RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 ZNF56Q15929 161 aa1.38□□□□□ -2.19
DHFR-204ENST00000508282 C4orf33Q8N1A6 199 aa1.38□□□□□ -2.19
DHFR-204ENST00000508282 MYH8P13535 1937 aa1.38□□□□□ -2.19
DHFR-204ENST00000508282 PATJQ8NI35 1801 aa1.38□□□□□ -2.19
DHFR-204ENST00000508282 PHIPQ8WWQ0 1821 aa1.38□□□□□ -2.19
DHFR-204ENST00000508282 MRC2Q9UBG0 1479 aa1.37□□□□□ -2.19
DHFR-204ENST00000508282 TENM1Q9UKZ4 2725 aa1.37□□□□□ -2.19
DHFR-204ENST00000508282 CCL8P80075 99 aa1.37□□□□□ -2.19
DHFR-204ENST00000508282 ZNF818PQ6ZRF7 136 aa1.37□□□□□ -2.19
DHFR-204ENST00000508282 DSCR8Q96T75 97 aa1.37□□□□□ -2.19
DHFR-204ENST00000508282 BET1LQ9NYM9 111 aa1.37□□□□□ -2.19
DHFR-204ENST00000508282 MED12Q93074 2177 aa1.37□□□□□ -2.19
DHFR-204ENST00000508282 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.36□□□□□ -2.19
DHFR-204ENST00000508282 TRAV13-2A0A0B4J235 113 aa1.36□□□□□ -2.19
DHFR-204ENST00000508282 FAM24AA6NFZ4 105 aa1.36□□□□□ -2.19
DHFR-204ENST00000508282 ARL14EPLP0DKL9 152 aa1.36□□□□□ -2.19
DHFR-204ENST00000508282 IFITM1P13164 125 aa1.36□□□□□ -2.19
DHFR-204ENST00000508282 CCL3L1P16619 93 aa1.36□□□□□ -2.19
DHFR-204ENST00000508282 UBE2D1P51668 147 aa1.36□□□□□ -2.19
DHFR-204ENST00000508282 CPSF1Q10570 1443 aaKnown RBP1.36□□□□□ -2.19
DHFR-204ENST00000508282 KLKP1Q107X0 134 aa1.36□□□□□ -2.19
DHFR-204ENST00000508282 FAM74A4Q5TZK3 123 aa1.36□□□□□ -2.19
DHFR-204ENST00000508282 C20orf197Q8N268 126 aa1.36□□□□□ -2.19
DHFR-204ENST00000508282 ROBO1Q9Y6N7 1651 aa1.35□□□□□ -2.19
DHFR-204ENST00000508282 ARAP2Q8WZ64 1704 aa1.35□□□□□ -2.19
DHFR-204ENST00000508282 A0A1W2PPM0 123 aa1.35□□□□□ -2.19
DHFR-204ENST00000508282 TMEM218A2RU14 115 aa1.35□□□□□ -2.19
DHFR-204ENST00000508282 RBAKDNA6NC62 111 aa1.35□□□□□ -2.19
DHFR-204ENST00000508282 HCG22E2RYF7 251 aa1.35□□□□□ -2.19
DHFR-204ENST00000508282 SSBP1Q04837 148 aaKnown RBP1.35□□□□□ -2.19
DHFR-204ENST00000508282 HSD52Q0P140 79 aa1.35□□□□□ -2.19
DHFR-204ENST00000508282 C5orf38Q86SI9 138 aa1.35□□□□□ -2.19
DHFR-204ENST00000508282 AQP10Q96PS8 301 aa1.35□□□□□ -2.19
DHFR-204ENST00000508282 DOCK2Q92608 1830 aa1.35□□□□□ -2.19
DHFR-204ENST00000508282 ARFGEF1Q9Y6D6 1849 aa1.35□□□□□ -2.19
DHFR-204ENST00000508282 CASKIN1Q8WXD9 1431 aa1.34□□□□□ -2.19
DHFR-204ENST00000508282 C10orf99Q6UWK7 81 aa1.34□□□□□ -2.19
DHFR-204ENST00000508282 COX7B2Q8TF08 81 aa1.34□□□□□ -2.19
DHFR-204ENST00000508282 TMEM14BQ9NUH8 114 aa1.34□□□□□ -2.19
DHFR-204ENST00000508282 ZFYVE16Q7Z3T8 1539 aa1.34□□□□□ -2.2
DHFR-204ENST00000508282 COL6A6A6NMZ7 2263 aa1.33□□□□□ -2.2
DHFR-204ENST00000508282 DOCK1Q14185 1865 aa1.33□□□□□ -2.2
DHFR-204ENST00000508282 TCHHQ07283 1943 aa1.33□□□□□ -2.2
DHFR-204ENST00000508282 TNS1Q9HBL0 1735 aaKnown RBP1.33□□□□□ -2.2
DHFR-204ENST00000508282 TRBV7-1A0A0A6YYK4 115 aa1.33□□□□□ -2.2
DHFR-204ENST00000508282 UBE2L5PA0A1B0GUS4 154 aa1.33□□□□□ -2.2
DHFR-204ENST00000508282 SSSCA1O60232 199 aa1.33□□□□□ -2.2
DHFR-204ENST00000508282 SIX6O95475 246 aa1.33□□□□□ -2.2
DHFR-204ENST00000508282 SPINK8P0C7L1 97 aa1.33□□□□□ -2.2
DHFR-204ENST00000508282 ATP5EP56381 51 aaPredicted RBP1.33□□□□□ -2.2
DHFR-204ENST00000508282 UBE2L3P68036 154 aaKnown RBP1.33□□□□□ -2.2
DHFR-204ENST00000508282 COMMD6Q7Z4G1 85 aa1.33□□□□□ -2.2
DHFR-204ENST00000508282 LINC00312Q9Y6C7 94 aa1.33□□□□□ -2.2
DHFR-204ENST00000508282 CNTLNQ9NXG0 1405 aa1.32□□□□□ -2.2
DHFR-204ENST00000508282 TRAV30A0A087WSZ9 112 aa1.32□□□□□ -2.2
DHFR-204ENST00000508282 S100A8P05109 93 aa1.32□□□□□ -2.2
DHFR-204ENST00000508282 ELOF1P60002 83 aaKnown RBP1.32□□□□□ -2.2
DHFR-204ENST00000508282 ACBD7Q8N6N7 88 aa1.32□□□□□ -2.2
DHFR-204ENST00000508282 CCNB3Q8WWL7 1395 aa1.32□□□□□ -2.2
DHFR-204ENST00000508282 CNTRLQ7Z7A1 2325 aa1.32□□□□□ -2.2
DHFR-204ENST00000508282 LRRC37A3O60309 1634 aa1.31□□□□□ -2.2
DHFR-204ENST00000508282 DCDP81605 110 aaKnown RBP1.31□□□□□ -2.2
DHFR-204ENST00000508282 CYP4F30PQ9H0H9 118 aa1.31□□□□□ -2.2
DHFR-204ENST00000508282 V9GYV3 84 aa1.31□□□□□ -2.2
DHFR-204ENST00000508282 SPHKAPQ2M3C7 1700 aa1.31□□□□□ -2.2
DHFR-204ENST00000508282 VPS8Q8N3P4 1428 aa1.31□□□□□ -2.2
DHFR-204ENST00000508282 ROS1P08922 2347 aa1.31□□□□□ -2.2
DHFR-204ENST00000508282 SMARCA2P51531 1590 aa1.3□□□□□ -2.2
DHFR-204ENST00000508282 EDDM3BP56851 147 aa1.3□□□□□ -2.2
DHFR-204ENST00000508282 SPINK13Q1W4C9 94 aa1.3□□□□□ -2.2
DHFR-204ENST00000508282 C10orf128Q5T292 105 aa1.3□□□□□ -2.2
DHFR-204ENST00000508282 TTC9CQ8N5M4 171 aa1.3□□□□□ -2.2
DHFR-204ENST00000508282 MYOZ3Q8TDC0 251 aa1.3□□□□□ -2.2
DHFR-204ENST00000508282 DPH3P1Q9H4G8 78 aa1.3□□□□□ -2.2
DHFR-204ENST00000508282 MAP2P11137 1827 aaKnown RBP1.3□□□□□ -2.2
DHFR-204ENST00000508282 PPIP5K1Q6PFW1 1433 aa1.3□□□□□ -2.2
DHFR-204ENST00000508282 MED13LQ71F56 2210 aa1.3□□□□□ -2.2
DHFR-204ENST00000508282 ZDBF2Q9HCK1 2354 aa1.29□□□□□ -2.2
DHFR-204ENST00000508282 LOC285556D6RIA3 1793 aa1.29□□□□□ -2.2
DHFR-204ENST00000508282 CLPSL1A2RUU4 121 aa1.29□□□□□ -2.2
DHFR-204ENST00000508282 C10orf71Q711Q0 1435 aa1.29□□□□□ -2.2
DHFR-204ENST00000508282 SHROOM2Q13796 1616 aa1.29□□□□□ -2.2
DHFR-204ENST00000508282 CC2D2AQ9P2K1 1620 aa1.29□□□□□ -2.2
DHFR-204ENST00000508282 TMEM262E9PQX1 116 aa1.28□□□□□ -2.2
DHFR-204ENST00000508282 M0R143 59 aa1.28□□□□□ -2.2
DHFR-204ENST00000508282 S100A10P60903 97 aa1.28□□□□□ -2.2
DHFR-204ENST00000508282 PLAC4Q8WY50 150 aa1.28□□□□□ -2.2
DHFR-204ENST00000508282 PXDNQ92626 1479 aa1.28□□□□□ -2.2
DHFR-204ENST00000508282 ARHGAP5Q13017 1502 aa1.28□□□□□ -2.2
DHFR-204ENST00000508282 SIPA1L3O60292 1781 aaPredicted RBP1.28□□□□□ -2.2
DHFR-204ENST00000508282 ABCA1O95477 2261 aa1.28□□□□□ -2.2
DHFR-204ENST00000508282 PI4KAP42356 2102 aa1.27□□□□□ -2.21
DHFR-204ENST00000508282 LAMA4Q16363 1823 aa1.27□□□□□ -2.21
DHFR-204ENST00000508282 A0A087WTM6 91 aa1.27□□□□□ -2.21
DHFR-204ENST00000508282 H3BQ15 152 aa1.27□□□□□ -2.21
DHFR-204ENST00000508282 FXYD6P3P58550 94 aa1.27□□□□□ -2.21
DHFR-204ENST00000508282 Q8N6K4 173 aa1.27□□□□□ -2.21
DHFR-204ENST00000508282 AKAP12Q02952 1782 aa1.26□□□□□ -2.21
DHFR-204ENST00000508282 PRDM2Q13029 1718 aa1.26□□□□□ -2.21
DHFR-204ENST00000508282 ABCA3Q99758 1704 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms