RNA–Protein interactions for RNA: ENST00000514600.5

LINC00616-205, long intergenic non-protein coding RNA 616, humanhuman

TSL 1 (best) BASIC

Gene LINC00616, Length 2,017 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-205ENST00000514600 F2Z2F3 143 aa4.11□□□□□ -1.75
LINC00616-205ENST00000514600 HOXB6P17509 224 aaKnown RBP4.11□□□□□ -1.75
LINC00616-205ENST00000514600 CD24P25063 80 aa4.11□□□□□ -1.75
LINC00616-205ENST00000514600 SNRPFP62306 86 aaKnown RBP4.11□□□□□ -1.75
LINC00616-205ENST00000514600 EYSQ5T1H1 3165 aa4.11□□□□□ -1.75
LINC00616-205ENST00000514600 ZCCHC23Q6ZST2 131 aa4.11□□□□□ -1.75
LINC00616-205ENST00000514600 DEFB123Q8N688 67 aa4.11□□□□□ -1.75
LINC00616-205ENST00000514600 PRO3102Q9H379 93 aa4.11□□□□□ -1.75
LINC00616-205ENST00000514600 NHP2Q9NX24 153 aaKnown RBP4.11□□□□□ -1.75
LINC00616-205ENST00000514600 TIMM9Q9Y5J7 89 aa4.11□□□□□ -1.75
LINC00616-205ENST00000514600 GTF3C1Q12789 2109 aa4.1□□□□□ -1.75
LINC00616-205ENST00000514600 TRAV13-2A0A0B4J235 113 aa4.1□□□□□ -1.75
LINC00616-205ENST00000514600 PIGBOS1A0A0B4J2F0 54 aa4.1□□□□□ -1.75
LINC00616-205ENST00000514600 TRBV10-2A0A0K0K1G8 114 aa4.1□□□□□ -1.75
LINC00616-205ENST00000514600 NDUFC1O43677 76 aa4.1□□□□□ -1.75
LINC00616-205ENST00000514600 NNATQ16517 81 aa4.1□□□□□ -1.75
LINC00616-205ENST00000514600 C9orf47Q6ZRZ4 202 aa4.1□□□□□ -1.75
LINC00616-205ENST00000514600 C9orf106Q8NAJ2 232 aa4.1□□□□□ -1.75
LINC00616-205ENST00000514600 SCRT1Q9BWW7 348 aa4.1□□□□□ -1.75
LINC00616-205ENST00000514600 KRTAP9-3Q9BYQ3 159 aa4.1□□□□□ -1.75
LINC00616-205ENST00000514600 TANC1Q9C0D5 1861 aa4.1□□□□□ -1.75
LINC00616-205ENST00000514600 PLXNA1Q9UIW2 1896 aa4.1□□□□□ -1.75
LINC00616-205ENST00000514600 SSC5DA1L4H1 1573 aa4.09□□□□□ -1.75
LINC00616-205ENST00000514600 IGKV1D-42A0A075B6H8 117 aa4.09□□□□□ -1.75
LINC00616-205ENST00000514600 A0A0G2JND7 137 aa4.09□□□□□ -1.75
LINC00616-205ENST00000514600 TCRBV4S1A1TA0A5B7 111 aa4.09□□□□□ -1.75
LINC00616-205ENST00000514600 CXCL8P10145 99 aa4.09□□□□□ -1.75
LINC00616-205ENST00000514600 C9orf129Q5T035 196 aaKnown RBP4.09□□□□□ -1.75
LINC00616-205ENST00000514600 TRAPPC1Q9Y5R8 145 aa4.09□□□□□ -1.75
LINC00616-205ENST00000514600 V9GYH0 126 aa4.09□□□□□ -1.75
LINC00616-205ENST00000514600 LHBP01229 141 aa4.09□□□□□ -1.76
LINC00616-205ENST00000514600 FXYD2P54710 66 aa4.09□□□□□ -1.76
LINC00616-205ENST00000514600 RPL36AP83881 106 aaKnown RBP4.09□□□□□ -1.76
LINC00616-205ENST00000514600 SLC48A1Q6P1K1 146 aa4.09□□□□□ -1.76
LINC00616-205ENST00000514600 FAM223AQ8IWN6 122 aa4.09□□□□□ -1.76
LINC00616-205ENST00000514600 ZNF355PQ9NSJ1 428 aa4.09□□□□□ -1.76
LINC00616-205ENST00000514600 SMAD5-AS1Q9Y6J3 95 aa4.09□□□□□ -1.76
LINC00616-205ENST00000514600 HCG22E2RYF7 251 aa4.08□□□□□ -1.76
LINC00616-205ENST00000514600 LINC01565O15544 149 aa4.08□□□□□ -1.76
LINC00616-205ENST00000514600 MGST1P10620 155 aaKnown RBP4.08□□□□□ -1.76
LINC00616-205ENST00000514600 C9orf116Q5BN46 136 aaPredicted RBP4.08□□□□□ -1.76
LINC00616-205ENST00000514600 BPESC1Q9GZL8 116 aa4.08□□□□□ -1.76
LINC00616-205ENST00000514600 TMEM14AQ9Y6G1 99 aa4.08□□□□□ -1.76
LINC00616-205ENST00000514600 PRUNE2Q8WUY3 3088 aa4.08□□□□□ -1.76
LINC00616-205ENST00000514600 SPTBN5Q9NRC6 3674 aaKnown RBP4.08□□□□□ -1.76
LINC00616-205ENST00000514600 MUC22E2RYF6 1773 aaPredicted RBP4.07□□□□□ -1.76
LINC00616-205ENST00000514600 H7C2G1 150 aa4.07□□□□□ -1.76
LINC00616-205ENST00000514600 TFF1P04155 84 aa4.07□□□□□ -1.76
LINC00616-205ENST00000514600 CFC1P0CG37 223 aa4.07□□□□□ -1.76
LINC00616-205ENST00000514600 TMEM105Q8N8V8 129 aa4.07□□□□□ -1.76
LINC00616-205ENST00000514600 LAMA2P24043 3122 aaKnown RBP4.07□□□□□ -1.76
LINC00616-205ENST00000514600 BAZ2BQ9UIF8 2168 aaKnown RBP4.07□□□□□ -1.76
LINC00616-205ENST00000514600 LAMB1P07942 1786 aa4.07□□□□□ -1.76
LINC00616-205ENST00000514600 MANBALQ9NQG1 85 aa4.07□□□□□ -1.76
LINC00616-205ENST00000514600 C11orf86A6NJI1 115 aa4.06□□□□□ -1.76
LINC00616-205ENST00000514600 H3BPC8 53 aa4.06□□□□□ -1.76
LINC00616-205ENST00000514600 EIF4EBP1Q13541 118 aaPredicted RBP4.06□□□□□ -1.76
LINC00616-205ENST00000514600 ZNF56Q15929 161 aa4.06□□□□□ -1.76
LINC00616-205ENST00000514600 CASC2Q6XLA1 102 aa4.06□□□□□ -1.76
LINC00616-205ENST00000514600 LINC00643Q86TS7 51 aa4.06□□□□□ -1.76
LINC00616-205ENST00000514600 MUC3AQ02505 3323 aa4.06□□□□□ -1.76
LINC00616-205ENST00000514600 DOCK11Q5JSL3 2073 aa4.06□□□□□ -1.76
LINC00616-205ENST00000514600 NINQ8N4C6 2090 aa4.06□□□□□ -1.76
LINC00616-205ENST00000514600 H3BQ85 93 aa4.05□□□□□ -1.76
LINC00616-205ENST00000514600 PANO1I0J062 215 aa4.05□□□□□ -1.76
LINC00616-205ENST00000514600 ACYP1P07311 99 aa4.05□□□□□ -1.76
LINC00616-205ENST00000514600 DSCR4P56555 118 aaPredicted RBP4.05□□□□□ -1.76
LINC00616-205ENST00000514600 A6NIN4 97 aa4.05□□□□□ -1.76
LINC00616-205ENST00000514600 IGLV2-11P01706 119 aa4.05□□□□□ -1.76
LINC00616-205ENST00000514600 C20orf166-AS1Q96NR2 134 aa4.05□□□□□ -1.76
LINC00616-205ENST00000514600 MGAMO43451 1857 aa4.05□□□□□ -1.76
LINC00616-205ENST00000514600 KLKP1Q107X0 134 aa4.04□□□□□ -1.76
LINC00616-205ENST00000514600 TMEM170BQ5T4T1 132 aa4.04□□□□□ -1.76
LINC00616-205ENST00000514600 FAM215AQ9Y5M1 114 aa4.04□□□□□ -1.76
LINC00616-205ENST00000514600 COL4A6Q14031 1691 aa4.04□□□□□ -1.76
LINC00616-205ENST00000514600 CDH23Q9H251 3354 aa4.04□□□□□ -1.76
LINC00616-205ENST00000514600 LTBP2Q14767 1821 aa4.04□□□□□ -1.76
LINC00616-205ENST00000514600 P0C880 135 aa4.04□□□□□ -1.76
LINC00616-205ENST00000514600 ZNF318Q5VUA4 2279 aa4.03□□□□□ -1.76
LINC00616-205ENST00000514600 A8MU10 97 aa4.03□□□□□ -1.76
LINC00616-205ENST00000514600 IGKV3-11P04433 115 aa4.03□□□□□ -1.76
LINC00616-205ENST00000514600 C3orf79P0CE67 100 aa4.03□□□□□ -1.76
LINC00616-205ENST00000514600 COX8AP10176 69 aa4.03□□□□□ -1.76
LINC00616-205ENST00000514600 IGLV3-21P80748 117 aaPredicted RBP4.03□□□□□ -1.76
LINC00616-205ENST00000514600 SPANXA2-OT1Q8N9U9 137 aa4.03□□□□□ -1.76
LINC00616-205ENST00000514600 CYP4F30PQ9H0H9 118 aa4.03□□□□□ -1.76
LINC00616-205ENST00000514600 CDC42SE1Q9NRR8 79 aa4.03□□□□□ -1.76
LINC00616-205ENST00000514600 MINOS1-NBL1R4GNA1 71 aa4.03□□□□□ -1.76
LINC00616-205ENST00000514600 PDCD11Q14690 1871 aaKnown RBP4.03□□□□□ -1.76
LINC00616-205ENST00000514600 MPDZO75970 2070 aa4.03□□□□□ -1.76
LINC00616-205ENST00000514600 PCSK5Q92824 1860 aa4.02□□□□□ -1.77
LINC00616-205ENST00000514600 DOCK9Q9BZ29 2069 aa4.02□□□□□ -1.77
LINC00616-205ENST00000514600 HEATR5BQ9P2D3 2071 aa4.02□□□□□ -1.77
LINC00616-205ENST00000514600 A0A0D9SFI3 127 aa4.02□□□□□ -1.77
LINC00616-205ENST00000514600 TRBV10-3A0A0K0K1G6 114 aa4.02□□□□□ -1.77
LINC00616-205ENST00000514600 IL4P05112 153 aa4.02□□□□□ -1.77
LINC00616-205ENST00000514600 SFTA2Q6UW10 78 aa4.02□□□□□ -1.77
LINC00616-205ENST00000514600 Q6ZR03 302 aa4.02□□□□□ -1.77
LINC00616-205ENST00000514600 VMO1Q7Z5L0 202 aa4.02□□□□□ -1.77
LINC00616-205ENST00000514600 C14orf132Q9NPU4 83 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms