RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 F8W735 103 aaPredicted RBP6.58□□□□□ -1.36
LIMCH1-209ENST00000509277 IFITM1P13164 125 aa6.58□□□□□ -1.36
LIMCH1-209ENST00000509277 Q6AWC8 147 aa6.58□□□□□ -1.36
LIMCH1-209ENST00000509277 C10orf126Q8N4M7 172 aa6.58□□□□□ -1.36
LIMCH1-209ENST00000509277 CDIP1Q9H305 208 aa6.58□□□□□ -1.36
LIMCH1-209ENST00000509277 KLF12Q9Y4X4 402 aa6.58□□□□□ -1.36
LIMCH1-209ENST00000509277 FBN1P35555 2871 aaKnown RBP6.58□□□□□ -1.36
LIMCH1-209ENST00000509277 A0A096LNJ9 63 aa6.57□□□□□ -1.36
LIMCH1-209ENST00000509277 E9PLD3 99 aa6.57□□□□□ -1.36
LIMCH1-209ENST00000509277 S100A4P26447 101 aaKnown RBP6.57□□□□□ -1.36
LIMCH1-209ENST00000509277 DEFB1P60022 68 aa6.57□□□□□ -1.36
LIMCH1-209ENST00000509277 LOC107984640A0A0U1RRK4 108 aa6.57□□□□□ -1.36
LIMCH1-209ENST00000509277 IGLV1-40P01703 118 aa6.57□□□□□ -1.36
LIMCH1-209ENST00000509277 FAM104BQ5XKR9 115 aa6.57□□□□□ -1.36
LIMCH1-209ENST00000509277 C15orf53Q8NAA6 179 aa6.57□□□□□ -1.36
LIMCH1-209ENST00000509277 PPDPFLQ8WWR9 84 aa6.57□□□□□ -1.36
LIMCH1-209ENST00000509277 SCGB3A1Q96QR1 104 aa6.57□□□□□ -1.36
LIMCH1-209ENST00000509277 TM2D2Q9BX73 214 aa6.57□□□□□ -1.36
LIMCH1-209ENST00000509277 INS-IGF2F8WCM5 200 aa6.57□□□□□ -1.36
LIMCH1-209ENST00000509277 CCL24O00175 119 aa6.57□□□□□ -1.36
LIMCH1-209ENST00000509277 LGALS1P09382 135 aaKnown RBP6.57□□□□□ -1.36
LIMCH1-209ENST00000509277 KRTAP24-1Q3LI83 254 aa6.57□□□□□ -1.36
LIMCH1-209ENST00000509277 MGAM2Q2M2H8 2515 aa6.57□□□□□ -1.36
LIMCH1-209ENST00000509277 ADARB2-AS1A8MUL3 147 aa6.56□□□□□ -1.36
LIMCH1-209ENST00000509277 F5H697 171 aa6.56□□□□□ -1.36
LIMCH1-209ENST00000509277 ZNF688P0C7X2 276 aa6.56□□□□□ -1.36
LIMCH1-209ENST00000509277 PVRIGQ6DKI7 326 aa6.56□□□□□ -1.36
LIMCH1-209ENST00000509277 RHPN1-AS1Q9BWJ2 59 aa6.56□□□□□ -1.36
LIMCH1-209ENST00000509277 SH2D1AO60880 128 aa6.56□□□□□ -1.36
LIMCH1-209ENST00000509277 TNFRSF6BO95407 300 aa6.56□□□□□ -1.36
LIMCH1-209ENST00000509277 TMEM78Q5T7P6 136 aa6.56□□□□□ -1.36
LIMCH1-209ENST00000509277 RNF182Q8N6D2 247 aa6.56□□□□□ -1.36
LIMCH1-209ENST00000509277 THAP8Q8NA92 274 aa6.56□□□□□ -1.36
LIMCH1-209ENST00000509277 LINC01619G3V211 115 aa6.56□□□□□ -1.36
LIMCH1-209ENST00000509277 NDUFV3P56181 108 aaKnown RBP6.56□□□□□ -1.36
LIMCH1-209ENST00000509277 ERCC8Q13216 396 aa6.56□□□□□ -1.36
LIMCH1-209ENST00000509277 PRIMA1Q86XR5 153 aa6.56□□□□□ -1.36
LIMCH1-209ENST00000509277 KLK5Q9Y337 293 aaPredicted RBP6.56□□□□□ -1.36
LIMCH1-209ENST00000509277 UBE2E2Q96LR5 201 aa6.55□□□□□ -1.36
LIMCH1-209ENST00000509277 FABP5P3A8MUU1 101 aa6.55□□□□□ -1.36
LIMCH1-209ENST00000509277 TCL1BO95988 128 aa6.55□□□□□ -1.36
LIMCH1-209ENST00000509277 C16orf92Q96LL3 132 aa6.55□□□□□ -1.36
LIMCH1-209ENST00000509277 PRADC1Q9BSG0 188 aa6.55□□□□□ -1.36
LIMCH1-209ENST00000509277 TRAV8-4A0A0B4J246 113 aa6.55□□□□□ -1.36
LIMCH1-209ENST00000509277 TEX49A0A1B0GTD5 131 aa6.55□□□□□ -1.36
LIMCH1-209ENST00000509277 SLC25A20O43772 301 aa6.55□□□□□ -1.36
LIMCH1-209ENST00000509277 ZNF492Q9P255 531 aa6.55□□□□□ -1.36
LIMCH1-209ENST00000509277 CRIP2P52943 208 aaPredicted RBP6.54□□□□□ -1.36
LIMCH1-209ENST00000509277 PLEKHB2Q96CS7 222 aa6.54□□□□□ -1.36
LIMCH1-209ENST00000509277 DAZ1Q9NQZ3 744 aaKnown RBP6.54□□□□□ -1.36
LIMCH1-209ENST00000509277 PROK1P58294 105 aa6.54□□□□□ -1.36
LIMCH1-209ENST00000509277 KRTAP10-3P60369 221 aa6.54□□□□□ -1.36
LIMCH1-209ENST00000509277 CFHR3Q02985 330 aa6.54□□□□□ -1.36
LIMCH1-209ENST00000509277 IGKV3D-20A0A0C4DH25 116 aa6.53□□□□□ -1.36
LIMCH1-209ENST00000509277 H7C1H1 209 aa6.53□□□□□ -1.36
LIMCH1-209ENST00000509277 C19orf54Q5BKX5 351 aa6.53□□□□□ -1.36
LIMCH1-209ENST00000509277 TEN1Q86WV5 123 aa6.53□□□□□ -1.36
LIMCH1-209ENST00000509277 EDA2RQ9HAV5 297 aa6.53□□□□□ -1.36
LIMCH1-209ENST00000509277 H3BUA1 57 aa6.53□□□□□ -1.36
LIMCH1-209ENST00000509277 SMCPP49901 116 aaPredicted RBP6.53□□□□□ -1.36
LIMCH1-209ENST00000509277 C9orf153Q5TBE3 101 aa6.53□□□□□ -1.36
LIMCH1-209ENST00000509277 ZNF256Q9Y2P7 627 aaPredicted RBP6.53□□□□□ -1.36
LIMCH1-209ENST00000509277 C19orf71A6NCJ1 209 aa6.53□□□□□ -1.36
LIMCH1-209ENST00000509277 SIGLEC15Q6ZMC9 328 aa6.53□□□□□ -1.36
LIMCH1-209ENST00000509277 OVOL1O14753 267 aa6.52□□□□□ -1.37
LIMCH1-209ENST00000509277 HTN1P15515 57 aa6.52□□□□□ -1.37
LIMCH1-209ENST00000509277 CRIP1P50238 77 aa6.52□□□□□ -1.37
LIMCH1-209ENST00000509277 FAM74A4Q5TZK3 123 aa6.52□□□□□ -1.37
LIMCH1-209ENST00000509277 CARD19Q96LW7 228 aa6.52□□□□□ -1.37
LIMCH1-209ENST00000509277 SHANK2-AS3Q9BTD1 123 aa6.52□□□□□ -1.37
LIMCH1-209ENST00000509277 MYMXA0A1B0GTQ4 84 aa6.52□□□□□ -1.37
LIMCH1-209ENST00000509277 F6UB75 175 aa6.52□□□□□ -1.37
LIMCH1-209ENST00000509277 NDUFA4O00483 81 aa6.52□□□□□ -1.37
LIMCH1-209ENST00000509277 ZFAND3Q9H8U3 227 aa6.52□□□□□ -1.37
LIMCH1-209ENST00000509277 OTORQ9NRC9 128 aa6.52□□□□□ -1.37
LIMCH1-209ENST00000509277 BRI3O95415 125 aa6.52□□□□□ -1.37
LIMCH1-209ENST00000509277 LYRM7Q5U5X0 104 aa6.52□□□□□ -1.37
LIMCH1-209ENST00000509277 C4orf3Q8WVX3 66 aa6.52□□□□□ -1.37
LIMCH1-209ENST00000509277 TMEM190Q8WZ59 177 aa6.52□□□□□ -1.37
LIMCH1-209ENST00000509277 MLST8Q9BVC4 326 aa6.52□□□□□ -1.37
LIMCH1-209ENST00000509277 NBEAL1Q6ZS30 2694 aa6.51□□□□□ -1.37
LIMCH1-209ENST00000509277 H3BRN7 92 aa6.51□□□□□ -1.37
LIMCH1-209ENST00000509277 RPL13AP40429 203 aaKnown RBP6.51□□□□□ -1.37
LIMCH1-209ENST00000509277 Q8N2B8 174 aa6.51□□□□□ -1.37
LIMCH1-209ENST00000509277 HHLA3Q9XRX5 114 aa6.51□□□□□ -1.37
LIMCH1-209ENST00000509277 NBEAL2Q6ZNJ1 2754 aa6.51□□□□□ -1.37
LIMCH1-209ENST00000509277 TRAV8-3A0A0A6YYJ7 113 aa6.51□□□□□ -1.37
LIMCH1-209ENST00000509277 WI2-2373I1.2A0A1W2PRP0 233 aa6.51□□□□□ -1.37
LIMCH1-209ENST00000509277 PSMG4Q5JS54 123 aa6.51□□□□□ -1.37
LIMCH1-209ENST00000509277 CFAP126Q5VTH2 177 aa6.51□□□□□ -1.37
LIMCH1-209ENST00000509277 IGHV7-4-1A0A0J9YVY3 117 aa6.51□□□□□ -1.37
LIMCH1-209ENST00000509277 FAM236AA0A1B0GUQ0 79 aa6.51□□□□□ -1.37
LIMCH1-209ENST00000509277 FAM236BA0A1B0GV22 79 aa6.51□□□□□ -1.37
LIMCH1-209ENST00000509277 BUB3O43684 328 aa6.51□□□□□ -1.37
LIMCH1-209ENST00000509277 ATP5LO75964 103 aa6.51□□□□□ -1.37
LIMCH1-209ENST00000509277 PMVKQ15126 192 aa6.51□□□□□ -1.37
LIMCH1-209ENST00000509277 SPATA3Q8NHX4 192 aa6.51□□□□□ -1.37
LIMCH1-209ENST00000509277 PEMTQ9UBM1 199 aa6.51□□□□□ -1.37
LIMCH1-209ENST00000509277 C2orf82Q6UX34 121 aa6.5□□□□□ -1.37
LIMCH1-209ENST00000509277 C14orf178Q8N769 122 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms