RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 GAGE1Q13065 139 aa6.31□□□□□ -1.4
NUP54-207ENST00000508583 GAGE4Q13068 117 aa6.31□□□□□ -1.4
NUP54-207ENST00000508583 GAGE5Q13069 117 aa6.31□□□□□ -1.4
NUP54-207ENST00000508583 GAGE13Q4V321 117 aa6.31□□□□□ -1.4
NUP54-207ENST00000508583 TMEM97Q5BJF2 176 aa6.31□□□□□ -1.4
NUP54-207ENST00000508583 ZNRF2Q8NHG8 242 aa6.31□□□□□ -1.4
NUP54-207ENST00000508583 FRZBQ92765 325 aa6.31□□□□□ -1.4
NUP54-207ENST00000508583 ANAPC16Q96DE5 110 aa6.31□□□□□ -1.4
NUP54-207ENST00000508583 DNAJC30Q96LL9 226 aa6.31□□□□□ -1.4
NUP54-207ENST00000508583 LOC100131303A0A0U1RQF7 123 aa6.3□□□□□ -1.4
NUP54-207ENST00000508583 TMEM218A2RU14 115 aa6.3□□□□□ -1.4
NUP54-207ENST00000508583 LINC00862A6NCI5 91 aa6.3□□□□□ -1.4
NUP54-207ENST00000508583 F8W036 122 aa6.3□□□□□ -1.4
NUP54-207ENST00000508583 EVI2AP22794 236 aa6.3□□□□□ -1.4
NUP54-207ENST00000508583 LELP1Q5T871 98 aa6.3□□□□□ -1.4
NUP54-207ENST00000508583 Q6ZSN1 163 aa6.3□□□□□ -1.4
NUP54-207ENST00000508583 DAZ4Q86SG3 579 aaKnown RBP6.3□□□□□ -1.4
NUP54-207ENST00000508583 SEC11CQ9BY50 192 aa6.3□□□□□ -1.4
NUP54-207ENST00000508583 DAZ3Q9NR90 486 aaKnown RBP6.3□□□□□ -1.4
NUP54-207ENST00000508583 TNFRSF18Q9Y5U5 241 aa6.3□□□□□ -1.4
NUP54-207ENST00000508583 IGLV2-18A0A075B6J9 118 aa6.29□□□□□ -1.4
NUP54-207ENST00000508583 KRTAP4-8A0A0G2JLE6 195 aa6.29□□□□□ -1.4
NUP54-207ENST00000508583 NBDYA0A0U1RRE5 68 aa6.29□□□□□ -1.4
NUP54-207ENST00000508583 SMIM27A0A1W2PRY6 76 aa6.29□□□□□ -1.4
NUP54-207ENST00000508583 LINC00694P0DN24 101 aa6.29□□□□□ -1.4
NUP54-207ENST00000508583 PKIAP61925 76 aa6.29□□□□□ -1.4
NUP54-207ENST00000508583 OR10J3Q5JRS4 329 aa6.29□□□□□ -1.4
NUP54-207ENST00000508583 KCNIP4Q6PIL6 250 aa6.29□□□□□ -1.4
NUP54-207ENST00000508583 RASL11AQ6T310 242 aa6.29□□□□□ -1.4
NUP54-207ENST00000508583 C10orf126Q8N4M7 172 aa6.29□□□□□ -1.4
NUP54-207ENST00000508583 NUP35Q8NFH5 326 aa6.29□□□□□ -1.4
NUP54-207ENST00000508583 MSRB1Q9NZV6 116 aa6.29□□□□□ -1.4
NUP54-207ENST00000508583 KIF25-AS1Q9Y6Z4 181 aa6.29□□□□□ -1.4
NUP54-207ENST00000508583 M0QY20 66 aa6.28□□□□□ -1.4
NUP54-207ENST00000508583 PPP1R17O96001 155 aa6.28□□□□□ -1.4
NUP54-207ENST00000508583 NDUFA5Q16718 116 aa6.28□□□□□ -1.4
NUP54-207ENST00000508583 C1orf134Q5TEV5 83 aa6.28□□□□□ -1.4
NUP54-207ENST00000508583 SUMO4Q6EEV6 95 aa6.28□□□□□ -1.4
NUP54-207ENST00000508583 ATP5L2Q7Z4Y8 100 aa6.28□□□□□ -1.4
NUP54-207ENST00000508583 TMEM191AQ9H0A3 160 aa6.28□□□□□ -1.4
NUP54-207ENST00000508583 URGCP-MRPS24S4R325 110 aa6.28□□□□□ -1.4
NUP54-207ENST00000508583 VPS13DQ5THJ4 4388 aa6.27□□□□□ -1.4
NUP54-207ENST00000508583 IGHV3-38A0A0C4DH36 116 aa6.27□□□□□ -1.41
NUP54-207ENST00000508583 M0R2N4 97 aa6.27□□□□□ -1.41
NUP54-207ENST00000508583 DNAH10OSP0CZ25 163 aa6.27□□□□□ -1.41
NUP54-207ENST00000508583 LINC00315P59091 139 aa6.27□□□□□ -1.41
NUP54-207ENST00000508583 UBE2D3P61077 147 aa6.27□□□□□ -1.41
NUP54-207ENST00000508583 UBE2D2P62837 147 aa6.27□□□□□ -1.41
NUP54-207ENST00000508583 HBBP68871 147 aa6.27□□□□□ -1.41
NUP54-207ENST00000508583 Q6ZR54 194 aa6.27□□□□□ -1.41
NUP54-207ENST00000508583 LINC00336Q6ZUF6 198 aa6.27□□□□□ -1.41
NUP54-207ENST00000508583 NEXN-AS1Q8NBZ9 246 aa6.27□□□□□ -1.41
NUP54-207ENST00000508583 MRAP2Q96G30 205 aa6.27□□□□□ -1.41
NUP54-207ENST00000508583 CTDSP1Q9GZU7 261 aa6.27□□□□□ -1.41
NUP54-207ENST00000508583 NIT2Q9NQR4 276 aa6.27□□□□□ -1.41
NUP54-207ENST00000508583 LINC01556Q5JQF7 62 aa6.26□□□□□ -1.41
NUP54-207ENST00000508583 NFE4Q86UQ8 179 aa6.26□□□□□ -1.41
NUP54-207ENST00000508583 IMMP2LQ96T52 175 aa6.26□□□□□ -1.41
NUP54-207ENST00000508583 CHCHD7Q9BUK0 85 aa6.26□□□□□ -1.41
NUP54-207ENST00000508583 TRBV25-1A0A075B6N4 114 aa6.25□□□□□ -1.41
NUP54-207ENST00000508583 TRBV6-8A0A0A6YYG3 113 aa6.25□□□□□ -1.41
NUP54-207ENST00000508583 S100PP25815 95 aa6.25□□□□□ -1.41
NUP54-207ENST00000508583 ELOBQ15370 118 aa6.25□□□□□ -1.41
NUP54-207ENST00000508583 RHEBQ15382 184 aa6.25□□□□□ -1.41
NUP54-207ENST00000508583 C6orf223Q8N319 242 aa6.25□□□□□ -1.41
NUP54-207ENST00000508583 TMEM242Q9NWH2 141 aa6.25□□□□□ -1.41
NUP54-207ENST00000508583 CARHSP1Q9Y2V2 147 aaKnown RBP6.25□□□□□ -1.41
NUP54-207ENST00000508583 KMT2AQ03164 3969 aa6.25□□□□□ -1.41
NUP54-207ENST00000508583 TRAV9-1A0A075B6T8 112 aa6.24□□□□□ -1.41
NUP54-207ENST00000508583 A0A087WX48 190 aa6.24□□□□□ -1.41
NUP54-207ENST00000508583 ADCYAP1P18509 176 aa6.24□□□□□ -1.41
NUP54-207ENST00000508583 CAMPP49913 170 aa6.24□□□□□ -1.41
NUP54-207ENST00000508583 WFDC10BQ8IUB3 73 aa6.24□□□□□ -1.41
NUP54-207ENST00000508583 GATD1Q8NB37 220 aa6.24□□□□□ -1.41
NUP54-207ENST00000508583 BTF3L4Q96K17 158 aa6.24□□□□□ -1.41
NUP54-207ENST00000508583 Q9UF83 564 aa6.24□□□□□ -1.41
NUP54-207ENST00000508583 TRAV26-2A0A0B4J265 109 aa6.23□□□□□ -1.41
NUP54-207ENST00000508583 IGHV1-24A0A0C4DH33 117 aa6.23□□□□□ -1.41
NUP54-207ENST00000508583 NCR2O95944 276 aa6.23□□□□□ -1.41
NUP54-207ENST00000508583 PPBPP02775 128 aa6.23□□□□□ -1.41
NUP54-207ENST00000508583 RAB4AP20338 218 aa6.23□□□□□ -1.41
NUP54-207ENST00000508583 COTL1Q14019 142 aa6.23□□□□□ -1.41
NUP54-207ENST00000508583 LAGE3Q14657 143 aa6.23□□□□□ -1.41
NUP54-207ENST00000508583 C10orf91Q5T1B1 145 aa6.23□□□□□ -1.41
NUP54-207ENST00000508583 MRPL54Q6P161 138 aaKnown RBP6.23□□□□□ -1.41
NUP54-207ENST00000508583 AMN1Q8IY45 258 aa6.23□□□□□ -1.41
NUP54-207ENST00000508583 SVBPQ8N300 66 aa6.23□□□□□ -1.41
NUP54-207ENST00000508583 ST20Q9HBF5 79 aa6.23□□□□□ -1.41
NUP54-207ENST00000508583 PGPEP1Q9NXJ5 209 aa6.23□□□□□ -1.41
NUP54-207ENST00000508583 TRBV6-5A0A0K0K1A5 114 aa6.22□□□□□ -1.41
NUP54-207ENST00000508583 A0A1B0GXF2 115 aa6.22□□□□□ -1.41
NUP54-207ENST00000508583 SNAPINO95295 136 aa6.22□□□□□ -1.41
NUP54-207ENST00000508583 IQCJQ1A5X6 159 aa6.22□□□□□ -1.41
NUP54-207ENST00000508583 FAM104BQ5XKR9 115 aa6.22□□□□□ -1.41
NUP54-207ENST00000508583 NIT1Q86X76 327 aa6.22□□□□□ -1.41
NUP54-207ENST00000508583 Q8N3U1 123 aa6.22□□□□□ -1.41
NUP54-207ENST00000508583 CHCHD5Q9BSY4 110 aa6.22□□□□□ -1.41
NUP54-207ENST00000508583 TMEM243Q9BU79 118 aa6.22□□□□□ -1.41
NUP54-207ENST00000508583 TRAV8-3A0A0A6YYJ7 113 aa6.21□□□□□ -1.42
NUP54-207ENST00000508583 SDHAF1A6NFY7 115 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms