RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 SH2D6Q7Z4S9 175 aa5.62□□□□□ -1.51
PABPC1-202ENST00000517403 SFRP2Q96HF1 295 aa5.62□□□□□ -1.51
PABPC1-202ENST00000517403 DERL1Q9BUN8 251 aa5.62□□□□□ -1.51
PABPC1-202ENST00000517403 KLK12Q9UKR0 248 aa5.62□□□□□ -1.51
PABPC1-202ENST00000517403 TRBV6-1A0A0K0K1D8 114 aa5.61□□□□□ -1.51
PABPC1-202ENST00000517403 FABP5P3A8MUU1 101 aa5.61□□□□□ -1.51
PABPC1-202ENST00000517403 A8MWV9 139 aa5.61□□□□□ -1.51
PABPC1-202ENST00000517403 CCL20P78556 96 aa5.61□□□□□ -1.51
PABPC1-202ENST00000517403 ZFP69Q49AA0 526 aa5.61□□□□□ -1.51
PABPC1-202ENST00000517403 MPV17L2Q567V2 206 aa5.61□□□□□ -1.51
PABPC1-202ENST00000517403 SAPCD1Q5SSQ6 148 aa5.61□□□□□ -1.51
PABPC1-202ENST00000517403 PRR27Q6MZM9 219 aa5.61□□□□□ -1.51
PABPC1-202ENST00000517403 ATRAIDQ6UW56 229 aa5.61□□□□□ -1.51
PABPC1-202ENST00000517403 NEXN-AS1Q8NBZ9 246 aa5.61□□□□□ -1.51
PABPC1-202ENST00000517403 MLST8Q9BVC4 326 aa5.61□□□□□ -1.51
PABPC1-202ENST00000517403 KIF25-AS1Q9Y6Z4 181 aa5.61□□□□□ -1.51
PABPC1-202ENST00000517403 K7EQM0 130 aa5.6□□□□□ -1.51
PABPC1-202ENST00000517403 IGLV2-8P01709 118 aa5.6□□□□□ -1.51
PABPC1-202ENST00000517403 MBP02144 154 aa5.6□□□□□ -1.51
PABPC1-202ENST00000517403 S100A4P26447 101 aaKnown RBP5.6□□□□□ -1.51
PABPC1-202ENST00000517403 PIK3CD-AS1Q5SR53 167 aa5.6□□□□□ -1.51
PABPC1-202ENST00000517403 Q8N976 141 aa5.6□□□□□ -1.51
PABPC1-202ENST00000517403 DEFB104AQ8WTQ1 72 aa5.6□□□□□ -1.51
PABPC1-202ENST00000517403 ZNF471Q9BX82 626 aaPredicted RBP5.6□□□□□ -1.51
PABPC1-202ENST00000517403 GFRA4Q9GZZ7 299 aa5.6□□□□□ -1.51
PABPC1-202ENST00000517403 TRBV20OR9-2A0A075B6H5 130 aa5.59□□□□□ -1.51
PABPC1-202ENST00000517403 BORCS7-ASMTA0A0B4J1R7 106 aa5.59□□□□□ -1.51
PABPC1-202ENST00000517403 RBFOX3A6NFN3 312 aa5.59□□□□□ -1.51
PABPC1-202ENST00000517403 SNAI2O43623 268 aa5.59□□□□□ -1.51
PABPC1-202ENST00000517403 GZMBP10144 247 aa5.59□□□□□ -1.51
PABPC1-202ENST00000517403 AKR1C8PQ5T2L2 129 aa5.59□□□□□ -1.51
PABPC1-202ENST00000517403 FAM162BQ5T6X4 162 aa5.59□□□□□ -1.51
PABPC1-202ENST00000517403 CLPSL2Q6UWE3 100 aa5.59□□□□□ -1.51
PABPC1-202ENST00000517403 KCNRGQ8N5I3 272 aa5.59□□□□□ -1.51
PABPC1-202ENST00000517403 INO80EQ8NBZ0 244 aaPredicted RBP5.59□□□□□ -1.51
PABPC1-202ENST00000517403 CIRBP-AS1Q8TBR5 109 aa5.59□□□□□ -1.51
PABPC1-202ENST00000517403 HIST1H2BAQ96A08 127 aa5.59□□□□□ -1.51
PABPC1-202ENST00000517403 UBE2WQ96B02 151 aa5.59□□□□□ -1.51
PABPC1-202ENST00000517403 FMC1Q96HJ9 113 aa5.59□□□□□ -1.51
PABPC1-202ENST00000517403 IGKV2D-24A0A075B6R9 120 aa5.58□□□□□ -1.52
PABPC1-202ENST00000517403 CIDEAO60543 219 aa5.58□□□□□ -1.52
PABPC1-202ENST00000517403 VPREB1P12018 145 aa5.58□□□□□ -1.52
PABPC1-202ENST00000517403 AKR1C3P42330 323 aa5.58□□□□□ -1.52
PABPC1-202ENST00000517403 OR10G8Q8NGN5 311 aa5.58□□□□□ -1.52
PABPC1-202ENST00000517403 FAM213BQ8TBF2 198 aa5.58□□□□□ -1.52
PABPC1-202ENST00000517403 MBD3L1Q8WWY6 194 aa5.58□□□□□ -1.52
PABPC1-202ENST00000517403 KRTAP9-9Q9BYP9 154 aa5.58□□□□□ -1.52
PABPC1-202ENST00000517403 KRTAP9-4Q9BYQ2 154 aa5.58□□□□□ -1.52
PABPC1-202ENST00000517403 BATF3Q9NR55 127 aa5.58□□□□□ -1.52
PABPC1-202ENST00000517403 KRTAP29-1A8MX34 341 aaPredicted RBP5.57□□□□□ -1.52
PABPC1-202ENST00000517403 RHODO00212 210 aa5.57□□□□□ -1.52
PABPC1-202ENST00000517403 SSTP61278 116 aa5.57□□□□□ -1.52
PABPC1-202ENST00000517403 ZFP30Q9Y2G7 519 aa5.57□□□□□ -1.52
PABPC1-202ENST00000517403 TRBV6-8A0A0A6YYG3 113 aa5.56□□□□□ -1.52
PABPC1-202ENST00000517403 TRAV8-3A0A0A6YYJ7 113 aa5.56□□□□□ -1.52
PABPC1-202ENST00000517403 PRSS1P07477 247 aa5.56□□□□□ -1.52
PABPC1-202ENST00000517403 IGLC6P0CF74 106 aa5.56□□□□□ -1.52
PABPC1-202ENST00000517403 TPT1P13693 172 aaKnown RBP5.56□□□□□ -1.52
PABPC1-202ENST00000517403 UBE2G1P62253 170 aa5.56□□□□□ -1.52
PABPC1-202ENST00000517403 ZNF56Q15929 161 aa5.56□□□□□ -1.52
PABPC1-202ENST00000517403 WDR73Q6P4I2 378 aa5.56□□□□□ -1.52
PABPC1-202ENST00000517403 ZFP82Q8N141 532 aa5.56□□□□□ -1.52
PABPC1-202ENST00000517403 C15orf54Q8N8G6 183 aa5.56□□□□□ -1.52
PABPC1-202ENST00000517403 SFT2D1Q8WV19 159 aa5.56□□□□□ -1.52
PABPC1-202ENST00000517403 CHAC1Q9BUX1 264 aa5.56□□□□□ -1.52
PABPC1-202ENST00000517403 PHLDA3Q9Y5J5 127 aa5.56□□□□□ -1.52
PABPC1-202ENST00000517403 TRBV7-3A0A075B6L6 115 aa5.55□□□□□ -1.52
PABPC1-202ENST00000517403 A0A087WWC5 75 aa5.55□□□□□ -1.52
PABPC1-202ENST00000517403 BCL2L11O43521 198 aa5.55□□□□□ -1.52
PABPC1-202ENST00000517403 SLPIP03973 132 aa5.55□□□□□ -1.52
PABPC1-202ENST00000517403 ZNF345Q14585 488 aa5.55□□□□□ -1.52
PABPC1-202ENST00000517403 C11orf52Q96A22 123 aa5.55□□□□□ -1.52
PABPC1-202ENST00000517403 PRR34Q9NV39 138 aa5.55□□□□□ -1.52
PABPC1-202ENST00000517403 IGLV4-60A0A075B6I1 120 aa5.54□□□□□ -1.52
PABPC1-202ENST00000517403 TRBV10-1A0A0K0K1A3 114 aa5.54□□□□□ -1.52
PABPC1-202ENST00000517403 RAB19A4D1S5 217 aa5.54□□□□□ -1.52
PABPC1-202ENST00000517403 C19orf71A6NCJ1 209 aa5.54□□□□□ -1.52
PABPC1-202ENST00000517403 HLA-DQA1P01909 254 aa5.54□□□□□ -1.52
PABPC1-202ENST00000517403 CXCL1P09341 107 aa5.54□□□□□ -1.52
PABPC1-202ENST00000517403 OR5AL1P0C617 328 aa5.54□□□□□ -1.52
PABPC1-202ENST00000517403 SEC11BP0C7V7 166 aa5.54□□□□□ -1.52
PABPC1-202ENST00000517403 MT1HL1P0DM35 61 aa5.54□□□□□ -1.52
PABPC1-202ENST00000517403 RPL35P42766 123 aaKnown RBP5.54□□□□□ -1.52
PABPC1-202ENST00000517403 RBX1P62877 108 aa5.54□□□□□ -1.52
PABPC1-202ENST00000517403 RGS21Q2M5E4 152 aa5.54□□□□□ -1.52
PABPC1-202ENST00000517403 CENPWQ5EE01 88 aa5.54□□□□□ -1.52
PABPC1-202ENST00000517403 C20orf203Q8NBC4 194 aa5.54□□□□□ -1.52
PABPC1-202ENST00000517403 VAX2Q9UIW0 290 aa5.54□□□□□ -1.52
PABPC1-202ENST00000517403 M0QY20 66 aa5.53□□□□□ -1.52
PABPC1-202ENST00000517403 CHTF8P0CG12 524 aa5.53□□□□□ -1.52
PABPC1-202ENST00000517403 RAB4BP61018 213 aa5.53□□□□□ -1.52
PABPC1-202ENST00000517403 RPL36AP83881 106 aaKnown RBP5.53□□□□□ -1.52
PABPC1-202ENST00000517403 GAGE6Q13070 117 aa5.53□□□□□ -1.52
PABPC1-202ENST00000517403 SUMO4Q6EEV6 95 aa5.53□□□□□ -1.52
PABPC1-202ENST00000517403 BAGE2Q86Y30 109 aa5.53□□□□□ -1.52
PABPC1-202ENST00000517403 STOML3Q8TAV4 291 aa5.53□□□□□ -1.52
PABPC1-202ENST00000517403 RPL36ALQ969Q0 106 aaKnown RBP5.53□□□□□ -1.52
PABPC1-202ENST00000517403 NKX6-2Q9C056 277 aaPredicted RBP5.53□□□□□ -1.52
PABPC1-202ENST00000517403 IGLV10-54A0A075B6I4 117 aa5.52□□□□□ -1.53
PABPC1-202ENST00000517403 KRTAP4-8A0A0G2JLE6 195 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms