RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-223ENST00000514402 SCAPERQ9BY12 1400 aa1.19□□□□□ -2.22
MATR3-223ENST00000514402 LINC00474Q9P2X8 69 aa1.19□□□□□ -2.22
MATR3-223ENST00000514402 DLEC1Q9Y238 1755 aa1.19□□□□□ -2.22
MATR3-223ENST00000514402 NWD2Q9ULI1 1742 aa1.18□□□□□ -2.22
MATR3-223ENST00000514402 EXPH5Q8NEV8 1989 aa1.18□□□□□ -2.22
MATR3-223ENST00000514402 ABCC5O15440 1437 aa1.18□□□□□ -2.22
MATR3-223ENST00000514402 MT-ATP8P03928 68 aa1.18□□□□□ -2.22
MATR3-223ENST00000514402 FXYD4P59646 89 aa1.18□□□□□ -2.22
MATR3-223ENST00000514402 UBA52P62987 128 aaKnown RBP1.18□□□□□ -2.22
MATR3-223ENST00000514402 DCDP81605 110 aaKnown RBP1.18□□□□□ -2.22
MATR3-223ENST00000514402 FXYD3Q14802 87 aa1.18□□□□□ -2.22
MATR3-223ENST00000514402 E9PCH4 1651 aa1.18□□□□□ -2.22
MATR3-223ENST00000514402 CHD3Q12873 2000 aaKnown RBP1.18□□□□□ -2.22
MATR3-223ENST00000514402 ABCA3Q99758 1704 aa1.18□□□□□ -2.22
MATR3-223ENST00000514402 TNS1Q9HBL0 1735 aaKnown RBP1.18□□□□□ -2.22
MATR3-223ENST00000514402 MYO18AQ92614 2054 aaKnown RBP1.17□□□□□ -2.22
MATR3-223ENST00000514402 INTS1Q8N201 2190 aaKnown RBP1.17□□□□□ -2.22
MATR3-223ENST00000514402 COL4A1P02462 1669 aa1.17□□□□□ -2.22
MATR3-223ENST00000514402 TOPAZ1Q8N9V7 1692 aa1.17□□□□□ -2.22
MATR3-223ENST00000514402 TEX49A0A1B0GTD5 131 aa1.17□□□□□ -2.22
MATR3-223ENST00000514402 SIX6O95475 246 aa1.17□□□□□ -2.22
MATR3-223ENST00000514402 ZNF818PQ6ZRF7 136 aa1.17□□□□□ -2.22
MATR3-223ENST00000514402 DEFB132Q7Z7B7 95 aa1.17□□□□□ -2.22
MATR3-223ENST00000514402 C20orf197Q8N268 126 aa1.17□□□□□ -2.22
MATR3-223ENST00000514402 TSLPQ969D9 159 aa1.17□□□□□ -2.22
MATR3-223ENST00000514402 CYSTM1Q9H1C7 97 aa1.17□□□□□ -2.22
MATR3-223ENST00000514402 AP4S1Q9Y587 144 aa1.17□□□□□ -2.22
MATR3-223ENST00000514402 LINC00312Q9Y6C7 94 aa1.17□□□□□ -2.22
MATR3-223ENST00000514402 CASP8AP2Q9UKL3 1982 aa1.17□□□□□ -2.22
MATR3-223ENST00000514402 TEX14Q8IWB6 1497 aa1.17□□□□□ -2.22
MATR3-223ENST00000514402 FYCO1Q9BQS8 1478 aa1.17□□□□□ -2.22
MATR3-223ENST00000514402 TET1Q8NFU7 2136 aa1.16□□□□□ -2.22
MATR3-223ENST00000514402 BLMP54132 1417 aaPredicted RBP1.16□□□□□ -2.22
MATR3-223ENST00000514402 TROQ12816 1431 aaPredicted RBP1.16□□□□□ -2.22
MATR3-223ENST00000514402 KDM6BO15054 1643 aa1.16□□□□□ -2.22
MATR3-223ENST00000514402 NRXN2Q9P2S2 1712 aa1.16□□□□□ -2.22
MATR3-223ENST00000514402 IGKV2-40A0A087WW87 121 aaPredicted RBP1.16□□□□□ -2.22
MATR3-223ENST00000514402 CLPSL1A2RUU4 121 aa1.16□□□□□ -2.22
MATR3-223ENST00000514402 H3BQ15 152 aa1.16□□□□□ -2.22
MATR3-223ENST00000514402 IGKV2D-40P01614 121 aaPredicted RBP1.16□□□□□ -2.22
MATR3-223ENST00000514402 CCL3L1P16619 93 aa1.16□□□□□ -2.22
MATR3-223ENST00000514402 GNG11P61952 73 aa1.16□□□□□ -2.22
MATR3-223ENST00000514402 XAF1Q6GPH4 301 aa1.16□□□□□ -2.22
MATR3-223ENST00000514402 C4orf33Q8N1A6 199 aa1.16□□□□□ -2.22
MATR3-223ENST00000514402 C5orf56Q8N8D9 126 aa1.16□□□□□ -2.22
MATR3-223ENST00000514402 FAM213BQ8TBF2 198 aa1.16□□□□□ -2.22
MATR3-223ENST00000514402 MYOZ3Q8TDC0 251 aa1.16□□□□□ -2.22
MATR3-223ENST00000514402 VAMP8Q9BV40 100 aa1.16□□□□□ -2.22
MATR3-223ENST00000514402 DPY30Q9C005 99 aa1.16□□□□□ -2.22
MATR3-223ENST00000514402 Q9H521 79 aa1.16□□□□□ -2.22
MATR3-223ENST00000514402 PATJQ8NI35 1801 aa1.16□□□□□ -2.22
MATR3-223ENST00000514402 ADGRL2O95490 1459 aa1.16□□□□□ -2.22
MATR3-223ENST00000514402 PPIP5K1Q6PFW1 1433 aa1.15□□□□□ -2.22
MATR3-223ENST00000514402 TRBV7-1A0A0A6YYK4 115 aa1.15□□□□□ -2.23
MATR3-223ENST00000514402 PVALEFA0A1B0GWK0 134 aa1.15□□□□□ -2.23
MATR3-223ENST00000514402 hADV29S1A0JD25 119 aa1.15□□□□□ -2.23
MATR3-223ENST00000514402 FXYD1O00168 92 aa1.15□□□□□ -2.23
MATR3-223ENST00000514402 GNGT2O14610 69 aa1.15□□□□□ -2.23
MATR3-223ENST00000514402 LINC00032P0C843 101 aa1.15□□□□□ -2.23
MATR3-223ENST00000514402 SSBP1Q04837 148 aaKnown RBP1.15□□□□□ -2.23
MATR3-223ENST00000514402 C10orf128Q5T292 105 aa1.15□□□□□ -2.23
MATR3-223ENST00000514402 LINC00208Q96KT6 92 aa1.15□□□□□ -2.23
MATR3-223ENST00000514402 CYP4F30PQ9H0H9 118 aa1.15□□□□□ -2.23
MATR3-223ENST00000514402 GOLGA3Q08378 1498 aa1.15□□□□□ -2.23
MATR3-223ENST00000514402 SHANK2Q9UPX8 1470 aa1.15□□□□□ -2.23
MATR3-223ENST00000514402 BAZ1AQ9NRL2 1556 aaPredicted RBP1.15□□□□□ -2.23
MATR3-223ENST00000514402 TET3O43151 1660 aa1.15□□□□□ -2.23
MATR3-223ENST00000514402 DOCK1Q14185 1865 aa1.15□□□□□ -2.23
MATR3-223ENST00000514402 NSD3Q9BZ95 1437 aa1.15□□□□□ -2.23
MATR3-223ENST00000514402 GAPVD1Q14C86 1478 aa1.14□□□□□ -2.23
MATR3-223ENST00000514402 SDK1Q7Z5N4 2213 aa1.14□□□□□ -2.23
MATR3-223ENST00000514402 Q6ZQY7 126 aa1.14□□□□□ -2.23
MATR3-223ENST00000514402 Q86TA4 180 aa1.14□□□□□ -2.23
MATR3-223ENST00000514402 ZGRF1Q86YA3 2104 aa1.14□□□□□ -2.23
MATR3-223ENST00000514402 C9orf62Q8N4C0 152 aa1.14□□□□□ -2.23
MATR3-223ENST00000514402 COX7B2Q8TF08 81 aa1.14□□□□□ -2.23
MATR3-223ENST00000514402 PMCHL2Q9BQD1 86 aa1.14□□□□□ -2.23
MATR3-223ENST00000514402 V9GYS6 101 aa1.14□□□□□ -2.23
MATR3-223ENST00000514402 MYH8P13535 1937 aa1.14□□□□□ -2.23
MATR3-223ENST00000514402 CHD1O14646 1710 aa1.14□□□□□ -2.23
MATR3-223ENST00000514402 PEAK1Q9H792 1746 aa1.14□□□□□ -2.23
MATR3-223ENST00000514402 LAMC3Q9Y6N6 1575 aa1.13□□□□□ -2.23
MATR3-223ENST00000514402 PLEKHH2Q8IVE3 1493 aa1.13□□□□□ -2.23
MATR3-223ENST00000514402 MAGI1Q96QZ7 1491 aaPredicted RBP1.13□□□□□ -2.23
MATR3-223ENST00000514402 PHIPQ8WWQ0 1821 aa1.13□□□□□ -2.23
MATR3-223ENST00000514402 ANKRD36BQ8N2N9 1353 aa1.13□□□□□ -2.23
MATR3-223ENST00000514402 NAP1L6A6NFF2 107 aa1.13□□□□□ -2.23
MATR3-223ENST00000514402 CRYM-AS1A6NIL9 109 aa1.13□□□□□ -2.23
MATR3-223ENST00000514402 ELOF1P60002 83 aaKnown RBP1.13□□□□□ -2.23
MATR3-223ENST00000514402 ZNF56Q15929 161 aa1.13□□□□□ -2.23
MATR3-223ENST00000514402 CCL19Q99731 98 aa1.13□□□□□ -2.23
MATR3-223ENST00000514402 KIAA0100Q14667 2235 aaKnown RBP1.13□□□□□ -2.23
MATR3-223ENST00000514402 SPAG17Q6Q759 2223 aa1.13□□□□□ -2.23
MATR3-223ENST00000514402 TRBV7-3A0A075B6L6 115 aa1.12□□□□□ -2.23
MATR3-223ENST00000514402 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.12□□□□□ -2.23
MATR3-223ENST00000514402 A0A087WTM6 91 aa1.12□□□□□ -2.23
MATR3-223ENST00000514402 A0A1W2PPM0 123 aa1.12□□□□□ -2.23
MATR3-223ENST00000514402 NCR3O14931 201 aa1.12□□□□□ -2.23
MATR3-223ENST00000514402 CAV3P56539 151 aa1.12□□□□□ -2.23
MATR3-223ENST00000514402 EDDM3BP56851 147 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms