RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 DNAJC30Q96LL9 226 aa12.18□□□□□ -0.46
CLDND1-220ENST00000508902 DNAH8Q96JB1 4490 aa12.18□□□□□ -0.46
CLDND1-220ENST00000508902 MGPP08493 103 aa12.17□□□□□ -0.46
CLDND1-220ENST00000508902 WDR73Q6P4I2 378 aa12.17□□□□□ -0.46
CLDND1-220ENST00000508902 NTM-AS1Q6ZSK4 140 aa12.17□□□□□ -0.46
CLDND1-220ENST00000508902 DAZ4Q86SG3 579 aaKnown RBP12.17□□□□□ -0.46
CLDND1-220ENST00000508902 NIT1Q86X76 327 aa12.17□□□□□ -0.46
CLDND1-220ENST00000508902 DAZ3Q9NR90 486 aaKnown RBP12.17□□□□□ -0.46
CLDND1-220ENST00000508902 F5H697 171 aa12.16□□□□□ -0.46
CLDND1-220ENST00000508902 K7EP13 123 aa12.16□□□□□ -0.46
CLDND1-220ENST00000508902 RPL23P62829 140 aaKnown RBP12.16□□□□□ -0.46
CLDND1-220ENST00000508902 CT83Q5H943 113 aa12.16□□□□□ -0.46
CLDND1-220ENST00000508902 SPATA12Q7Z6I5 190 aa12.16□□□□□ -0.46
CLDND1-220ENST00000508902 ISOC2Q96AB3 205 aa12.16□□□□□ -0.46
CLDND1-220ENST00000508902 V9GYV3 84 aa12.16□□□□□ -0.46
CLDND1-220ENST00000508902 TRAV9-2A0A087WT02 112 aa12.15□□□□□ -0.46
CLDND1-220ENST00000508902 ERVFC1-1P60608 527 aa12.15□□□□□ -0.46
CLDND1-220ENST00000508902 C10orf126Q8N4M7 172 aa12.15□□□□□ -0.46
CLDND1-220ENST00000508902 PGLYRP4Q96LB8 373 aa12.15□□□□□ -0.46
CLDND1-220ENST00000508902 SMIM17P0DL12 118 aa12.14□□□□□ -0.47
CLDND1-220ENST00000508902 IFITM2Q01629 132 aa12.14□□□□□ -0.47
CLDND1-220ENST00000508902 DPH3P1Q9H4G8 78 aa12.14□□□□□ -0.47
CLDND1-220ENST00000508902 Q9HAA7 133 aa12.14□□□□□ -0.47
CLDND1-220ENST00000508902 OSTCQ9NRP0 149 aa12.14□□□□□ -0.47
CLDND1-220ENST00000508902 A0A087WTM6 91 aa12.13□□□□□ -0.47
CLDND1-220ENST00000508902 A0A087WWC5 75 aa12.13□□□□□ -0.47
CLDND1-220ENST00000508902 TRGC1P0CF51 173 aa12.13□□□□□ -0.47
CLDND1-220ENST00000508902 TWIST1Q15672 202 aa12.13□□□□□ -0.47
CLDND1-220ENST00000508902 TRBV6-8A0A0A6YYG3 113 aa12.12□□□□□ -0.47
CLDND1-220ENST00000508902 TRAV26-2A0A0B4J265 109 aa12.12□□□□□ -0.47
CLDND1-220ENST00000508902 LRCOL1A6NCL2 159 aa12.12□□□□□ -0.47
CLDND1-220ENST00000508902 A8MWL6 223 aa12.12□□□□□ -0.47
CLDND1-220ENST00000508902 NFE4Q86UQ8 179 aa12.12□□□□□ -0.47
CLDND1-220ENST00000508902 GATD1Q8NB37 220 aa12.12□□□□□ -0.47
CLDND1-220ENST00000508902 GAS8-AS1O95177 125 aa12.11□□□□□ -0.47
CLDND1-220ENST00000508902 WFDC2Q14508 124 aa12.11□□□□□ -0.47
CLDND1-220ENST00000508902 PEA15Q15121 130 aa12.11□□□□□ -0.47
CLDND1-220ENST00000508902 TMEM241Q24JQ0 296 aa12.11□□□□□ -0.47
CLDND1-220ENST00000508902 TSKUQ8WUA8 353 aa12.11□□□□□ -0.47
CLDND1-220ENST00000508902 HIGD1CA8MV81 97 aa12.1□□□□□ -0.47
CLDND1-220ENST00000508902 C16orf90A8MZG2 172 aa12.1□□□□□ -0.47
CLDND1-220ENST00000508902 LAGE3Q14657 143 aa12.1□□□□□ -0.47
CLDND1-220ENST00000508902 ADIRFQ15847 76 aa12.1□□□□□ -0.47
CLDND1-220ENST00000508902 FAM74A3Q4VXF1 159 aa12.1□□□□□ -0.47
CLDND1-220ENST00000508902 RASL11AQ6T310 242 aa12.1□□□□□ -0.47
CLDND1-220ENST00000508902 MAPKAPK5-AS1Q8N8E1 139 aa12.1□□□□□ -0.47
CLDND1-220ENST00000508902 DEFB104AQ8WTQ1 72 aa12.1□□□□□ -0.47
CLDND1-220ENST00000508902 NAT8Q9UHE5 227 aa12.1□□□□□ -0.47
CLDND1-220ENST00000508902 MPV17L2Q567V2 206 aa12.09□□□□□ -0.47
CLDND1-220ENST00000508902 ABCA13Q86UQ4 5058 aa12.08□□□□□ -0.48
CLDND1-220ENST00000508902 RPL39LQ96EH5 51 aaKnown RBP12.08□□□□□ -0.48
CLDND1-220ENST00000508902 GFRA4Q9GZZ7 299 aa12.08□□□□□ -0.48
CLDND1-220ENST00000508902 SMDT1Q9H4I9 107 aa12.08□□□□□ -0.48
CLDND1-220ENST00000508902 NUP35Q8NFH5 326 aa12.07□□□□□ -0.48
CLDND1-220ENST00000508902 RNF185Q96GF1 192 aa12.07□□□□□ -0.48
CLDND1-220ENST00000508902 NIT2Q9NQR4 276 aa12.07□□□□□ -0.48
CLDND1-220ENST00000508902 KLK12Q9UKR0 248 aa12.07□□□□□ -0.48
CLDND1-220ENST00000508902 PCLOQ9Y6V0 5065 aa12.06□□□□□ -0.48
CLDND1-220ENST00000508902 IQCJQ1A5X6 159 aa12.06□□□□□ -0.48
CLDND1-220ENST00000508902 Q8N976 141 aa12.06□□□□□ -0.48
CLDND1-220ENST00000508902 A0A1B0GUT8 65 aa12.05□□□□□ -0.48
CLDND1-220ENST00000508902 FAM231BA6NCW3 169 aa12.05□□□□□ -0.48
CLDND1-220ENST00000508902 H7C1H1 209 aa12.05□□□□□ -0.48
CLDND1-220ENST00000508902 FAT1Q14517 4588 aa12.04□□□□□ -0.48
CLDND1-220ENST00000508902 GAGE6Q13070 117 aa12.04□□□□□ -0.48
CLDND1-220ENST00000508902 CLLU1Q5K131 121 aa12.04□□□□□ -0.48
CLDND1-220ENST00000508902 ENHOQ6UWT2 76 aa12.04□□□□□ -0.48
CLDND1-220ENST00000508902 C15orf54Q8N8G6 183 aa12.04□□□□□ -0.48
CLDND1-220ENST00000508902 CHCHD7Q9BUK0 85 aa12.04□□□□□ -0.48
CLDND1-220ENST00000508902 SMIM27A0A1W2PRY6 76 aa12.03□□□□□ -0.48
CLDND1-220ENST00000508902 ATRAIDQ6UW56 229 aa12.03□□□□□ -0.48
CLDND1-220ENST00000508902 CHCHD5Q9BSY4 110 aa12.03□□□□□ -0.48
CLDND1-220ENST00000508902 A0A087WX48 190 aa12.02□□□□□ -0.49
CLDND1-220ENST00000508902 RPS10P46783 165 aaKnown RBP12.02□□□□□ -0.49
CLDND1-220ENST00000508902 RBX1P62877 108 aa12.02□□□□□ -0.49
CLDND1-220ENST00000508902 AMN1Q8IY45 258 aa12.02□□□□□ -0.49
CLDND1-220ENST00000508902 UBE2WQ96B02 151 aa12.02□□□□□ -0.49
CLDND1-220ENST00000508902 TMEM191AQ9H0A3 160 aa12.02□□□□□ -0.49
CLDND1-220ENST00000508902 IGHV1-24A0A0C4DH33 117 aa12.01□□□□□ -0.49
CLDND1-220ENST00000508902 TMEM262E9PQX1 116 aa12.01□□□□□ -0.49
CLDND1-220ENST00000508902 URGCP-MRPS24S4R325 110 aa12.01□□□□□ -0.49
CLDND1-220ENST00000508902 TRBV25-1A0A075B6N4 114 aa12□□□□□ -0.49
CLDND1-220ENST00000508902 TRAV8-3A0A0A6YYJ7 113 aa12□□□□□ -0.49
CLDND1-220ENST00000508902 LECT2O14960 151 aa12□□□□□ -0.49
CLDND1-220ENST00000508902 PSCAO43653 123 aa12□□□□□ -0.49
CLDND1-220ENST00000508902 RAB4AP20338 218 aa12□□□□□ -0.49
CLDND1-220ENST00000508902 KRTAP10-1P60331 282 aa12□□□□□ -0.49
CLDND1-220ENST00000508902 TMEM97Q5BJF2 176 aa12□□□□□ -0.49
CLDND1-220ENST00000508902 Q8N814 137 aa12□□□□□ -0.49
CLDND1-220ENST00000508902 C20orf203Q8NBC4 194 aa12□□□□□ -0.49
CLDND1-220ENST00000508902 IGLV4-60A0A075B6I1 120 aa11.99□□□□□ -0.49
CLDND1-220ENST00000508902 SMKR1H3BMG3 65 aa11.99□□□□□ -0.49
CLDND1-220ENST00000508902 ADCYAP1P18509 176 aa11.99□□□□□ -0.49
CLDND1-220ENST00000508902 KRTAP26-1Q6PEX3 210 aa11.99□□□□□ -0.49
CLDND1-220ENST00000508902 FRZBQ92765 325 aa11.99□□□□□ -0.49
CLDND1-220ENST00000508902 KRTAP4-5Q9BYR2 181 aa11.99□□□□□ -0.49
CLDND1-220ENST00000508902 NAT8BQ9UHF3 227 aa11.99□□□□□ -0.49
CLDND1-220ENST00000508902 TRBV6-5A0A0K0K1A5 114 aa11.98□□□□□ -0.49
CLDND1-220ENST00000508902 SDHAF1A6NFY7 115 aa11.98□□□□□ -0.49
CLDND1-220ENST00000508902 NCR2O95944 276 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms