518825 APCP25054 2843 aa6.2□□□□□ -1.42
CTNNA1-210ENST00000518825 CR1P17927 2039 aa6.2□□□□□ -1.42
CTNNA1-210ENST00000518825 KNCNA6PVL3 124 aa6.2□□□□□ -1.42
CTNNA1-210ENST00000518825 TGFAP01135 160 aa6.2□□□□□ -1.42
CTNNA1-210ENST00000518825 TMEM170BQ5T4T1 132 aa6.2□□□□□ -1.42
CTNNA1-210ENST00000518825 NFE4Q86UQ8 179 aa6.2□□□□□ -1.42
CTNNA1-210ENST00000518825 SLC25A29Q8N8R3 303 aa6.2□□□□□ -1.42
CTNNA1-210ENST00000518825 EPG5Q9HCE0 2579 aa6.19□□□□□ -1.42
CTNNA1-210ENST00000518825 CFC1BP0CG36 223 aa6.19□□□□□ -1.42
CTNNA1-210ENST00000518825 CFC1P0CG37 223 aa6.19□□□□□ -1.42
CTNNA1-210ENST00000518825 UBE2D3P61077 147 aa6.19□□□□□ -1.42
CTNNA1-210ENST00000518825 UBE2D2P62837 147 aa6.19□□□□□ -1.42
CTNNA1-210ENST00000518825 GAGE13Q4V321 117 aa6.19□□□□□ -1.42
CTNNA1-210ENST00000518825 Q6ZSN1 163 aa6.19□□□□□ -1.42
CTNNA1-210ENST00000518825 NDUFA11Q86Y39 141 aa6.19□□□□□ -1.42
CTNNA1-210ENST00000518825 C20orf203Q8NBC4 194 aa6.19□□□□□ -1.42
CTNNA1-210ENST00000518825 IGHV3-73A0A0B4J1V6 119 aa6.19□□□□□ -1.42
CTNNA1-210ENST00000518825 SLURP1P55000 103 aa6.19□□□□□ -1.42
CTNNA1-210ENST00000518825 SRSF9Q13242 221 aaKnown RBP eCLIP6.19□□□□□ -1.42
CTNNA1-210ENST00000518825 BEX4Q9NWD9 120 aaPredicted RBP6.19□□□□□ -1.42
CTNNA1-210ENST00000518825 MRPL16Q9NX20 251 aaKnown RBP6.19□□□□□ -1.42
CTNNA1-210ENST00000518825 VPREB3Q9UKI3 123 aa6.19□□□□□ -1.42
CTNNA1-210ENST00000518825 IGLV4-3A0A075B6K6 122 aa6.19□□□□□ -1.42
CTNNA1-210ENST00000518825 TMEM223A0PJW6 202 aa6.19□□□□□ -1.42
CTNNA1-210ENST00000518825 CFAP126Q5VTH2 177 aa6.19□□□□□ -1.42
CTNNA1-210ENST00000518825 Q6YL49 198 aa6.19□□□□□ -1.42
CTNNA1-210ENST00000518825 TRPT1Q86TN4 253 aaKnown RBP6.19□□□□□ -1.42
CTNNA1-210ENST00000518825 J3QQQ9 107 aa6.18□□□□□ -1.42
CTNNA1-210ENST00000518825 AZU1P20160 251 aa6.18□□□□□ -1.42
CTNNA1-210ENST00000518825 KRTAP10-9P60411 292 aa6.18□□□□□ -1.42
CTNNA1-210ENST00000518825 TCTEX1D4Q5JR98 221 aa6.18□□□□□ -1.42
CTNNA1-210ENST00000518825 UBE2E2Q96LR5 201 aa6.18□□□□□ -1.42
CTNNA1-210ENST00000518825 APOMO95445 188 aa6.18□□□□□ -1.42
CTNNA1-210ENST00000518825 PRB1P04280 392 aa6.18□□□□□ -1.42
CTNNA1-210ENST00000518825 ZNF22P17026 224 aaPredicted RBP6.18□□□□□ -1.42
CTNNA1-210ENST00000518825 PAPPA-AS1Q5QFB9 102 aa6.18□□□□□ -1.42
CTNNA1-210ENST00000518825 CEMP1Q6PRD7 247 aaPredicted RBP6.18□□□□□ -1.42
CTNNA1-210ENST00000518825 DUX3Q96PT4 197 aa6.18□□□□□ -1.42
CTNNA1-210ENST00000518825 TSSC4Q9Y5U2 329 aaPredicted RBP6.18□□□□□ -1.42
CTNNA1-210ENST00000518825 IGHV3-64A0A075B6Q5 118 aa6.17□□□□□ -1.42
CTNNA1-210ENST00000518825 A0A0J9YXV3 536 aa6.17□□□□□ -1.42
CTNNA1-210ENST00000518825 DSCR9P59020 149 aa6.17□□□□□ -1.42
CTNNA1-210ENST00000518825 RHOHQ15669 191 aa6.17□□□□□ -1.42
CTNNA1-210ENST00000518825 SYT8Q8NBV8 401 aa6.17□□□□□ -1.42
CTNNA1-210ENST00000518825 I3L3M4 83 aa6.17□□□□□ -1.42
CTNNA1-210ENST00000518825 HTN1P15515 57 aa6.17□□□□□ -1.42
CTNNA1-210ENST00000518825 NAV2Q8IVL1 2488 aa6.17□□□□□ -1.42
CTNNA1-210ENST00000518825 A8MTW9 85 aa6.17□□□□□ -1.42
CTNNA1-210ENST00000518825 ELANEP08246 267 aa6.17□□□□□ -1.42
CTNNA1-210ENST00000518825 C10orf126Q8N4M7 172 aa6.17□□□□□ -1.42
CTNNA1-210ENST00000518825 TLN2Q9Y4G6 2542 aa6.16□□□□□ -1.42
CTNNA1-210ENST00000518825 H3BMM0 161 aa6.16□□□□□ -1.42
CTNNA1-210ENST00000518825 RHODO00212 210 aa6.16□□□□□ -1.42
CTNNA1-210ENST00000518825 IGHV4-31P0DP07 118 aa6.16□□□□□ -1.42
CTNNA1-210ENST00000518825 HERVK_113P61574 105 aa6.16□□□□□ -1.42
CTNNA1-210ENST00000518825 PTH2Q96A98 100 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms