RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 TRAV26-2A0A0B4J265 109 aa13.67□□□□□ -0.22
SDC2-202ENST00000518385 MORN3Q6PF18 240 aaPredicted RBP13.67□□□□□ -0.22
SDC2-202ENST00000518385 TIMM17AQ99595 171 aa13.67□□□□□ -0.22
SDC2-202ENST00000518385 PRSS29PA6NIE9 313 aa13.66□□□□□ -0.22
SDC2-202ENST00000518385 ZNF815PA8K554 130 aa13.66□□□□□ -0.22
SDC2-202ENST00000518385 ETDBQ3ZM63 59 aa13.66□□□□□ -0.22
SDC2-202ENST00000518385 CFAP126Q5VTH2 177 aa13.66□□□□□ -0.22
SDC2-202ENST00000518385 CRLF1O75462 422 aa13.66□□□□□ -0.22
SDC2-202ENST00000518385 APOMO95445 188 aa13.66□□□□□ -0.22
SDC2-202ENST00000518385 UBE2D3P61077 147 aa13.66□□□□□ -0.22
SDC2-202ENST00000518385 UBE2D2P62837 147 aa13.66□□□□□ -0.22
SDC2-202ENST00000518385 GTSF1LQ9H1H1 148 aa13.66□□□□□ -0.22
SDC2-202ENST00000518385 MRPL16Q9NX20 251 aaKnown RBP13.66□□□□□ -0.22
SDC2-202ENST00000518385 PGPEP1Q9NXJ5 209 aa13.66□□□□□ -0.22
SDC2-202ENST00000518385 C16orf95Q9H693 158 aa13.65□□□□□ -0.22
SDC2-202ENST00000518385 C11orf86A6NJI1 115 aa13.64□□□□□ -0.23
SDC2-202ENST00000518385 FOXI1Q12951 378 aa13.64□□□□□ -0.23
SDC2-202ENST00000518385 PMVKQ15126 192 aa13.64□□□□□ -0.23
SDC2-202ENST00000518385 SCGB1D4Q6XE38 83 aa13.64□□□□□ -0.23
SDC2-202ENST00000518385 DCANP1Q8TF63 244 aa13.64□□□□□ -0.23
SDC2-202ENST00000518385 VCYO14598 125 aa13.63□□□□□ -0.23
SDC2-202ENST00000518385 HOXD3P31249 432 aaPredicted RBP13.63□□□□□ -0.23
SDC2-202ENST00000518385 SRSF9Q13242 221 aaKnown RBP eCLIP13.63□□□□□ -0.23
SDC2-202ENST00000518385 C4orf3Q8WVX3 66 aa13.63□□□□□ -0.23
SDC2-202ENST00000518385 TRBV6-5A0A0K0K1A5 114 aa13.62□□□□□ -0.23
SDC2-202ENST00000518385 SMAGPQ0VAQ4 97 aa13.62□□□□□ -0.23
SDC2-202ENST00000518385 SBSPONQ8IVN8 264 aa13.62□□□□□ -0.23
SDC2-202ENST00000518385 PPDPFLQ8WWR9 84 aa13.62□□□□□ -0.23
SDC2-202ENST00000518385 SYNJ2BPP57105 145 aa13.62□□□□□ -0.23
SDC2-202ENST00000518385 PRR9Q5T870 116 aa13.62□□□□□ -0.23
SDC2-202ENST00000518385 NDUFA7O95182 113 aa13.61□□□□□ -0.23
SDC2-202ENST00000518385 SNRPD3P62318 126 aaKnown RBP13.61□□□□□ -0.23
SDC2-202ENST00000518385 ANXA2RQ3ZCQ2 193 aa13.61□□□□□ -0.23
SDC2-202ENST00000518385 SH2D6Q7Z4S9 175 aa13.61□□□□□ -0.23
SDC2-202ENST00000518385 ODF3Q96PU9 254 aa13.61□□□□□ -0.23
SDC2-202ENST00000518385 KIR2DL4Q99706 377 aa13.61□□□□□ -0.23
SDC2-202ENST00000518385 CD7P09564 240 aa13.6□□□□□ -0.23
SDC2-202ENST00000518385 POLR2KP53803 58 aaKnown RBP13.6□□□□□ -0.23
SDC2-202ENST00000518385 C14orf178Q8N769 122 aaPredicted RBP13.6□□□□□ -0.23
SDC2-202ENST00000518385 PEMTQ9UBM1 199 aa13.6□□□□□ -0.23
SDC2-202ENST00000518385 FN1P02751 2386 aaKnown RBP13.6□□□□□ -0.23
SDC2-202ENST00000518385 SETXQ7Z333 2677 aaKnown RBP13.59□□□□□ -0.23
SDC2-202ENST00000518385 IGIPA6NJ69 53 aa13.59□□□□□ -0.23
SDC2-202ENST00000518385 TMEM262E9PQX1 116 aa13.59□□□□□ -0.23
SDC2-202ENST00000518385 MGPP08493 103 aa13.59□□□□□ -0.23
SDC2-202ENST00000518385 RHOHQ15669 191 aa13.59□□□□□ -0.23
SDC2-202ENST00000518385 TEN1Q86WV5 123 aa13.59□□□□□ -0.23
SDC2-202ENST00000518385 LINC01006Q8NI28 216 aa13.59□□□□□ -0.23
SDC2-202ENST00000518385 SELENOKQ9Y6D0 94 aa13.59□□□□□ -0.23
SDC2-202ENST00000518385 KIF25-AS1Q9Y6Z4 181 aa13.59□□□□□ -0.23
SDC2-202ENST00000518385 NSD1Q96L73 2696 aaPredicted RBP13.59□□□□□ -0.23
SDC2-202ENST00000518385 TRAV2A0A0B4J234 112 aa13.58□□□□□ -0.23
SDC2-202ENST00000518385 A0A0J9YY99 117 aa13.58□□□□□ -0.23
SDC2-202ENST00000518385 K7EQG2 157 aa13.58□□□□□ -0.23
SDC2-202ENST00000518385 TSPAN13O95857 204 aa13.58□□□□□ -0.23
SDC2-202ENST00000518385 AMTNQ6UX39 209 aa13.58□□□□□ -0.23
SDC2-202ENST00000518385 SLC25A29Q8N8R3 303 aa13.58□□□□□ -0.23
SDC2-202ENST00000518385 F8P00451 2351 aa13.58□□□□□ -0.24
SDC2-202ENST00000518385 RNASE3P12724 160 aaKnown RBP13.58□□□□□ -0.24
SDC2-202ENST00000518385 NDUFA11Q86Y39 141 aa13.58□□□□□ -0.24
SDC2-202ENST00000518385 RPL39LQ96EH5 51 aaKnown RBP13.58□□□□□ -0.24
SDC2-202ENST00000518385 CUBNO60494 3623 aa13.57□□□□□ -0.24
SDC2-202ENST00000518385 IGKV3-7A0A075B6H7 116 aa13.57□□□□□ -0.24
SDC2-202ENST00000518385 IGLV4-69A0A075B6H9 119 aa13.57□□□□□ -0.24
SDC2-202ENST00000518385 KLLNB2CW77 178 aa13.57□□□□□ -0.24
SDC2-202ENST00000518385 ZFP2Q6ZN57 461 aa13.57□□□□□ -0.24
SDC2-202ENST00000518385 NFE4Q86UQ8 179 aa13.57□□□□□ -0.24
SDC2-202ENST00000518385 TRBV27A0A0K0K1C4 114 aa13.56□□□□□ -0.24
SDC2-202ENST00000518385 CRYGDP07320 174 aa13.56□□□□□ -0.24
SDC2-202ENST00000518385 EDN2P20800 178 aa13.56□□□□□ -0.24
SDC2-202ENST00000518385 CRYBA4P53673 196 aa13.56□□□□□ -0.24
SDC2-202ENST00000518385 C10orf126Q8N4M7 172 aa13.56□□□□□ -0.24
SDC2-202ENST00000518385 LINC01600Q96MT4 127 aa13.56□□□□□ -0.24
SDC2-202ENST00000518385 A8MWV9 139 aa13.55□□□□□ -0.24
SDC2-202ENST00000518385 LINC00315P59091 139 aa13.55□□□□□ -0.24
SDC2-202ENST00000518385 ZNF876PQ49A33 203 aa13.55□□□□□ -0.24
SDC2-202ENST00000518385 A0A0J9YX75 114 aa13.54□□□□□ -0.24
SDC2-202ENST00000518385 DUSP14O95147 198 aaKnown RBP13.54□□□□□ -0.24
SDC2-202ENST00000518385 RNASE4P34096 147 aaKnown RBP13.54□□□□□ -0.24
SDC2-202ENST00000518385 CKS1BP61024 79 aa13.54□□□□□ -0.24
SDC2-202ENST00000518385 FAM159AQ6UWV7 190 aa13.54□□□□□ -0.24
SDC2-202ENST00000518385 SYT8Q8NBV8 401 aa13.54□□□□□ -0.24
SDC2-202ENST00000518385 TP53TG1Q9Y2A0 90 aa13.54□□□□□ -0.24
SDC2-202ENST00000518385 AGRNO00468 2067 aa13.54□□□□□ -0.24
SDC2-202ENST00000518385 IGHV3-30P01768 117 aa13.54□□□□□ -0.24
SDC2-202ENST00000518385 IGHV3-30-5P0DP03 117 aa13.54□□□□□ -0.24
SDC2-202ENST00000518385 PSMB2P49721 201 aa13.54□□□□□ -0.24
SDC2-202ENST00000518385 NSUN5P1Q3KNT7 163 aa13.54□□□□□ -0.24
SDC2-202ENST00000518385 PRO1854Q9UHT4 67 aa13.54□□□□□ -0.24
SDC2-202ENST00000518385 NF1P21359 2839 aa13.53□□□□□ -0.24
SDC2-202ENST00000518385 A0A0B4J2C4 111 aa13.53□□□□□ -0.24
SDC2-202ENST00000518385 LOC107984156A0A0G2JMH3 177 aa13.53□□□□□ -0.24
SDC2-202ENST00000518385 LEPROTO15243 131 aa13.53□□□□□ -0.24
SDC2-202ENST00000518385 SMCPP49901 116 aaPredicted RBP13.53□□□□□ -0.24
SDC2-202ENST00000518385 ARL17AQ8IVW1 177 aa13.53□□□□□ -0.24
SDC2-202ENST00000518385 PLEKHB2Q96CS7 222 aa13.53□□□□□ -0.24
SDC2-202ENST00000518385 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.52□□□□□ -0.25
SDC2-202ENST00000518385 F6UB75 175 aa13.52□□□□□ -0.25
SDC2-202ENST00000518385 P0DMU3 169 aa13.52□□□□□ -0.25
SDC2-202ENST00000518385 FAM231AP0DMU4 169 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms