RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 TRBV7-3A0A075B6L6 115 aa7.15□□□□□ -1.26
RNF4-212ENST00000509258 TRAV1-1A0A0B4J248 108 aa7.15□□□□□ -1.26
RNF4-212ENST00000509258 PFDN1O60925 122 aa7.15□□□□□ -1.26
RNF4-212ENST00000509258 CRPP02741 224 aa7.15□□□□□ -1.26
RNF4-212ENST00000509258 S100A9P06702 114 aaKnown RBP7.15□□□□□ -1.26
RNF4-212ENST00000509258 OR5AL1P0C617 328 aa7.15□□□□□ -1.26
RNF4-212ENST00000509258 ZNF56Q15929 161 aa7.15□□□□□ -1.26
RNF4-212ENST00000509258 NTM-AS1Q6ZSK4 140 aa7.15□□□□□ -1.26
RNF4-212ENST00000509258 UBE2WQ96B02 151 aa7.15□□□□□ -1.26
RNF4-212ENST00000509258 PKHD1L1Q86WI1 4243 aa7.14□□□□□ -1.27
RNF4-212ENST00000509258 IGLC6P0CF74 106 aa7.14□□□□□ -1.27
RNF4-212ENST00000509258 SULT1A2P50226 295 aa7.14□□□□□ -1.27
RNF4-212ENST00000509258 RAB4BP61018 213 aa7.14□□□□□ -1.27
RNF4-212ENST00000509258 MPV17L2Q567V2 206 aa7.14□□□□□ -1.27
RNF4-212ENST00000509258 C1orf43Q9BWL3 253 aa7.14□□□□□ -1.27
RNF4-212ENST00000509258 C19orf71A6NCJ1 209 aa7.13□□□□□ -1.27
RNF4-212ENST00000509258 TMEM262E9PQX1 116 aa7.13□□□□□ -1.27
RNF4-212ENST00000509258 ATRAIDQ6UW56 229 aa7.13□□□□□ -1.27
RNF4-212ENST00000509258 ENHOQ6UWT2 76 aa7.13□□□□□ -1.27
RNF4-212ENST00000509258 SCXQ7RTU7 201 aa7.13□□□□□ -1.27
RNF4-212ENST00000509258 TCTE3Q8IZS6 198 aa7.13□□□□□ -1.27
RNF4-212ENST00000509258 MANBALQ9NQG1 85 aa7.13□□□□□ -1.27
RNF4-212ENST00000509258 TRBV6-8A0A0A6YYG3 113 aa7.12□□□□□ -1.27
RNF4-212ENST00000509258 TMEM97Q5BJF2 176 aa7.12□□□□□ -1.27
RNF4-212ENST00000509258 SPANXN1Q5VSR9 72 aa7.12□□□□□ -1.27
RNF4-212ENST00000509258 LRP1Q07954 4544 aaKnown RBP7.11□□□□□ -1.27
RNF4-212ENST00000509258 EIF5AP63241 154 aaKnown RBP7.11□□□□□ -1.27
RNF4-212ENST00000509258 SERTAD4-AS1Q5TG53 156 aa7.11□□□□□ -1.27
RNF4-212ENST00000509258 KRTAP26-1Q6PEX3 210 aa7.11□□□□□ -1.27
RNF4-212ENST00000509258 C15orf54Q8N8G6 183 aa7.11□□□□□ -1.27
RNF4-212ENST00000509258 OR2D3Q8NGH3 330 aa7.11□□□□□ -1.27
RNF4-212ENST00000509258 CHAC1Q9BUX1 264 aa7.11□□□□□ -1.27
RNF4-212ENST00000509258 VAX2Q9UIW0 290 aa7.11□□□□□ -1.27
RNF4-212ENST00000509258 F5H697 171 aa7.1□□□□□ -1.27
RNF4-212ENST00000509258 M0QY20 66 aa7.1□□□□□ -1.27
RNF4-212ENST00000509258 MEF2BQ02080 365 aaPredicted RBP7.1□□□□□ -1.27
RNF4-212ENST00000509258 SUMO4Q6EEV6 95 aa7.1□□□□□ -1.27
RNF4-212ENST00000509258 CLPSL2Q6UWE3 100 aa7.1□□□□□ -1.27
RNF4-212ENST00000509258 Q6ZNX1 250 aa7.1□□□□□ -1.27
RNF4-212ENST00000509258 FER1L6-AS1Q8NA97 138 aa7.1□□□□□ -1.27
RNF4-212ENST00000509258 TPPP3Q9BW30 176 aa7.1□□□□□ -1.27
RNF4-212ENST00000509258 HMCN2Q8NDA2 5059 aa7.09□□□□□ -1.27
RNF4-212ENST00000509258 K7EN84 100 aa7.09□□□□□ -1.27
RNF4-212ENST00000509258 ANGP03950 147 aaKnown RBP7.09□□□□□ -1.27
RNF4-212ENST00000509258 MGPP08493 103 aa7.09□□□□□ -1.27
RNF4-212ENST00000509258 SMIM17P0DL12 118 aa7.09□□□□□ -1.27
RNF4-212ENST00000509258 BCL2P10415 239 aa7.09□□□□□ -1.27
RNF4-212ENST00000509258 RAB5CP51148 216 aa7.09□□□□□ -1.27
RNF4-212ENST00000509258 GAGE6Q13070 117 aa7.09□□□□□ -1.27
RNF4-212ENST00000509258 C9orf62Q8N4C0 152 aa7.09□□□□□ -1.27
RNF4-212ENST00000509258 AP1S3Q96PC3 154 aa7.09□□□□□ -1.27
RNF4-212ENST00000509258 GFRA4Q9GZZ7 299 aa7.09□□□□□ -1.27
RNF4-212ENST00000509258 MED9Q9NWA0 146 aa7.09□□□□□ -1.27
RNF4-212ENST00000509258 FAT3Q8TDW7 4589 aa7.08□□□□□ -1.28
RNF4-212ENST00000509258 UBR4Q5T4S7 5183 aa7.08□□□□□ -1.28
RNF4-212ENST00000509258 GNG4P50150 75 aa7.08□□□□□ -1.28
RNF4-212ENST00000509258 KRTAP10-4P60372 401 aaPredicted RBP7.08□□□□□ -1.28
RNF4-212ENST00000509258 RBX1P62877 108 aa7.08□□□□□ -1.28
RNF4-212ENST00000509258 MIAQ16674 131 aa7.08□□□□□ -1.28
RNF4-212ENST00000509258 LYZL1Q6UWQ5 148 aa7.08□□□□□ -1.28
RNF4-212ENST00000509258 CHCHD5Q9BSY4 110 aa7.08□□□□□ -1.28
RNF4-212ENST00000509258 hCG_2014768A0A024R1R8 64 aa7.07□□□□□ -1.28
RNF4-212ENST00000509258 OXTP01178 125 aa7.07□□□□□ -1.28
RNF4-212ENST00000509258 SLC51BQ86UW2 128 aa7.07□□□□□ -1.28
RNF4-212ENST00000509258 NUDT10Q8NFP7 164 aa7.07□□□□□ -1.28
RNF4-212ENST00000509258 OCC1Q8TAD7 63 aa7.07□□□□□ -1.28
RNF4-212ENST00000509258 CIRBP-AS1Q8TBR5 109 aa7.07□□□□□ -1.28
RNF4-212ENST00000509258 NUDT11Q96G61 164 aa7.07□□□□□ -1.28
RNF4-212ENST00000509258 RNASE7Q9H1E1 156 aaKnown RBP7.07□□□□□ -1.28
RNF4-212ENST00000509258 TRBV25-1A0A075B6N4 114 aa7.06□□□□□ -1.28
RNF4-212ENST00000509258 PDE6DO43924 150 aa7.06□□□□□ -1.28
RNF4-212ENST00000509258 P01737 135 aa7.06□□□□□ -1.28
RNF4-212ENST00000509258 HLA-DQA1P01909 254 aa7.06□□□□□ -1.28
RNF4-212ENST00000509258 PRSS1P07477 247 aa7.06□□□□□ -1.28
RNF4-212ENST00000509258 CTRLP40313 264 aa7.06□□□□□ -1.28
RNF4-212ENST00000509258 NKX2-5P52952 324 aaPredicted RBP7.06□□□□□ -1.28
RNF4-212ENST00000509258 FOXA3P55318 350 aaPredicted RBP7.06□□□□□ -1.28
RNF4-212ENST00000509258 DGAT2L7PQ6IED9 249 aa7.06□□□□□ -1.28
RNF4-212ENST00000509258 C20orf203Q8NBC4 194 aa7.06□□□□□ -1.28
RNF4-212ENST00000509258 PRR34Q9NV39 138 aa7.06□□□□□ -1.28
RNF4-212ENST00000509258 IGLV4-60A0A075B6I1 120 aa7.05□□□□□ -1.28
RNF4-212ENST00000509258 TRAV26-2A0A0B4J265 109 aa7.05□□□□□ -1.28
RNF4-212ENST00000509258 USP17L23D6RBM5 183 aa7.05□□□□□ -1.28
RNF4-212ENST00000509258 H7C1H1 209 aa7.05□□□□□ -1.28
RNF4-212ENST00000509258 IFNA1P01562 189 aa7.05□□□□□ -1.28
RNF4-212ENST00000509258 NTF3P20783 257 aa7.05□□□□□ -1.28
RNF4-212ENST00000509258 RPS20P60866 119 aaKnown RBP7.05□□□□□ -1.28
RNF4-212ENST00000509258 CACNG7P62955 275 aa7.05□□□□□ -1.28
RNF4-212ENST00000509258 IQCJQ1A5X6 159 aa7.05□□□□□ -1.28
RNF4-212ENST00000509258 EIF5AL1Q6IS14 154 aaKnown RBP7.05□□□□□ -1.28
RNF4-212ENST00000509258 ALKAL2Q6UX46 152 aa7.05□□□□□ -1.28
RNF4-212ENST00000509258 LINC00269Q8N2A0 174 aa7.05□□□□□ -1.28
RNF4-212ENST00000509258 GTSF1Q8WW33 167 aa7.05□□□□□ -1.28
RNF4-212ENST00000509258 DAZAP1Q96EP5 407 aaKnown RBP7.05□□□□□ -1.28
RNF4-212ENST00000509258 SMIM12Q96EX1 92 aa7.05□□□□□ -1.28
RNF4-212ENST00000509258 PANO1I0J062 215 aa7.04□□□□□ -1.28
RNF4-212ENST00000509258 RPL37AP61513 92 aaKnown RBP7.04□□□□□ -1.28
RNF4-212ENST00000509258 CLRN3Q8NCR9 226 aa7.04□□□□□ -1.28
RNF4-212ENST00000509258 IGLV10-54A0A075B6I4 117 aa7.03□□□□□ -1.28
RNF4-212ENST00000509258 IGHV1-24A0A0C4DH33 117 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms